GGGenome | Results

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2025-04-09 15:22:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Larus fuscus genome assembly, chromosome: 3.
OZ010755.1:102460945-102460964

CCTGAATGGGCACATTCACTGCACACCAAC102460945CTGGTTGATGTTAGCTGCACATTGGGTGAAAGCATCTTCCATCTCCTCCC

Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome X.
CP130739.1:97602179-97602198

AACCTAAAGTATCCCTAATAATCAGATGAA97602179CTGGTTGATGTTAGCTGCACGAGTGCACAACTACAAGACGTCATACTAGA

Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome Y.
CP130887.1:91818517-91818536

TCTAGTATGACGTCTTGTAGTTGTGCACTC91818517GTGCAGCTAACATCAACCAGTTCATCTGATTATTAGGGATACTTTAGGTT

Agriotes lineatus genome assembly, chromosome: 2.
OW679195.1:21198732-21198751

AATGTCAAACGTTCAAACATAACACTGCAC21198732GTGCAGCTAACATCAACCAGTTAAAATAACTAGCGCCAAATAAATGACCA

Lathronympha strigana genome assembly, chromosome: 5.
OX421906.1:24082409-24082428

TCCTGACGACAGAAGAACGGGAGTGTGCTG24082409GTGCAGCTAACATCAACCAGTGCGCCCGCGGCCGTCAGTGAATGACAATT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.111 | 0.103 | search_plus_done; http://172.18.8.135:50400/match?q=CTGGTTGATGTTAGCTGCAC&k=0&no_gap=0&offset=0&limit=50
0.139 | 0.028 | search_minus_done; http://172.18.8.135:50400/match?q=GTGCAGCTAACATCAACCAG&k=0&no_gap=0&offset=0&limit=48
0.141 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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