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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:50:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Furcifer pardalis isolate Fpa_1 chromosome 5.
CP126894.1:1344512-1344530
AGCAATAAGGAATTATGCCAAAGAACCGGA1344512CTGCGTGTTGTGGTTGATGAATTATATGAGGCAAAAAGAAGATGGGCCG
uncultured Gammaproteobacteria bacterium isolate 3ffbc19d-36f3-4bc2-89c8-cf5f95be8bae genome assembly, chromosome: 1.
OX639965.1:1956525-1956543
CGCCTTCAAGGTCTCCTCGACATCGCTCCA1956525CTGCGTGTTGTGGTTGATGATGCACAGGCGAAGCGAAAAGCTGCCCTGA
Lupinus angustifolius cultivar Tanjil voucher WA chromosome LG-08.
CP023120.1:7795128-7795146
TTTGTTATGGTTTCGGTTATGGGTTCGAAG7795128CTGCGTGTTGTGGTTGATGAAAACGGCGATGTTTTTCGTGCATTGGTTG
Scutellaria galericulata genome assembly, chromosome: 3.
OX335786.1:12922540-12922558
ATTTTTCTTCTTTCATTATTTTTTATTCCG12922540CTGCGTGTTGTGGTTGATGTTGTGACATTTGACACAACATTAATCACTC
Scutellaria galericulata genome assembly, chromosome: 9.
OX335792.1:5616353-5616371
TGTTTTTCTTCTTTCATTTTTTTTATTCCG5616353CTGCGTGTTGTGGTTGATGTTATGACATTCCACACAACATTAGTCACTG
Scutellaria galericulata genome assembly, chromosome: 15.
OX335798.1:11100364-11100382
CTTTTCTTCTTTCATTTATTTTTTTTTCCA11100364CTGCGTGTTGTGGTTGATGTTGTGACATTCAGCACAACATTAGTCACTG
Scutellaria minor genome assembly, chromosome: 10.
OX940734.1:5743047-5743065
CTTTTTCTTCTTTCATTATTTTTTATTCCT5743047CTGCGTGTTGTGGTTGATGTTGTGACATTCAGTATAACATTAGTCACTG
Gibbula magus genome assembly, chromosome: 12.
OW388300.1:47027217-47027235
GTATTCATCCATCCAGACCTCAACAATACG47027217CTGCGTGTTGTGGTTGATGATACGTGCCACGCCCCCCGGCCATGAGTAC
Anopheles coustani genome assembly, chromosome: X.
OX030902.1:921024-921042
TTGCAACCGGGGGTCCTCGAGCTGGGTCGT921024CTGCGTGTTGTGGTTGATGTAGTAGGTGCCGATCTGCGAGTCGTAGCTC
Anopheles marshallii genome assembly, chromosome: X.
OX030905.1:6517809-6517827
TTGCAGCCGTGGATCCTCGAGCTGGGTCGT6517809CTGCGTGTTGTGGTTGATGTAGTAGGTACCGATCTGTGGATCGTAGCTT
Anopheles gambiae genome assembly, chromosome: X.
OX030909.1:39271-39289
TTGCAGCCGCGGATCCTCCAGCTGGGTTGT39271CTGCGTGTTGTGGTTGATGTAGTAGGTACCGATCTGTGGATCATAGCTT
Anopheles ziemanni genome assembly, chromosome: X.
OX030921.2:921024-921042
TTGCAACCGGGGGTCCTCGAGCTGGGTCGT921024CTGCGTGTTGTGGTTGATGTAGTAGGTGCCGATCTGCGAGTCGTAGCTC
Anopheles arabiensis genome assembly, chromosome: 3.
OZ001349.1:111433-111451
TTGCAGCCGCGGATCCTCCAGCTGGGTTGT111433CTGCGTGTTGTGGTTGATGTAGTAGGTACCGATCTGTGGATCATAGCTT
Hepevirus sp. isolate RtAa-HEV/JL2014 nonfunctional non-structural polyprotein gene, complete sequence; and capsid protein gene, complete cds.
