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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:08:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Erithacus rubecula genome assembly, chromosome: 5.
LR812107.1:5205707-5205726
ACTGCAATGCCTGGAAATGCAGTATTGTCT5205707CTGGAAAGGATTGAAGCAGGAATGTGGCACACCAAAGCACCATGCTCTTC
TSA: Musa acuminata AAA Group Unigene67956_B1 mRNA sequence.
JV316671.1:37-56
GGTTGGAAGAGGAAGACAAGGCTGGAAGTC37CTGGAAAGGATTGAAGCAGGCACATAACCGTAGGTCTACCATTTTCCTCG
TSA: Musa acuminata AAA Group Unigene100028_NK1 mRNA sequence.
JV432323.1:1476-1495
GGTTGGAAGAGGAAGACAAGGCTGGAAGTC1476CTGGAAAGGATTGAAGCAGGCACATAACCGTAGGTCTACCATTTTCCTC
Musa troglodytarum cultivar karat chromosome 4.
CP097506.1:41823700-41823719
GGTTGGAAGAGAAAGACAAGGCTGGAAGTC41823700CTGGAAAGGATTGAAGCAGGCACATAAGCGTAGGTCTACCATTTTCCTCA
Musa acuminata subsp. malaccensis isolate AA chromosome 4.
CP126373.1:31803174-31803193
GGTTGGAAGAGGAAGACAAGGCTGGAAGTC31803174CTGGAAAGGATTGAAGCAGGCACATAACCGTAGGTCTACTATTTTCCTCG
Musa acuminata subsp. malaccensis isolate AA chromosome 15.
CP126384.1:31817307-31817326
GGTTGGAAGAGGAAGACAAGGCTGGAAGTC31817307CTGGAAAGGATTGAAGCAGGCACATAACCGTAGGTCTACCATTTTCCTCG
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A04.
HG996469.1:31117525-31117544
GGTTGGAAGAGGAAGACAAGGCTGGAAGTC31117525CTGGAAAGGATTGAAGCAGGCACATAACCGTAGGTCTACCATTTTCCTCG
Musa schizocarpa genome assembly, chromosome: S04.
LS990918.1:35172976-35172995
GGTTGGAAGAGGAAGACAAGGCTGGAAGTC35172976CTGGAAAGGATTGAAGCAGGCACATAACCGTAGGTCTACCATTTTCCTCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTGGAAAGGATTGAAGCAGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGGAAAGGATTGAAGCAGG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.194 | 0.185 | search_plus_done; http://172.18.8.135:50400/match?q=CTGGAAAGGATTGAAGCAGG&k=0&no_gap=0&offset=0&limit=50
0.287 | 0.093 | search_minus_done; http://172.18.8.135:50400/match?q=CCTGCTTCAATCCTTTCCAG&k=0&no_gap=0&offset=0&limit=42
0.287 | 0.000 | cgi_end;

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