GGGenome | Results

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2025-04-12 03:49:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Sylvilagus floridanus genome assembly, chromosome: 18.
OX463240.1:13156978-13156997

ACCAGGGCTTTAACCCGCTGTGTGACAGCG13156978CTGGTCCCTCTCCCAGTCTTACCTACTGAGGAAATCAGTGATTTTGAACA

Rhinatrema bivittatum genome assembly, chromosome: 4.
LR584390.1:449665968-449665987

TGTCTGCCAATCTCAAATAACTCAAAGTTT449665968CTGGTCCCTCTCCCAGTCTTGGTGGCACATCAATCGTCTAGAAGCCCGAG

Rhinatrema bivittatum genome assembly, chromosome: 8.
LR584394.1:80597806-80597825

CATCTTCCAATCTCAAACGACTCAAGGTTT80597806CTGGTCCCTCTCCCAGTCTTGGTGGCACATCAATCGTTTAGAAGCCCGAG

Apodemus sylvaticus genome assembly, chromosome: 6.
OX359303.1:31286812-31286831

CTCACACAGTTTTGGAGAGTAGGAAGGTTC31286812AAGACTGGGAGAGGGACCAGCAGAACTTGTGTTTGGTGAGAACCTGCTTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.165 | 0.156 | search_plus_done; http://172.18.8.135:50400/match?q=CTGGTCCCTCTCCCAGTCTT&k=0&no_gap=0&offset=0&limit=50
0.253 | 0.087 | search_minus_done; http://172.18.8.135:50400/match?q=AAGACTGGGAGAGGGACCAG&k=0&no_gap=0&offset=0&limit=47
0.254 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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