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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:07:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Trifolium pratense DNA, clone:RCG08491.
DE217866.1:65-84
ACCTGAGTTTAGTTTCCCTCCTAGTTCGGC65CTGGCAATCGTTTGACTTTGCGGGGTTTGTCACTATCCTCACTCATGCTT
Trifolium pratense DNA, clone:RCG08743.
DE218076.1:65-84
ACCTGAGTTTAGTTTCCCTCCTAGTTCGGC65CTGGCAATCGTTTGACTTTGCGGGGTTTGTCACTATCCTCACTCATGCTT
Trifolium pratense DNA, clone:RCG09244.
DE218495.1:65-84
ACCTGAGTTTAGTTTCCCTCCTAGTTCGGC65CTGGCAATCGTTTGACTTTGCGGGGTTTGTCACTATCCTCACTCATGCTT
Trifolium pratense DNA, clone:RCG09319.
DE218559.1:65-84
ACCTGAGTTTAGTTTCCCTCCTAGTTCGGC65CTGGCAATCGTTTGACTTTGCGGGGTTTGTCACTATCCTCACTCATGCTT
Trifolium pratense DNA, clone:RCG10883.
DE219901.1:65-84
ACCTGAGTTTAGTTTCCCTCCTAGTTCGGC65CTGGCAATCGTTTGACTTTGCGGGGTTTGTCACTATCCTCACTCATGCTT
Trifolium pratense DNA, clone:RCG11694.
DE220588.1:65-84
ACCTGAGTTTAGTTTCCCTCCTAGTTCGGC65CTGGCAATCGTTTGACTTTGCGGGGTTTGTCACTATCCTCACTCATGCTT
Trifolium pratense DNA, clone:RCG12881.
DE221606.1:65-84
ACCTGAGTTTAGTTTCCCTCCTAGTTCGGC65CTGGCAATCGTTTGACTTTGCGGGGTTTGTCACTATCCTCACTCATGCTT
Trifolium pratense DNA, clone:RCG14945.
DE223309.1:65-84
ACCTGAGTTTAGTTTCCCTCCTAGTTCGGC65CTGGCAATCGTTTGACTTTGCGGGGTTTGTCACTATCCTCACTCATGCTT
Trifolium pratense DNA, clone:RCG16062.
DE224247.1:54-73
ACCTGAGTTTAGTTTCCCTCCTAGTTCGGC54CTGGCAATCGTTTGACTTTGCGGGGTTTGTCACTATCCTCACTCATGCTT
Trifolium repens isolate ACLI19 chromosome 08_0cc.
CP125850.1:51692307-51692326
ACCTCAGTTTAGTTTCTCTCCTAGTTCGGC51692307CTGGCAATCGTTTGACTTTGCGGGGTTTGTCACTATCCTCACTCATGCTT
Trifolium repens isolate ACLI19 chromosome 08_Pall.
CP125851.1:44626225-44626244
ACCTGAGTTTAGTTTCTCTCCTAGTTCGGC44626225CTGGCAATCGTTTGACTTTGCGGGGTTTGTCACTATCCTCACTCATGCTT
Trifolium pratense DNA, clone:RCG11271.
DE220233.1:120-139
AAGCATGAGTGAGGATAGTGACAAACCCCG120CAAAGTCAAACGATTGCCAGGCCGAACTAGGAGGGAAACTAAACTCAGGT
Trifolium pratense DNA, clone:RCG15295.
DE223597.1:134-153
AAGCATGAGTGAGGATAGTGACAAACCCCA134CAAAGTCAAACGATTGCCAGGCCGAACTAGGAGGGAAACTAAACTCAGGT
TP_ABa0007F01.r TP_ABa Trifolium pratense genomic clone TP_ABa0007F01 3', genomic survey sequence.
HR239820.1:647-666
AAGCATGAGTGAGGATAGTGACAAACCCCG647CAAAGTCAAACGATTGCCAGGCCGAACTAGGAGGGAAACTAAACTCAGGT
Trifolium pratense mRNA for aminoacyl-tRNA synthetase, complete cds.
AB234882.1:1794-1813
AAGCATGAGTGAGGATAGTGACAAACCCCG1794CAAAGTCAAACGATTGCCAGGCCGAACTAGGAGGGAAACTAAACTCAGGT
Cicer arietinum chromosome Ca7.
CP039337.1:8958498-8958517
AAGCATGAGTGAGGATAGTGACAAACCCCG8958498CAAAGTCAAACGATTGCCAGGCCGAACTAGGAGGCAAACGAAACTCAGGT
Cicer arietinum chromosome Ca7.
CP040772.1:8958514-8958533
AAGCATGAGTGAGGATAGTGACAAACCCCG8958514CAAAGTCAAACGATTGCCAGGCCGAACTAGGAGGCAAACGAAACTCAGGT
Trifolium subterraneum genome assembly, chromosome: 4.
OX637464.1:11212127-11212146
AAGCATGAGTGAGGATAGTGACAAACCCCG11212127CAAAGTCAAACGATTGCCAGGACGAACTAGGAGGGAAACGAAACTCAGGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTGGCAATCGTTTGACTTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGGCAATCGTTTGACTTTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.293 | 0.284 | search_plus_done; http://172.18.8.135:50400/match?q=CTGGCAATCGTTTGACTTTG&k=0&no_gap=0&offset=0&limit=50
0.464 | 0.171 | search_minus_done; http://172.18.8.135:50400/match?q=CAAAGTCAAACGATTGCCAG&k=0&no_gap=0&offset=0&limit=39
0.469 | 0.005 | cgi_end;

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