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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 12:52:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

BJ02025F04 BJ02 Capsicum annuum cDNA 5', mRNA sequence.
CO907985.1:146-166
ATTTGCAGAATGGCTTGTGCAACATACATC146CTGGTTAAGAGGGCGTCACATAATTGAGCTAGGCAGTGGCACTGGAGCTTT
Solanum melongena mRNA, clone: YFR04I04, 5'end, expressed in fruit at 2w after anthesis.
FS096656.1:231-251
ATTTGCAGAATGGCTTGCACAACATACATC231CTGGTTAAGAGGGCGTCACATAATTGAGCTAGGCAGTGGAACTGGAGCTTT
KS21005C04 KS21 Capsicum annuum cDNA, mRNA sequence.
GD099635.1:238-258
ATTTGCAGAATGGCTTGTGCAACATACATC238CTGGTTAAGAGGGCGTCACATAATTGAGCTAGGCAGTGGCACTGGAGCTTT
KS22004H04 KS22 Capsicum annuum cDNA, mRNA sequence.
GD105425.1:223-243
ATTTGCAGAATGGCTTGTGCAACATACATC223CTGGTTAAGAGGGCGTCACATAATTGAGCTAGGCAGTGGCACTGGAGCTTT
TSA: Capsicum annuum MGMT_Contig34013 mRNA sequence.
JW084257.1:367-387
ATTTGCAGAATGGCTTGTGCAACATACATC367CTGGTTAAGAGGGCGTCACATAATTGAGCTAGGCAGTGGCACTGGAGCTTT
Capsicum annuum Takanotsume DNA, chromosome 10, sequence.
AP026705.1:205847219-205847239
ATTTGCAGAATGGCTTGTGCAACATACATC205847219CTGGTTAAGAGGGCGTCACATAATTGAGCTAGGCAGGTAGTACCTTAAAGC
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 10.
CP124710.1:118401513-118401533
ATTTGCAGAATGGCTTGCGCAACATACGTC118401513CTGGTTAAGAGGGCGTCACATAATTGAGCTAGGCAGGTAATACCTTAAAGC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 10.
CP124722.1:210650525-210650545
ATTTGCAGAATGGCTTGTGCAACATACATC210650525CTGGTTAAGAGGGCGTCACATAATTGAGCTAGGCAGGTAGTACCTTAAAGC
TSA: Capsicum annuum MGMT_Contig4703, mRNA sequence.
JW054947.1:827-847
GCTTTAAGGTACTACCTGCCTAGCTCAATT827ATGTGACGCCCTCTTAACCAGGATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTGGTTAAGAGGGCGTCACAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGGTTAAGAGGGCGTCACAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.466 | 0.457 | search_plus_done; http://172.18.8.135:50400/match?q=CTGGTTAAGAGGGCGTCACAT&k=0&no_gap=0&offset=0&limit=50
0.564 | 0.098 | search_minus_done; http://172.18.8.135:50400/match?q=ATGTGACGCCCTCTTAACCAG&k=0&no_gap=0&offset=0&limit=42
0.565 | 0.001 | cgi_end;

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