GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-25 23:16:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Vigna angularis mRNA, clone: VEPS02M05.
HX939482.1:352-371
AGACTGCAGGCACTCATTACTTCATATGTT352CTGTTCCCGGACATTGTTCTGGCGGCATGAAACTTGCCGTCACTGTCAAA
Vigna angularis mRNA, clone: VEPS08D19.
HX941473.1:352-371
AGACTGCAGGCACTCATTACTTCATATGTT352CTGTTCCCGGACATTGTTCTGGCGGCATGAAACTTGCCGTCACTGTCAAA
Vigna angularis mRNA, clone: VES11B09.
HX946267.1:357-376
AGACTGCAGGCACTCATTACTTCATATGTT357CTGTTCCCGGACATTGTTCTGGCGGCATGAAACTTGCCGTCACTGTCAAA
Vigna angularis mRNA, clone: VES16N21.
HX948447.1:346-365
AGACTGCAGGCACTCATTACTTCATATGTT346CTGTTCCCGGACATTGTTCTGGCGGCATGAAACTTGCCGTCACTGTCAAA
Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
AP015035.1:9916265-9916284
AGACTGCAGGCACTCATTACTTCATATGTT9916265CTGTTCCCGGACATTGTTCTGGCGGCATGAAACTTGCCGTCACTGTCAAA
Petrophora chlorosata genome assembly, chromosome: 11.
OX621199.1:17995167-17995186
TTATGGTACTCTACGAGGATTGATGCATCT17995167AGAACAATGTCCGGGAACAGGCTTACTGAGCATTTCAGCCAGCCCTCTTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTGTTCCCGGACATTGTTCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGTTCCCGGACATTGTTCT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.437 | 0.429 | search_plus_done; http://172.18.8.135:50400/match?q=CTGTTCCCGGACATTGTTCT&k=0&no_gap=0&offset=0&limit=50
0.456 | 0.019 | search_minus_done; http://172.18.8.135:50400/match?q=AGAACAATGTCCGGGAACAG&k=0&no_gap=0&offset=0&limit=45
0.456 | 0.001 | cgi_end;

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