GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 08:01:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

GQ0168.B3_E16 GQ016: Primary, secondary SHOOT -N fertil. Treatments Picea glauca cDNA clone GQ0168_E16 5', mRNA sequence.
CO481015.2:816-835
AGGCTGTTGAGGGTATGGCTGTGGAACAAC816CTGGTGCTAGAGAGAATGTAAGCTATCTCA
GQ0166.B3_D20 GQ016: Primary, secondary SHOOT -N fertil. Treatments Picea glauca cDNA clone GQ0166_D20 5', mRNA sequence.
CO481302.2:815-834
AGGCTGTTGAGGGTATGGCTGTGGAACAAC815CTGGTGCTAGAGAGAATGTAAGCTATCTCAGGGTGACAGAACAACGACAA
GQ0166.B3_F02 GQ016: Primary, secondary SHOOT -N fertil. Treatments Picea glauca cDNA clone GQ0166_F02 5', mRNA sequence.
CO481718.2:815-834
AGGCTGTTGAGGGTATGGCTGTGGAACAAC815CTGGTGCTAGAGAGAATGTAAGCTATCTCAGGGTGACAGAACAACGACAA
GQ03211.B7_N02 GQ032 - Shoot tip (Normalized library) Picea glauca cDNA clone GQ03211_N02 5', mRNA sequence.
EX366523.1:249-268
AGGCTGTAGAGGGTATGACTGTTGAACAAC249CTGGTGCTAGAGAGAATGTAAGCTATCTCAGGGTGACTGAACAACGACAA
GQ0168.B7P4_E16 GQ016: Primary, secondary SHOOT -N fertil. Treatments Picea glauca cDNA clone GQ0168_E16 N', mRNA sequence.
GT739868.1:62-81
AGGCTGTTGAGGGTATGGCTGTGGAACAAC62CTGGTGCTAGAGAGAATGTAAGCTATCTCAGGGTGACAGAACAACGACNA
Picea glauca clone GQ0168_E16 mRNA sequence.
BT102190.1:815-834
AGGCTGTTGAGGGTATGGCTGTGGAACAAC815CTGGTGCTAGAGAGAATGTAAGCTATCTCAGGGTGACAGAACAACGACNA
Picea glauca clone GQ03211_N02 mRNA sequence.
BT109727.1:249-268
AGGCTGTAGAGGGTATGACTGTTGAACAAC249CTGGTGCTAGAGAGAATGTAAGCTATCTCAGGGTGACTGAACAACGACAA
Phlogophora meticulosa genome assembly, chromosome: 3.
LR990520.1:9971219-9971238
CTTATATTTGTGATTATCATTTCAAGACAA9971219CTGGTGCTAGAGAGAATGTAATCCATTTGGCTCGCACACCTGAAGAGAAA
Ceramica pisi genome assembly, chromosome: 7.
OY982534.1:14243917-14243936
CAGCAATTTATGGTTATTATTTCAAGACAA14243917CTGGTGCTAGAGAGAATGTAATCCATCTGGCACGAACACCTGATGAGAAA
WS00828.B21_A01 WS-X-N-A-9 Picea glauca cDNA clone WS00828_A01 3, mRNA sequence.
DR590231.1:477-496
TTGTCGTTGTTCAGTCACCCTGAGATAGCT477TACATTCTCTCTAGCACCAGGTTGTTCAACAGTCATACCCTCTACAGCCT
GQ03211.SP6_N02 GQ032 - Shoot tip (Normalized library) Picea glauca cDNA clone GQ03211_N02 3', mRNA sequence.
EX366892.1:781-800
TTGTCGTTGTTCAGTCACCCTGAGATAGCT781TACATTCTCTCTAGCACCAGGTTGGTCAACAGTCATACCCTCTACAGCCT
Emmelina monodactyla genome assembly, chromosome: 8.
OU745308.1:651671-651690
AATGTACTTTTGAAATAAAATGTATTAAAA651671TACATTCTCTCTAGCACCAGCAAGCTATGTTTAATTAAAAAACGCGACAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTGGTGCTAGAGAGAATGTA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGGTGCTAGAGAGAATGTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.622 | 0.614 | search_plus_done; http://172.18.8.135:50400/match?q=CTGGTGCTAGAGAGAATGTA&k=0&no_gap=0&offset=0&limit=50
0.820 | 0.198 | search_minus_done; http://172.18.8.135:50400/match?q=TACATTCTCTCTAGCACCAG&k=0&no_gap=0&offset=0&limit=41
0.822 | 0.002 | cgi_end;

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