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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:49:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Porphyra yezoensis cDNA clone:PS042f10_r, 5' end.
AV438886.1:45-62
CGCTGGTTGCGCTGGTTGCCGTCTTGGCCG45CTGTCGAGGGTGCGTCTGGGCGCGCCCTTCCCGCCGTCGTCGGCCGGC
OCL0212.C21_I19 Ocl02-Kw1407-W-S-ON-IN-OO-Norm (OCL02) Grosmannia clavigera cDNA clone OCL0212_I19 5', mRNA sequence.
GT584108.1:795-812
CGTCTTTTGAGAAGGCTGATACTGGTATTG795CTGTCGAGGGTGCGTCTGACGCTGCCCGTTCTGCTGCCGACATTGTGT
Pseudomonas fulva strain ZJU1 chromosome, complete genome.
CP082928.1:4018071-4018088
TGCTCAAGCATGTGGGCACCTATCTGAAAG4018071CTGTCGAGGGTGCGTCTGCGACAATCGATGCAAACGAGAACTTTCTCT
Sparus aurata genome assembly, chromosome: 5.
LR537125.1:25767716-25767733
GAAGGCATCCCACGCATTCACCTCCTAAAA25767716CAGACGCACCCTCGACAGATAAGCATCACCAAGGAGACAGACAGCTGA
Allantophomopsis lycopodina strain ATCC 66958 chromosome 1.
CP103009.1:1901215-1901232
AGACGATATCAGCGGCAGAACGAGCAGCAT1901215CAGACGCACCCTCGACAGCAATACCAGTATCGGCCTTCTTGAGAGATG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX590746.1:442415111-442415128
GAGAATGCACCGGGGCCTCTGTGAAGCACC442415111CAGACGCACCCTCGACAGCTGCGCGTTGGCCCCCAAGCGACGCATTGG
Heligmosomoides polygyrus polygyrus genome assembly, chromosome: II.
OX377202.1:106996201-106996218
TTCGGAAGACATTACCGCACCCAACTAGGG106996201CAGACGCACCCTCGACAGCGTCGTCACTTTGAAACGAGTTTCGCTACG
Cryptocephalus primarius genome assembly, chromosome: 18.
OY754955.1:1362859-1362876
TCGAGTATTTCGGATCACCCTGTATCCAAA1362859CAGACGCACCCTCGACAGGAGTAAACCCCGCTTAACGACGGACATGCG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTGTCGAGGGTGCGTCTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGTCGAGGGTGCGTCTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.246 | 0.237 | search_plus_done; http://172.18.8.135:50400/match?q=CTGTCGAGGGTGCGTCTG&k=0&no_gap=0&offset=0&limit=50
0.349 | 0.103 | search_minus_done; http://172.18.8.135:50400/match?q=CAGACGCACCCTCGACAG&k=0&no_gap=0&offset=0&limit=47
0.352 | 0.003 | cgi_end;

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