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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-03 19:11:01, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Calluna vulgaris genome assembly, chromosome: 5.
OZ071000.1:29382919-29382938
CCAGTCCATTCTCTCAAACCCTATCTCCCT29382919CTGCCGCTTCTCTCTCATCTCTAGCGTCTCTGCATATGGAGTCCTGGACT
Calluna vulgaris genome assembly, chromosome: 8.
OZ071003.1:2012763-2012782
ACTGCTCCTTATCTCAAGCCCTAATTTTCA2012763CTGCCGCTTCTCTCTCATCTCTAGCGTCTCTGCATCTGGACTCCTGTGCT
Calluna vulgaris genome assembly, chromosome: 1.
OZ071045.1:5870173-5870192
CCAGTCCATTCTCTCAAACCCTAATTCCCT5870173CTGCCGCTTCTCTCTCATCTCTAGCGTCTCTGCATCTGGAGTCCTGGACT
Pocota personata genome assembly, chromosome: 4.
OY720432.1:81197838-81197857
TGAGGCATGAAATCGCTGTTTGGCAAAGGG81197838CTGCCGCTTCTCTCTCATCTTATTCCAAGGACGAAGATCTGGTCCGTGAA
Musa acuminata subsp. malaccensis isolate AA chromosome 8.
CP126377.1:48193897-48193916
GAGGAGGAGGAGAGGGGCACAGCGTGGGAT48193897AGATGAGAGAGAAGCGGCAGTAGACTTTGTGAAGGAACATTTTATTGCGA
Musa acuminata subsp. malaccensis isolate AA chromosome 19.
CP126388.1:47926850-47926869
GAGGAGGAGGAGGGGGGCACAGCGTGGGAT47926850AGATGAGAGAGAAGCGGCAGTAGACCTTGTGAAGGAACATTTTATTGCGA
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A08.
HG996472.1:46881946-46881965
GAGGAGGAGGAGGGGGGCACAGCGTGGGAT46881946AGATGAGAGAGAAGCGGCAGTAGACTTTGTGAAGGAACATTTTATTGCGA
Musa schizocarpa genome assembly, chromosome: S08.
LS990922.1:51463499-51463518
GAGGAGGAGGAGGGGGGCACAGCGTGGGAT51463499AGATGAGAGAGAAGCGGCAGTAGACTTTGTGAAGGAACATTTTATTGCGA
Calluna vulgaris genome assembly, chromosome: 3.
OZ070998.1:59354051-59354070
AGTCCAGGACTCCATATGCAGAGACGCTAG59354051AGATGAGAGAGAAGCGGCAGAGGGAGATAGGGTTTGAGAGAATGGACTGG
Calluna vulgaris genome assembly, chromosome: 3.
OZ071047.1:2944993-2945012
GGAGGGAATGGACTGGCTGCTGCCTGCTGG2944993AGATGAGAGAGAAGCGGCAGTGGGACTGTGGGAATTAGGGTTTGAGGGAA
Calluna vulgaris genome assembly, chromosome: 5.
OZ071049.1:17973947-17973966
TGTTTTCCACTCCAGATGCAGAAACGCTAG17973947AGATGAGAGAGAAGCGGCAGTGGGACTGTGGGAATTAGGGTTTGAGGGAA
Calluna vulgaris genome assembly, chromosome: 5.
OZ071049.1:26603520-26603539
AGTCCAGGACTCCAGAAGCAGAGACGCTAG26603520AGATGAGAGAGAAGCGGCAGAGGGAATTAGGGTTTGAGGGAATAGACTGG
Musa banksii genome assembly, chromosome: 8.
OZ184659.1:45868475-45868494
GAGGAGGAGGAGGGGGGCACAGCGTGGGAT45868475AGATGAGAGAGAAGCGGCAGTAGACTTTGTTAAGGAACATTTTATTGCGA
Musa acuminata var. zebrina genome assembly, chromosome: 8.
OZ184682.1:45848085-45848104
GAGGAGGAGGAGGTGGGCACAGCGTGGGAT45848085AGATGAGAGAGAAGCGGCAGTAGGCTTTGTGAAGGAACATTTTATTGCGA
Musa hybrid cultivar genome assembly, chromosome: 8.
OZ185487.1:45452126-45452145
GAGTAGGAGGAGGGGGGCACAGCGTGGGAT45452126AGATGAGAGAGAAGCGGCAGTAGACTTTGTGAAGGAACATTTTATTGCGA
Musa hybrid cultivar genome assembly, chromosome: 8.
OZ185499.1:48622980-48622999
GAGGAGGAGGAGGGGGGCACAGCGTGGGAT48622980AGATGAGAGAGAAGCGGCAGTAGAATTTGTGAAGGAACATTTTATTGCGA
Musa acuminata subsp. burmannicoides genome assembly, chromosome: 2.
OZ193587.1:40861384-40861403
GAGGAGGAGGAGGGGGGCACAGCGTGGGAT40861384AGATGAGAGAGAAGCGGCAGTAGACTTTGTGAAGGAACATTTTATTGCGA
Clivina fossor genome assembly, chromosome: 5.
OZ014555.1:23791259-23791278
ACTCTGGGAAAAAGGTCAGATAAAGAAAGT23791259AGATGAGAGAGAAGCGGCAGTAGAAGAAAAAAAAACGCGAACGACAGATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTGCCGCTTCTCTCTCATCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGCCGCTTCTCTCTCATCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.217 | 0.208 | search_plus_done; http://172.18.8.135:50800/match?q=CTGCCGCTTCTCTCTCATCT&k=0&no_gap=0&offset=0&limit=50
0.367 | 0.150 | search_minus_done; http://172.18.8.135:50800/match?q=AGATGAGAGAGAAGCGGCAG&k=0&no_gap=0&offset=0&limit=46
0.377 | 0.010 | cgi_end;

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