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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-08 14:54:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Homo sapiens BAC clone RP11-774O3 from 4, complete sequence.
AC104825.4:132801-132818
TTGAAACTTGACCTCGGGTTCCAACTTGAC132801CTGCAGGCGGAACTGTACGTCCACACTCAGCAGTCATCGTGGAGGCAC
Homo sapiens BAC clone RP11-689P11 from 4, complete sequence.
AC105345.3:432-449
TTGAAACTTGACCTCGGGTTCCAACTTGAC432CTGCAGGCGGAACTGTACGTCCACACTCAGCAGTCATCGTGGAGGCAC
Homo sapiens DNA, chromosome 4, nearly complete genome.
AP023464.1:8406085-8406102
TTGAAACTTGACCTCGGGTTCCAACTTGAC8406085CTGCAGGCGGAACTGTACGTCCACACTCAGCAGTCATCGTGGAGGCAC
Homo sapiens isolate CHM13 chromosome 4.
CP068274.2:8431995-8432012
TTGAAACTTGACCTCGGGTTCCAACTTGAC8431995CTGCAGGCGGAACTGTACGTCCACACTCAGCAGTCATCGTGGAGGCAC
Homo sapiens isolate NA24385 chromosome 4.
CP139517.1:8455980-8455997
TTGAAACTTGACCTCGGGTTCCAACTTGAC8455980CTGCAGGCGGAACTGTACGTCCACACTCAGCAGTCATCGTGGAGGCAC
Homo sapiens isolate NA24385 chromosome 4.
CP139540.1:8459557-8459574
TTGAAACTTGACCTCGGGTTCCAACTTGAC8459557CTGCAGGCGGAACTGTACGTCCACACTCAGCAGTCATCGTGGAGGCAC
MAG: Candidatus Pristimantibacillus lignocellulolyticus isolate MAG5 chromosome, complete genome.
CP097899.1:5160665-5160682
TTGCCGACATTCCATTCCCGCTTGTTGGAG5160665CTGCAGGCGGAACTGTACCTCAAGTTGATCGAGCATTTCCGCCAAGTT
Eukaryotic synthetic construct chromosome 4.
CP034503.1:8443975-8443992
TTGAAACTTGACCTCGGGTTCCAACTTGAC8443975CTGCAGGCGGAACTGTACGTCCACACTCAGCAGTCATCGTGGAGGCAC
Eukaryotic synthetic construct chromosome 4.
CP034503.1:197208822-197208839
TTGAAACTTGACCTCGGGTTCCAACTTGAC197208822CTGCAGGCGGAACTGTACGTCCACACTCAGCAGTCATCGTGGAGGCAC
Eukaryotic synthetic construct chromosome 4.
CP034528.1:8443975-8443992
TTGAAACTTGACCTCGGGTTCCAACTTGAC8443975CTGCAGGCGGAACTGTACGTCCACACTCAGCAGTCATCGTGGAGGCAC
Eukaryotic synthetic construct chromosome 4.
CP034528.1:197208822-197208839
TTGAAACTTGACCTCGGGTTCCAACTTGAC197208822CTGCAGGCGGAACTGTACGTCCACACTCAGCAGTCATCGTGGAGGCAC
Homo sapiens clone RP11-44J16, LOW-PASS SEQUENCE SAMPLING.
AC015581.6:62319-62336
TTGAAACTTGACCTCGGGTTCCAACTTGAC62319CTGCAGGCGGAACTGTACGTCCACACTCAGCAGTCATCGTGGAGGCAC
Triticum aestivum genome assembly, chromosome: 4D.
LR862519.1:246628708-246628725
CGCGCGGATGCCACTACCATCGAGGCCCTC246628708CTGCAGGCGGAACTGTACATCCTGGACTTGAACCGAGCGGTGCTCTCA
Triticum aestivum genome assembly, chromosome: 6B.
