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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 14:58:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Pocota personata genome assembly, chromosome: 4.
OY720432.1:81197838-81197857
TGAGGCATGAAATCGCTGTTTGGCAAAGGG81197838CTGCCGCTTCTCTCTCATCTTATTCCAAGGACGAAGATCTGGTCCGTGAA
Musa acuminata subsp. malaccensis isolate AA chromosome 8.
CP126377.1:48193897-48193916
GAGGAGGAGGAGAGGGGCACAGCGTGGGAT48193897AGATGAGAGAGAAGCGGCAGTAGACTTTGTGAAGGAACATTTTATTGCGA
Musa acuminata subsp. malaccensis isolate AA chromosome 19.
CP126388.1:47926850-47926869
GAGGAGGAGGAGGGGGGCACAGCGTGGGAT47926850AGATGAGAGAGAAGCGGCAGTAGACCTTGTGAAGGAACATTTTATTGCGA
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A08.
HG996472.1:46881946-46881965
GAGGAGGAGGAGGGGGGCACAGCGTGGGAT46881946AGATGAGAGAGAAGCGGCAGTAGACTTTGTGAAGGAACATTTTATTGCGA
Musa schizocarpa genome assembly, chromosome: S08.
LS990922.1:51463499-51463518
GAGGAGGAGGAGGGGGGCACAGCGTGGGAT51463499AGATGAGAGAGAAGCGGCAGTAGACTTTGTGAAGGAACATTTTATTGCGA
Clivina fossor genome assembly, chromosome: 5.
OZ014555.1:23791259-23791278
ACTCTGGGAAAAAGGTCAGATAAAGAAAGT23791259AGATGAGAGAGAAGCGGCAGTAGAAGAAAAAAAAACGCGAACGACAGATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTGCCGCTTCTCTCTCATCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGCCGCTTCTCTCTCATCT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.171 | 0.162 | search_plus_done; http://172.18.8.135:50400/match?q=CTGCCGCTTCTCTCTCATCT&k=0&no_gap=0&offset=0&limit=50
0.274 | 0.103 | search_minus_done; http://172.18.8.135:50400/match?q=AGATGAGAGAGAAGCGGCAG&k=0&no_gap=0&offset=0&limit=49
0.278 | 0.004 | cgi_end;

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