KY432900.1:2345-2363
CAGCATGTTGGCATGGTGCATGCACCAGGC2345CTGCGTGTTGTGGTTGATGAGGCGCCCGCTTTTCCGCCCCATTTATTAT
Gammaproteobacteria bacterium isolate 8747c98c-8292-48b6-a6db-266d0caa829b genome assembly, chromosome: 1.
OY762933.1:1396265-1396283
CCAGGGCAGCTTTTCGCTTCGCCTGTGCAT1396265CATCAACCACAACACGCAGTGGAGCGATGTCGAGGAGACCTTGAAGGCG
Porphyra yezoensis cDNA, clone:PFL025f09_r, 5'end.
AU192094.1:299-317
CAGCAACTGCAGCAGCAGCAACAGCAGCGT299CATCAACCACAACACGCAGCTCAGCAGCCGCAAGGATCTCATGGTGCAC
Porphyra yezoensis cDNA clone:PL032c10_r, 5' end.
AV431233.1:109-127
CAGCAACTGCAGCAGCAGCAACAGCAGCGT109CATCAACCACAACACGCAGCTCAGCAGCCGCAAGGATCTCATGGTGCAC
TSA: Fagopyrum esculentum Unigene50089_laojing mRNA sequence.
JW707563.1:576-594
TCTTAGTCGGATCAGAAAGCATAGACCAAG576CATCAACCACAACACGCAGAGCGAAATCAGCAAACGGGAGATGATTATG
Scutellaria galericulata genome assembly, chromosome: 10.
OX335793.1:14711212-14711230
CAGTGACTAATGTTGTGTCGAATGTCACAA14711212CATCAACCACAACACGCAGCGTAATAAAAAAATAATGAAAAAAGAAAAA
Scutellaria galericulata genome assembly, chromosome: 12.
OX335795.1:12562592-12562610
CGGTGACTAATGTTGTGCCTAATGTCACAA12562592CATCAACCACAACACGCAGCAAAATAAAAAATGAAAGAAGAGAAACAGA
Hordeum bulbosum genome assembly, chromosome: 1H_1.
OY737460.1:252541428-252541446
ACTACAACAAAGTTTAGCTATAACATAGGC252541428CATCAACCACAACACGCAGGCCAAATAAGTTTATGGCACGCGGACCATC
Hordeum bulbosum genome assembly, chromosome: 1H_2.
OY737467.1:234006479-234006497
ACTACAACAAAGTTTAGCTATAACATAGGC234006479CATCAACCACAACACGCAGGCCAAATAAGTTTATGGCACGCGGACCATC
Hordeum bulbosum genome assembly, chromosome: 1H_3.
OY737474.1:248867176-248867194
ACTACAACAAAGTTTAGCTATAACATAGGC248867176CATCAACCACAACACGCAGGCCAAATAAGTTTATGGCACGCGGACCATC
Hordeum bulbosum genome assembly, chromosome: 1H_4.
OY737481.1:244230627-244230645
ACTACAACAAAGTTTAGCTATAACATAGGC244230627CATCAACCACAACACGCAGGCCAAATAAGTTTATGGCACGCGGACCATC
Hordeum bulbosum genome assembly, chromosome: 1H_3.
OY737503.1:230002127-230002145
ACTACAACAAAGTTTAGCTATAACATAGGC230002127CATCAACCACAACACGCAGGCCAAATAAGTTTATGGCACGCGGACCATC
Hordeum bulbosum genome assembly, chromosome: 1H_4.
OY737510.1:232196993-232197011
ACTACAACAAAGTTTAGCTATAACATAGGC232196993CATCAACCACAACACGCAGGCCAAATAAGTTTATGGCACGCGGACCATC
Hordeum bulbosum genome assembly, chromosome: 1H_2.
OY737525.1:237496215-237496233
ACTACAACAAAGTTTAGCTATAACATAGGC237496215CATCAACCACAACACGCAGGCCAAATAAGTTTATGGCACGCGGACCATC
Hordeum bulbosum genome assembly, chromosome: 1H_4.
OY737539.1:237305762-237305780
ACTACAACAAAGTTTAGCTATAACATAGGC237305762CATCAACCACAACACGCAGGCCAAATAAGTTTATGGCACGCGGACCATC
Hordeum bulbosum genome assembly, chromosome: 1H_3.