LR862524.1:209658651-209658668
CGCGCAGATGCTGCTGCCATCGAGGCCCTC209658651CTGCAGGCGGAACTGTACGTCCTCGACTTGAACCAGGTTGTGCTCCCG
Triticum aestivum genome assembly, chromosome: 2B.
LR862533.1:246812150-246812167
CGCACGGATGCCGCTGCCATCGAGGCCCTC246812150CTGCAGGCGGAACTGTACGTCCTGGACTTGAACCGGGCGGTGCTCGCA
Triticum aestivum genome assembly, chromosome: 4D.
LR862540.1:244824715-244824732
CGCGCGGATGCCACTACCATCGAGGCCCTC244824715CTGCAGGCGGAACTGTACGTCCTGGACTTGAACCGAGCGGTGCTCTCA
Triticum aestivum genome assembly, chromosome: 4D.
LR862561.1:245456150-245456167
CGCGCGGATGCCACTACCATCGAGGCCCTC245456150CTGCAGGCGGAACTGTACGTCCTGGACTTGAACCGAGCGGTGCTCTCA
Triticum aestivum genome assembly, chromosome: 5A.
LR862562.1:234026513-234026530
CGCGCAGATGCCGCTGCCATCGAGGCCCTC234026513CTGCAGGCGGAACTGTACGTCCTCGACTTGAACCGGGGTGTGCTCTCG
Triticum aestivum genome assembly, chromosome: 4D.
LR865469.1:244398449-244398466
CGCGCGGATGCCACTACCATCGAGGCCCTC244398449CTGCAGGCGGAACTGTACGTCCTGGACTTGAACCGAGCGGTGCTCTCA
Triticum aestivum genome assembly, chromosome: 4D.
LR865490.1:242692396-242692413
CGCGCGGATGCCACTACCATCGAGGCCCTC242692396CTGCAGGCGGAACTGTACGTCCTGGACTTGAACCGAGCGGTGCTCTCA
Triticum aestivum genome assembly, chromosome: 4D.
LR865511.1:246314026-246314043
CGCGCGGATGCCACTACCATCGAGGCCCTC246314026CTGCAGGCGGAACTGTACGTCCTGGACTTGAACCGAGCGGTGCTCTCA
Triticum aestivum genome assembly, chromosome: 4D.
LR865750.1:247520009-247520026
CGCGCGGATGCCACTACCATCGAGGCCCTC247520009CTGCAGGCGGAACTGTACATCCTGGACTTGAACCGAGCGGTGCTCTCA
Triticum aestivum genome assembly, chromosome: 6B.
LR865755.1:209569286-209569303
CGCGCAGATGCTGCTGCCATCGAGGCCCTC209569286CTGCAGGCGGAACTGTACGTCCTCGACTTGAACCAGGTTGTGCTCCCG
Triticum aestivum genome assembly, chromosome: 4D.
LR865771.1:244333424-244333441
CGCGCGGATGCCACTACCATCGAGGCCCTC244333424CTGCAGGCGGAACTGTACGTCCTGGACTTGAACCGAGCGGTGCTCTCA
Triticum aestivum genome assembly, chromosome: 4D.
LR877320.1:245776628-245776645
CGCGCGGATGCCACTACCATCGAGGCCCTC245776628CTGCAGGCGGAACTGTACGTCCTGGACTTGAACCGAGCGGTGCTCTCA
Triticum aestivum genome assembly, chromosome: 4D.
LR878446.1:244757250-244757267
CGCGCGGATGCCACTACCATCGAGGCCCTC244757250CTGCAGGCGGAACTGTACGTCCTGGACTTGAACCGAGCGGTGCTCTCA
Aegilops sharonensis genome assembly, chromosome: 7S.
LR880972.1:380646159-380646176
CCCGCGGATGCCGCAGCCATCGAGGCCCTC380646159CTGCAGGCGGAACTGTACGCCCTCGACTTGAACCGGGCGGTGCTCTCG
Triticum aestivum genome assembly, chromosome: 4D.
