GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-20 14:02:18, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Polytrichum commune genome assembly, chromosome: 5.
OX485807.1:29307248-29307267
GGATACAGTTCCATACAAAGCAACAAGAAA29307248CTGCTCAAGATGTTCGTCCACAAAATACTGGAGGTGTCTTGTTTTGATAG
Blastomussa wellsi genome assembly, chromosome: 9.
OX393569.1:22388582-22388601
ACAAGAATTCAAGTCAACCTTCAAAACAAC22388582CTGCTCAAGATGTTCGTCCATCCTCAAAATTCCCACAGAAACTCTCTCAG
Lotus japonicus genomic DNA, chromosome 5, clone: LjT23J23, TM0428.
AP009974.1:30641-30660
ATTTTGGTCGCTTCAATTTGCAGTGCCAAG30641TGGACGAACATCTTGAGCAGGTTCATTATCTTCTTAATAAGACAATACAA
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:11266631-11266650
ATTTTGGTCGCTTCAATTTGCAGTGCCAAG11266631TGGACGAACATCTTGAGCAGGTTCATTATCTTCTTAATAAGACAATACAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTGCTCAAGATGTTCGTCCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGCTCAAGATGTTCGTCCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.109 | 0.100 | search_plus_done; http://172.18.8.135:50400/match?q=CTGCTCAAGATGTTCGTCCA&k=0&no_gap=0&offset=0&limit=50
0.136 | 0.027 | search_minus_done; http://172.18.8.135:50400/match?q=TGGACGAACATCTTGAGCAG&k=0&no_gap=0&offset=0&limit=48
0.137 | 0.001 | cgi_end;

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