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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:50:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Meles meles genome assembly, chromosome: 2.
OV277442.1:120860357-120860376
CAGCTTTTCCAGGTCTCTATTTTTTCATGC120860357CTGTTGAGCTGGAGAGACCCTACTTTTTTTTTTTTTTAACTTAATATATT
Gymnoscopelus braueri genome assembly, chromosome: 3.
OY725510.1:9092150-9092169
TTGTCACCTACCTGAATATGTATTTATATT9092150CTGTTGAGCTGGAGAGACCCCTGTGACCGAACAAACGCTCTGTAGCAATG
Sequence 4590 from patent US 10858665.
MX132942.1:2601-2620
CTGGCGACACAAGGGGAGAGGTTGCAATCC2601CTGTTGAGCTGGAGAGACCCAAGAGCAACTGCCTTGTTTGTGACCTTCTG
Sequence 4590 from patent US 11485982.
OO835327.1:2601-2620
CTGGCGACACAAGGGGAGAGGTTGCAATCC2601CTGTTGAGCTGGAGAGACCCAAGAGCAACTGCCTTGTTTGTGACCTTCTG
Sequence 4590 from patent US 11512323.
OO919029.1:2601-2620
CTGGCGACACAAGGGGAGAGGTTGCAATCC2601CTGTTGAGCTGGAGAGACCCAAGAGCAACTGCCTTGTTTGTGACCTTCTG
JH02007B05 JH-201 Capsicum annuum cDNA 5', mRNA sequence.
CO776154.1:153-172
TTGGCTACTCAAGGGGAGAGGTTGCAGTCT153CTGTTGAGCTGGAGAGACCCTAGAGCAACCGCGCTGTTTGTTATTTTCTG
BJ02005G04 BJ02 Capsicum annuum cDNA 5', mRNA sequence.
CO906680.1:153-172
TTGGCTACTCAAGGGGAGAGGTTGCAGTCT153CTGTTGAGCTGGAGAGACCCTAGAGCAACCGCGCTGTTTGTTATTTTCTG
RTCU1_24_C12.b1_A029 Roots plus added copper Pinus taeda cDNA clone RTCU1_24_C12_A029 3', mRNA sequence.
DR744673.1:176-195
ATAGCTACTCAAGGAGAAAGGTTCCAGGGT176CTGTTGAGCTGGAGAGACCCCCGTGCTACTACTATATATATCATATTTTG
pOP-CEOP00030 CEO (Oil Palm Embryogenic Callus) Elaeis guineensis cDNA clone pOP-CEOP00030 similar to Putative anthranilate phosphoribosyltransferase, mRNA sequence.
ES324078.1:31-50
CTGGCAACACAAGGGGAGAGGTTGCAGTCC31CTGTTGAGCTGGAGAGACCCAAGAGCAACGGCCTTGTTTGTGACCTTCTG
1440979_5_M01_003 PY06 Carica papaya cDNA, mRNA sequence.
EX260361.1:798-817
TGGCTACTCAAGGGGGAAAGATTTCAGTCT798CTGTTGAGCTGGAGAGACCCTAGAGCAACCACATTGTTTGTCACATTTTG
pOP-CEOP00030_EST_C_1_pSK_SK CEO (Oil Palm Embryogenic Callus) Elaeis guineensis cDNA clone pOP-CEOP00030 5', mRNA sequence.
EY399217.1:47-66
CTGGCAACACAAGGGGAGAGGTTGCAGTCC47CTGTTGAGCTGGAGAGACCCAAGAGCAACGGCCTTGTTTGTGACCTTCTG
TSA: Ficus carica mRNA, contig: FICAF02872.
FX379846.1:142-161
CTGGCCACTCAAGGGGAGAGGCTGCAATCT142CTGTTGAGCTGGAGAGACCCAAGAGCAACTGCCCTTTTCGTGCTCTTCTG
TSA: Eustoma exaltatum subsp. russellianum E_gra_c54334 mRNA sequence.
JT610788.1:138-157
ATCGCGTCTCAGGGAGAGCGATTCCAGGCG138CTGTTGAGCTGGAGAGACCCTCGAGCAACCGCGATAWTTATTACATTCTG
TSA: Capsicum annuum MGMT_Contig1799, mRNA sequence.
JW052043.1:2462-2481
TTGGCTACTCAAGGGGAGAGGTTGCAGTCT2462CTGTTGAGCTGGAGAGACCCTAGAGCAACCGCGCTGTTTGTTATTTTCTG
Eustoma grandiflorum DNA, chromosome 13, draft genome sequence.
AP025052.1:2407063-2407082
ATCGCGTCTCAGGGAGAGCGATTCCAGGCG2407063CTGTTGAGCTGGAGAGACCCTCGAGCAACTGCGATATTTATTACATTCTG
Antiaris toxicaria isolate JCLG002 chromosome 4.
CP141156.1:9852139-9852158
CTGGCCACTCAAGGGGAGAGGCTGCAATCT9852139CTGTTGAGCTGGAGAGACCCAAGAGCAACTGCTCTTTTTGTGCTCTTCTG
Antiaris toxicaria isolate JCLG002 chromosome 4.