LS992091.1:244034192-244034209
CGCGCGGATGCCACTACCATCGAGGCCCTC244034192CTGCAGGCGGAACTGTACGTCCTGGACTTGAACCGAGCGGTGCTCTCA
Triticum aestivum genome assembly, chromosome: 4D.
OU015732.1:250659458-250659475
CGCGCGGATGCCACTACCATCGAGGCCCTC250659458CTGCAGGCGGAACTGTACGTCCTGGACTTGAACCGAGCGGTGCTCTCA
Triticum aestivum genome assembly, chromosome: 4D.
OU343186.1:252498604-252498621
CGCGCGGATGCCACTACCATCGAGGCCCTC252498604CTGCAGGCGGAACTGTACATCCTGGACTTGAACCGAGCGGTGCTCTCA
Triticum aestivum genome assembly, chromosome: 4D.
OU963883.1:248529496-248529513
CGCGCGGATGCCACTACCATCGAGGCCCTC248529496CTGCAGGCGGAACTGTACGTCCTGGACTTGAACCGAGCGGTGCTCTCA
Triticum aestivum genome assembly, chromosome: 4D.
OV100748.1:246441967-246441984
CGCGCGGATGCCACTACCATCGAGGCCCTC246441967CTGCAGGCGGAACTGTACGTCCTGGACTTGAACCGAGCGGTGCTCTCA
Triticum aestivum genome assembly, chromosome: 4D.
OW530321.1:246441967-246441984
CGCGCGGATGCCACTACCATCGAGGCCCTC246441967CTGCAGGCGGAACTGTACGTCCTGGACTTGAACCGAGCGGTGCTCTCA
Triticum aestivum genome assembly, chromosome: 4D.
OX637236.1:194404030-194404047
CGCGCGGATGCCACTACCATCGAGGCCCTC194404030CTGCAGGCGGAACTGTACGTCCTGGACTTGAACCGAGCGGTGCTCTCA
Populus nigra genome assembly, chromosome: 3.
OX637674.1:248431-248448
TGTACCTTTTGCTTTGCAGTGAGTGCTTCT248431CTGCAGGCGGAACTGTACATTTCCATTGTTTGCTTGAGCTCCAGCTTC
Triticum timopheevii genome assembly, chromosome: 2At.
OY997263.1:232556476-232556493
AGAGCGGATGTCGCTCTCATCGAGGCCCTC232556476CTGCAGGCGGAACTGTACGTCCTGGACTTGAACCGGGCGGAGGAGGCT
Triticum timopheevii genome assembly, chromosome: 2G.
OY997264.1:239094665-239094682
CGCACGGATGCCGCTGCCATCGAGGCCCTC239094665CTGCAGGCGGAACTGTACGTCCTGGACTTGAACCGGGCGGTGCTCGCA
Triticum timopheevii genome assembly, chromosome: 5At.
OY997269.1:613995154-613995171
CGCGCGGATGCCGCTGCCATCGAGGCTCTC613995154CTGCAGGCGGAACTGTACGTCCTCGACTTGAACCGGGCTGTGCTCTCG
Morganella morganii strain Jiangxi chromosome, complete genome.
CP039377.1:1435776-1435793
TAATGCGCTATCTCTGCCGCTTGGTGACAC1435776CTGCAGGCGGAACTGTACTTGATCCGTTCATGGGTTCAGGTAGCACCG
Coregonus sp. 'balchen' genome assembly, chromosome: 34.
LR778286.1:35637312-35637329
AACTTTTTCCAGGTTCTTGCTGATGATGTC35637312GTACAGTTCCGCCTGCAGCACACACACACAGATGTAAACATTGATGAA
Bufo bufo genome assembly, chromosome: 3.
LR991669.1:398524733-398524750
GCAGGCCTCTTCCGGCCTGTGTCCCCGGCT398524733GTACAGTTCCGCCTGCAGCGGCCCCCGACAGAGGAACGGGGAAGGGAA
Homo sapiens clone RP11-44K20, WORKING DRAFT SEQUENCE, 22 unordered pieces.
