GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 08:25:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Callorhinchus milii clone IMCB_Eshark-59E18, complete sequence.
AC238494.3:146564-146583
TTTAAAAAAAATGAACTGTGCACAAACTGG146564CTGCTGTGTTTGCCTACAACTACACAGTCACTACAGTAAAATATAGTGAA
Pelobates cultripes genome assembly, chromosome: 06.
OW240917.1:36237359-36237378
TCAGTTAGAAATTTAATTTTTAAAGTTTAA36237359GTTGTAGGCAAACACAGCAGCAGTAGGAGAAATTGAGTGACAAAGAAATT
Larus fuscus genome assembly, chromosome: Z.
OZ010757.1:27028342-27028361
TGCTTTTTAAAAAAGTCTCCAGAATTATGT27028342GTTGTAGGCAAACACAGCAGACACAGAACAGCCAGGTCAGGATAACACAA
CSATR1JP-T3-019_G03_3DEC2008_010 CSATR1JP Cannabis sativa cDNA, mRNA sequence.
JK495425.1:53-72
TACGACAAAAAGCATAAAAAAATAGTAGTT53GTTGTAGGCAAACACAGCAGCAGCCAGAGTACTGTAGCGTAACATTTGTT
TSA: Cannabis sativa PK04195.1_1.CasaPuKu mRNA sequence.
JP450183.1:5-24
AGTT5GTTGTAGGCAAACACAGCAGCAGCCAGAGTACTGTAGCGTAACATTTGTT
Platycnemis pennipes genome assembly, chromosome: 5.
OW121851.1:135922644-135922663
AGTCGGAGGCACCAAGTAGGCACGTCAAGT135922644GTTGTAGGCAAACACAGCAGATCCGAAAGATTGCCCCAGATCTTGAGACA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTGCTGTGTTTGCCTACAAC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGCTGTGTTTGCCTACAAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.118 | 0.109 | search_plus_done; http://172.18.8.135:50400/match?q=CTGCTGTGTTTGCCTACAAC&k=0&no_gap=0&offset=0&limit=50
0.265 | 0.148 | search_minus_done; http://172.18.8.135:50400/match?q=GTTGTAGGCAAACACAGCAG&k=0&no_gap=0&offset=0&limit=49
0.269 | 0.003 | cgi_end;

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