OY737625.1:255675167-255675185
ACTACAACAAAGTTTAGCTATAACATAGGC255675167CATCAACCACAACACGCAGGCCAAATAAGTTTATGGCACGCGGACCATC
Hordeum bulbosum genome assembly, chromosome: 1H_1.
OY737640.1:254451953-254451971
ACTACAACAAAGTTTAGCTATAACATAGGC254451953CATCAACCACAACACGCAGGCCAAATAAGTTTATGGCACGCGGACCATC
Hordeum bulbosum genome assembly, chromosome: 1H_2.
OY737647.1:230065595-230065613
ACTACAACAAAGTTTAGCTATAACATAGGC230065595CATCAACCACAACACGCAGGCCAAATAAGTTTATGGCACGCGGACCATC
Hordeum bulbosum genome assembly, chromosome: 1H_3.
OY737654.1:250032891-250032909
ACTACAACAAAGTTTAGCTATAACATAGGC250032891CATCAACCACAACACGCAGGCCAAATAAGTTTATGGCACGCGGACCATC
Hordeum bulbosum genome assembly, chromosome: 1H_4.
OY737661.1:229086579-229086597
ACTACAACAAAGTTTAGCTATAACATAGGC229086579CATCAACCACAACACGCAGGCCAAATAAGTTTATGGCACGCGGACCATC
Hordeum bulbosum genome assembly, chromosome: 1H_1.
OY737866.1:239089237-239089255
ACTACAACAAAGTTTAGCTATAACATAGGC239089237CATCAACCACAACACGCAGGCCAAATAAGTTTATGGCACGCGGACCATC
Hordeum bulbosum genome assembly, chromosome: 1H_3.
OY737880.1:249553732-249553750
ACTACAACAAAGTTTAGCTATAACATAGGC249553732CATCAACCACAACACGCAGGCCAAATAAGTTTATGGCACGCGGACCATC
Hordeum bulbosum genome assembly, chromosome: 1H_4.
OY737887.1:254542127-254542145
ACTACAACAAAGTTTAGCTATAACATAGGC254542127CATCAACCACAACACGCAGGCCAAATAAGTTTATGGCACGCGGACCATC
Euproctis similis genome assembly, chromosome: 11.
LR990114.1:1177154-1177172
CGTTGGTTGACAAAATCTCTGATGCACAGC1177154CATCAACCACAACACGCAGTGATCGTTCACTCAGGAAGTCCCTTATCCA
Anopheles maculipalpis genome assembly, chromosome: X.
OX030897.1:14061550-14061568
AAGCTATGATCCACAGATCGGTACGTACTA14061550CATCAACCACAACACGCAGACGACCCAGCTCGAGGATCCGCGGCTACAA
Anopheles darlingi genome assembly, chromosome: X.
OX030913.1:6109976-6109994
GAGTTACGATCCACAGATTGGGACGTACTA6109976CATCAACCACAACACGCAGTCGACGCAGCTGGAGGACCCGCGATTGCAA
Anopheles moucheti genome assembly, chromosome: X.
OX030917.1:5601584-5601602
AAGCTATGATCCACAGATCGGTACGTACTA5601584CATCAACCACAACACGCAGACGACCCAGCTCGAGGATCCACGGCTGCAA
Magallana gigas genome assembly, chromosome: 10.
OY970754.1:4084279-4084297
CTACTCCTGGCCGGGGGGCGTGGCTCGCAT4084279CATCAACCACAACACGCAGCGAATCGTGGAGGTCTGGATGGACGAATAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTGCGTGTTGTGGTTGATG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGCGTGTTGTGGTTGATG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.185 | 0.177 | search_plus_done; http://172.18.8.135:50400/match?q=CTGCGTGTTGTGGTTGATG&k=0&no_gap=0&offset=0&limit=50
0.333 | 0.147 | search_minus_done; http://172.18.8.135:50400/match?q=CATCAACCACAACACGCAG&k=0&no_gap=0&offset=0&limit=36
0.351 | 0.018 | cgi_end;

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