AC023914.3:54210-54227
GTGCCTCCACGATGACTGCTGAGTGTGGAC54210GTACAGTTCCGCCTGCAGGTCAAGTTGGAACCCGAGGTCAAGTTTCAA
Homo sapiens chromosome 4 clone RP11-774O3 map 4, WORKING DRAFT SEQUENCE, 22 unordered pieces.
AC069497.2:12533-12550
GTGCCTCCACGATGACTGCTGAGTGTGGAC12533GTACAGTTCCGCCTGCAGGTCAAGTTGGAACCCGAGGTCAAGTTTCAA
Triticum aestivum genome assembly, chromosome: 5A.
LR862520.1:236024991-236025008
CGAGAGCACACCCCGGTTCAAGTCGAGGAC236024991GTACAGTTCCGCCTGCAGGAGGGCCTCGATGGCAGCGGCATCTGCGCG
Triticum aestivum genome assembly, chromosome: 5A.
LR862541.1:235577386-235577403
CGAGAGCACACCCCGGTTCAAGTCGAGGAC235577386GTACAGTTCCGCCTGCAGGAGGGCCTCGATGGCAGCGGCATCTGCGCG
Triticum aestivum genome assembly, chromosome: 5A.
LR865470.1:235355271-235355288
CGAGAGCACACCCCGGTTCAAGTCGAGGAC235355271GTACAGTTCCGCCTGCAGGAGGGCCTCGATGGCAGCGGCATCTGCGCG
Triticum aestivum genome assembly, chromosome: 5A.
LR865512.1:237738939-237738956
CGAGAGCACACCCCGGTTCAAGTCGAGGAC237738939GTACAGTTCCGCCTGCAGGAGGGCCTCGATGGCAGCGGCATCTGCGCG
Triticum aestivum genome assembly, chromosome: 5A.
LR865751.1:237303661-237303678
CGAGAGCACACCCCGGTTCAAGTCGAGGAC237303661GTACAGTTCCGCCTGCAGGAGGGCCTCGATGGCAGCGGCATCTGCGCG
Triticum aestivum genome assembly, chromosome: 5A.
LR865772.1:234260006-234260023
CGAGAGCACACCCCGGTTCAAGTCGAGGAC234260006GTACAGTTCCGCCTGCAGGAGGGCCTCGATGGCAGCGGCATCTGCGCG
Triticum aestivum genome assembly, chromosome: 5A.
LR877321.1:237899737-237899754
CGAGAGCACACCCCGGTTCAAGTCGAGGAC237899737GTACAGTTCCGCCTGCAGGAGGGCCTCGATGGCAGCGGCATCTGCGCG
Triticum aestivum genome assembly, chromosome: 5A.
LR878447.1:234708894-234708911
CGAGAGCACACCCCGGTTCAAGTCGAGGAC234708894GTACAGTTCCGCCTGCAGGAGGGCCTCGATGGCAGCGGCATCTGCGCG
Triticum aestivum genome assembly, chromosome: 5A.
LS992092.1:234340663-234340680
CGAGAGCACACCCCGGTTCAAGTCGAGGAC234340663GTACAGTTCCGCCTGCAGGAGGGCCTCGATGGCAGCGGCATCTGCGCG
Triticum turgidum subsp. durum genome assembly, chromosome: 5A.
LT934119.1:230595326-230595343
CGAGAGCACACCCCGGTTCAAGTCGAGGAC230595326GTACAGTTCCGCCTGCAGGAGGGCCTCGATGGCAGCGGCATCTGCGCG
Triticum aestivum genome assembly, chromosome: 5A.
OU015733.1:237442738-237442755
CGAGAGCACACCCCGGTTCAAGTCGAGGAC237442738GTACAGTTCCGCCTGCAGGAGGGCCTCGATGGCAGCGGCATCTGCGCG
Triticum aestivum genome assembly, chromosome: 5A.
