GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 19:38:23, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Camellia sinensis Singletons25690.Casi mRNA sequence.
HP740102.1:73-92
TGAAGTGGTTGAAGTGAAGGAAGCTCGAGT73CTGGAGCGAGATGCAGAAGCCTACTCTCATGAGGCGGAGATTTTAGAGAG
TSA: Camellia sinensis tea_rep_c2420 mRNA sequence.
KA281851.1:662-681
TGAAGTGGTTGAAGTGAAGGAAGCTCGAGT662CTGGAGCGAGATGCAGAAGCCTACTCTCATGAGGCGGAGATTTTAGAGAG
TSA: Camellia sinensis tea_s22763 mRNA sequence.
KA301220.1:221-240
TGAAGTTGTTGAAGTGAAGGAAGCTCGAGT221CTGGAGCGAGATGCAGAAGCCTACTCTCATGAGGCGGAGATTTTAGAGAG
Cordyceps fumosorosea genome assembly, chromosome: 8.
OY756927.1:2004649-2004668
CGTCTATGATGACTGGAACTTTGTCAACAC2004649CTGGAGCGAGATGCAGAAGCTCGTCGGTACCGGCAAGGTCCGCAACATTG
MAG: Flavobacterium sp. JAD_PAG50586_2 chromosome, complete genome.
CP096136.1:3714070-3714089
AACCATTCCAATATTGGGGCAAACGGACTA3714070GCTTCTGCATCTCGCTCCAGCTTTTCAATTTTAGGAAAATAAACCGGAAA
ESTFullTSD1_315 ESTFullTSD1 Camellia sinensis var. assamica cDNA clone A487 5', mRNA sequence.
GH709869.1:318-337
CTCTCTAAAATCTCCGCCTCATGAGAGTAG318GCTTCTGCATCTCGCTCCAGACTCCAGCTTCCTTCACTTCAACCACTTCA
Lasioglossum lativentre genome assembly, chromosome: 3.
OU744357.1:13767071-13767090
GCCCGCGCGTCTGCCAGCCTGCCTGCTCCT13767071GCTTCTGCATCTCGCTCCAGTCTTATCCTGCTTGACAACCGGTGGCGAGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTGGAGCGAGATGCAGAAGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGGAGCGAGATGCAGAAGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.293 | 0.284 | search_plus_done; http://172.18.8.135:50400/match?q=CTGGAGCGAGATGCAGAAGC&k=0&no_gap=0&offset=0&limit=50
0.442 | 0.149 | search_minus_done; http://172.18.8.135:50400/match?q=GCTTCTGCATCTCGCTCCAG&k=0&no_gap=0&offset=0&limit=46
0.444 | 0.002 | cgi_end;

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