CP141169.1:9895618-9895637
CTGGCCACTCAAGGGGAGAGGCTGCAATCT9895618CTGTTGAGCTGGAGAGACCCAAGAGCAACTGCTCTTTTTGTGCTCTTCTG
Ilex aquifolium genome assembly, chromosome: 9.
OX637399.1:31712744-31712763
TTGGCGACTCAAGGGGAGAGGCTGCAGTCT31712744CTGTTGAGCTGGAGAGACCCGAGGGCTACAGCTCTGTTTGTGATTTTCTG
Lutra lutra genome assembly, chromosome: 2.
LR738404.1:90094628-90094647
AAAAATATATTAAGTTAAAATAAAAAAGTA90094628GGGTCTCTCCAGCTCAACAGGCATGATAAAATAGAGACCTGGAAAAGCTA
Martes martes genome assembly, chromosome: 2.
OY734064.1:89854359-89854378
TAAGTTAAAAAAAAAAAAAAAAAAAAAGTA89854359GGGTCTCTCCAGCTCAACAGGCATGATAAAATAGAGACCTGGAAAAGCTG
Carassius carassius genome assembly, chromosome: 8.
OY720475.1:190094-190113
TTTGAGATCTGTTATTTTCCTCCATCCCGA190094GGGTCTCTCCAGCTCAACAGGATGCCGTGGACAAGTGGTCATCAATCATT
RTFE1_8_H06.b1_A029 Roots minus iron Pinus taeda cDNA clone RTFE1_8_H06_A029 3', mRNA sequence.
DR160844.1:313-332
CAAAATATGATATATATAGTAGTAGCACGG313GGGTCTCTCCAGCTCAACAGACCCTGGAACCTTTCTCCTTGAGTAGCTAT
KS14028D01 KS14 Capsicum annuum cDNA, mRNA sequence.
GD060017.1:423-442
CAGAAAATAACAAACAGCGCGGTTGCTCTA423GGGTCTCTCCAGCTCAACAGAGACTGCAACCTCTCCCCTTGAGTAGCCAA
KS14042B10 KS14 Capsicum annuum cDNA, mRNA sequence.
GD061289.1:423-442
CAGAAAATAACAAACAGCGCGGTTGCTCTA423GGGTCTCTCCAGCTCAACAGAGACTGCAACCTCTCCCCTTGAGTAGCCAA
KS14045D11 KS14 Capsicum annuum cDNA, mRNA sequence.
GD061590.1:423-442
CAGAAAATAACAAACAGCGCGGTTGCTCTA423GGGTCTCTCCAGCTCAACAGAGACTGCAACCTCTCCCCTTGAGTAGCCAA
KS14048H10 KS14 Capsicum annuum cDNA, mRNA sequence.
GD061914.1:423-442
CAGAAAATAACAAACAGCGCGGTTGCTCTA423GGGTCTCTCCAGCTCAACAGAGACTGCAACCTCTCCCCTTGAGTAGCCAA
CLS_CLiFpEfSpn_22a8_1_f18cLibkit3LD_C09 CLS_CLiFpEfSPn_plant Festuca pratensis cDNA clone 22f18 3', mRNA sequence.
GO853410.1:465-484
CAGAAGGGCACGAACAGTGCTGTGGCTCTC465GGGTCTCTCCAGCTCAACAGAGACTGCAGCCTTTCTCCTTGTGTTGCAAG
Elaeis guineensis EST, clone (6lib)_isotig07692.
LM613477.1:457-476
CAGAAGGTCACAAACAAGGCAGTTGCTCTT457GGGTCTCTCCAGCTCAACAGGGATTGCAACCTCTCCCCTTGTGTCGCCAG
TSA: Elaeis guineensis isotig09626.Elguifruit mRNA sequence.
JO096853.1:401-420
CAGAAGGTCACAAACAAGGCAGTTGCTCTT401GGGTCTCTCCAGCTCAACAGGGATTGCAACCTCTCCCCTTGTGTCGCCAG
TSA: Capsicum annuum MACs80_7768, mRNA sequence.
JW171408.1:496-515
CAGAAAATAACAAACAGCGCGGTTGCTCTA496GGGTCTCTCCAGCTCAACAGAGACTGCAACCTCTCCCCTTGAGTAGCCAA
Capsicum annuum Takanotsume DNA, chromosome 10, sequence.
AP026705.1:237012303-237012322
CAGAAAATAACAAACAGCGCGGTTGCTCTA237012303GGGTCTCTCCAGCTCAACAGAGACTGCAACCTCTCCCCTTGAGTAGCCAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 10.
CP124722.1:241530062-241530081
CAGAAAATAACAAACAGCGCGGTTGCTCTA241530062GGGTCTCTCCAGCTCAACAGAGACTGCAACCTCTCCCCTTGAGTAGCCAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTGTTGAGCTGGAGAGACCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGTTGAGCTGGAGAGACCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.812 | 0.804 | search_plus_done; http://172.18.8.135:50400/match?q=CTGTTGAGCTGGAGAGACCC&k=0&no_gap=0&offset=0&limit=50
1.577 | 0.764 | search_minus_done; http://172.18.8.135:50400/match?q=GGGTCTCTCCAGCTCAACAG&k=0&no_gap=0&offset=0&limit=32
1.586 | 0.009 | cgi_end;

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