OU343173.1:239457524-239457541
CGAGAGCACACCCCGGTTCAAGTCGAGGAC239457524GTACAGTTCCGCCTGCAGGAGGGCCTCGATGGCAGCGGCATCTGCGCG
Triticum aestivum genome assembly, chromosome: 5A.
OU963884.1:235399974-235399991
CGAGAGCACACCCCGGTTCAAGTCGAGGAC235399974GTACAGTTCCGCCTGCAGGAGGGCCTCGATGGCAGCGGCATCTGCGCG
Triticum aestivum genome assembly, chromosome: 5A.
OV100749.1:237813655-237813672
CGAGAGCACACCCCGGTTCAAGTCGAGGAC237813655GTACAGTTCCGCCTGCAGGAGGGCCTCGATGGCAGCGGCATCTGCGCG
Triticum aestivum genome assembly, chromosome: 5A.
OW530322.1:237813655-237813672
CGAGAGCACACCCCGGTTCAAGTCGAGGAC237813655GTACAGTTCCGCCTGCAGGAGGGCCTCGATGGCAGCGGCATCTGCGCG
Triticum aestivum genome assembly, chromosome: 5A.
OX637237.1:196651639-196651656
CGAGAGCACACCCCGGTTCAAGTCGAGGAC196651639GTACAGTTCCGCCTGCAGGAGGGCCTCGATGGCAGCGGCATCTGCGCG
Triticum timopheevii genome assembly, chromosome: 4At.
OY997267.1:395051004-395051021
AGCCTCTGCCGCCCGGTTCAATTCTAGGAC395051004GTACAGTTCCGCCTGCAGGAGGGCCTCGATGGCAGCGGCATCCGTGCG
Thermostichus lividus PCC 6715 chromosome, complete genome.
CP018092.1:1290838-1290855
TCGTTCCTGTAGCTCAGTTTGGGCTTTTTG1290838GTACAGTTCCGCCTGCAGGATGGCGATCGCCAATTGGGTGGAAATTTG
Morganella morganii strain KC-Tt-01 chromosome, complete genome.
CP025933.1:2444836-2444853
CGGTGCTACCTGAACCCATGAACGGATCAA2444836GTACAGTTCCGCCTGCAGGTGTCACCAAGCGGCAGAGATAGCGCATTA
Anopheles moucheti genome assembly, chromosome: 3.
OX030916.1:77426344-77426361
ACACATCTGGGACGGATCCAGCCCGGCCTG77426344GTACAGTTCCGCCTGCAGGTACAACCGTGTCTGCACGTTTTCCGAACT
Meconema thalassinum genome assembly, chromosome: 1_1.
OX336388.2:1387491860-1387491877
AATAGGGAACGGATGTTATGACGTCATGCT1387491860GTACAGTTCCGCCTGCAGACATCGATTCCACATGTTAGTCGTATATAC
Meconema thalassinum genome assembly, chromosome: 3.
OX336391.1:428590034-428590051
TGGGACGAGCGGATGTAATGACGTCATGCT428590034GTACAGTTCCGCCTGCAGACATCAATCCCACATGTTAGTAGTCTTACT
Thereva nobilitata genome assembly, chromosome: 1.
OY979694.1:191161974-191161991
CGCAGGAATCTTTCAGGTTCTTTTACGGCG191161974GTACAGTTCCGCCTGCAGGTACATTTTTTCAGGTAATACAGTTCCGCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTGCAGGCGGAACTGTAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGCAGGCGGAACTGTAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.359 | 0.351 | search_plus_done; http://172.18.8.135:50400/match?q=CTGCAGGCGGAACTGTAC&k=0&no_gap=0&offset=0&limit=50
0.483 | 0.123 | search_minus_done; http://172.18.8.135:50400/match?q=GTACAGTTCCGCCTGCAG&k=0&no_gap=0&offset=0&limit=11
0.500 | 0.018 | cgi_end;

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