GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 20:44:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus cDNA, clone:MFBL008h12_f, 3' end.
BP041698.1:68-87
AGAGGAGGTGCATAGTCCACAGTTGCTGAA68CTGTAACTGGATCTGCCACGAATCGAAGAGCACAAATGGTGCGTGCGCGC
Lotus japonicus cDNA, clone: LjFL3-001-CB12, 5'-end sequence.
FS318419.1:42-61
AGAGGAGGTGCATAGTCCACAGTTGCTGAA42CTGTAACTGGATCTGCCACGAATCGAAGAGCACAAATGGTGCGTGCGCGC
Lotus japonicus cDNA, clone: LjFL3-062-CF06, 5'-end sequence.
FS338632.1:8-27
GGCTGAA8CTGTAACTGGATCTGCCACGAATCGAAGAGCACAAATGGTGCGTGCGCGC
Spodoptera exigua genome assembly, chromosome: 13.
LR824614.2:13694914-13694933
TTTGTTTAGTTTCACTTATCTTTGACACAT13694914CTGTAACTGGATCTGCCACGAAATAAGTTCCTCTAAACGAATTGAGTTTA
Lotus japonicus genomic DNA, chromosome 6, clone: LjB01J04, BM1377.
AP010318.1:1679-1698
GCGCGCACGCACCATTTGTGCTCTTCGATT1679CGTGGCAGATCCAGTTACAGTTCAGCAACTGTGGACTATGCACCTCCTCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTGTAACTGGATCTGCCACG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGTAACTGGATCTGCCACG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.256 | 0.248 | search_plus_done; http://172.18.8.135:50400/match?q=CTGTAACTGGATCTGCCACG&k=0&no_gap=0&offset=0&limit=50
0.273 | 0.017 | search_minus_done; http://172.18.8.135:50400/match?q=CGTGGCAGATCCAGTTACAG&k=0&no_gap=0&offset=0&limit=46
0.274 | 0.001 | cgi_end;

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