GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 15:40:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

RCRAG22TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRAG22, mRNA sequence.
EG682164.1:482-503
ACCGGCAGATCCAAGGGCTACGGTTTTGTA482ACTTTTCGAGATCCTGAAGCAGCCATGAGGGCCTGTGTTGATTCTGCTCCTG
RCRA282TPB Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRA282, mRNA sequence.
EG684662.1:223-244
AAAATGTGCTGTTTCTATATATGTTAGGTA223ACTTTTCGAGATCCTGAAGCAGCCATGAGGGCCTGTGTTGATTCTGCTCCTG
RCSBS91TP Castor bean cDNA library from seeds (12-33 days after pollination), 1.4 kb Ricinus communis cDNA clone RCSBS91, mRNA sequence.
EG695933.1:493-514
ACCGGCAGATCCAAGGGCTACGGTTTTGTA493ACTTTTCGAGATCCTGAAGCAGCCATGAGGGCCTGTGTTGATTCTGCTCCTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTGCTTCAGGATCTCGAAAAGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGCTTCAGGATCTCGAAAAGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.094 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=CTGCTTCAGGATCTCGAAAAGT&k=0&no_gap=0&offset=0&limit=50
0.287 | 0.194 | search_minus_done; http://172.18.8.135:50400/match?q=ACTTTTCGAGATCCTGAAGCAG&k=0&no_gap=0&offset=0&limit=50
0.290 | 0.002 | cgi_end;

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