GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-18 06:13:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Cannabis sativa PK01617.2_1.CasaPuKu mRNA sequence.
JP449482.1:916-935
TTTGGGTGGCTTGATAGAGCTCCAAACAGT916TCAACTGGAATGACAACCAGTGGACTTGGTGCAAGGAGGAAGAGTTTTGC
TSA: Cannabis sativa PK01617.1_1.CasaPuKu mRNA sequence.
JP461088.1:1093-1112
TTTGGGTGGCTTGATAGAGCTCCAAACAGT1093TCAACTGGAATGACAACCAGTGGACTTGGTGCAAGGAGGAAGAGTTTTGC
Dasypus novemcinctus clone VMRC5-369G9, WORKING DRAFT SEQUENCE, 6 ordered pieces.
AC151813.2:135026-135045
GAGCTCACTGGGGAAACTTTAGAATAGTGT135026TCAACTGGAATGACAACCAGTATCTTCAGCAGCTCTAATTATACCATGAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTGGTTGTCATTCCAGTTGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGGTTGTCATTCCAGTTGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.093 | 0.084 | search_plus_done; http://172.18.8.135:50400/match?q=CTGGTTGTCATTCCAGTTGA&k=0&no_gap=0&offset=0&limit=50
0.126 | 0.032 | search_minus_done; http://172.18.8.135:50400/match?q=TCAACTGGAATGACAACCAG&k=0&no_gap=0&offset=0&limit=50
0.128 | 0.002 | cgi_end;

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