GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:43:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

JP 2017537871-A/6: COMPOSITIONS COMPRISING BACTERIAL STRAINS.
MA014432.1:2456484-2456503
ATTTATATTACACATTTCATTTTTATAGTA2456484CTGTTTCGTCATCTTTTTCCCAAAATAGAAATACTACAACATGGAATAAT
JP 2018203742-A/6: COMPOSITIONS COMPRISING BACTERIAL STRAINS.
MC415420.1:2456484-2456503
ATTTATATTACACATTTCATTTTTATAGTA2456484CTGTTTCGTCATCTTTTTCCCAAAATAGAAATACTACAACATGGAATAAT
Sequence 6 from patent US 10058574.
MI964980.1:2456484-2456503
ATTTATATTACACATTTCATTTTTATAGTA2456484CTGTTTCGTCATCTTTTTCCCAAAATAGAAATACTACAACATGGAATAAT
Sequence 6 from patent US 10391130.
MO332187.1:2456484-2456503
ATTTATATTACACATTTCATTTTTATAGTA2456484CTGTTTCGTCATCTTTTTCCCAAAATAGAAATACTACAACATGGAATAAT
Sequence 6 from patent US 10780134.
MV715671.1:2456484-2456503
ATTTATATTACACATTTCATTTTTATAGTA2456484CTGTTTCGTCATCTTTTTCCCAAAATAGAAATACTACAACATGGAATAAT
Sequence 6 from patent US 11040075.
MY058766.1:2456484-2456503
ATTTATATTACACATTTCATTTTTATAGTA2456484CTGTTTCGTCATCTTTTTCCCAAAATAGAAATACTACAACATGGAATAAT
Blautia argi isolate Blautia argi canine HQ MAG genome assembly, chromosome: 1.
LR994468.1:2246449-2246468
CTGATACCACATTTCCAGTTAGTATCAGCT2246449CTGTTTCGTCATCTTTTTCCCGAATCAGGGAAATAACTTCCTCTTCAGTG
TSA: Sesamum indicum cultivar Zhongzhi 11 Unigene62309 mRNA sequence.
JL349003.1:1265-1284
CAGCGGCGTATCTTCCCGTTTCCCGGTCAG1265CTGTTTCGTCATCTTTTTCCGGGCGGCGGTGGGCGGTTGCCCTGCTGGTG
TSA: Sesamum indicum Locus_26044_Transcript_1/2_Confidence_1.000_Length_2624 mRNA sequence.
JP656157.1:1774-1793
CAGCGGCGTATCTTCCCGTTTCCCGGTCAG1774CTGTTTCGTCATCTTTTTCCGGGCGGCGGTGGGCGGTTGCCCTGCTGGTG
MG_Bb0077N14.F MG_Bb Erythranthe guttata genomic 5', genomic survey sequence.
GS448392.1:518-537
CATTGTCCGATTTCGGAGACATGGATACAC518CTGTTTCGTCATCTTTTTCCCCATCGGAATGGTAAATTGCAAGGGTCAAA
MG_Bb0027D15.F MG_Bb Erythranthe guttata genomic 5', genomic survey sequence.
GS462006.1:555-574
CACTGTCCGATTTTGGAGACATGGATACAC555CTGTTTCGTCATCTTTTTCCCCATCGGAATGGTAATTTGTAAGGGTCAAA
Gossypium raimondii isolate D5-4 chromosome D5_08.
CP032560.1:219691-219710
TAGGTTCGTATCATCACGTTTCCCAGTTAA219691CTGTTTCGTCATCTTTTTCCTACGAGCAGGAACAGATGGCTGCTCGGTTG
Corylus americana cultivar Rush chromosome 10.
CP125823.1:18031821-18031840
CAAGATCGTATCTTCGCGTTTGCCAGTTAA18031821CTGTTTCGTCATCTTTTTCCTCGGCGCGCTTGGCTGCCCTGCCTGTGGCT
Corylus americana cultivar Winkler chromosome 10.
CP125834.1:17979770-17979789
CAAGATCGTATCTTCGCGTTTGCCAGTTAA17979770CTGTTTCGTCATCTTTTTCCTCGGCGCGCTTGGCTGCCCTGCCTGTGGCT
Swietenia macrophylla isolate HCNGB_00002344 chromosome 25.
CP135576.1:1824040-1824059
CAACGGCGTGTCATCCCGTTTTGCTGTGAA1824040CTGTTTCGTCATCTTTTTCCAGCTTTGCTGCCCCGAAGGAGTTTCCATCA
Prunus mume strain taoxingmei clone P24 SSR marker genomic sequence.
GU458025.1:1-20
1CTGTTTCGTCATCTTTTTCCGCGGCAAGCTTGGCTGCGTTGCCTGCGGCT
Corylus avellana genome assembly, chromosome: ca10.
LR899432.1:17244690-17244709
CAAGATCGTATCTTCGCGTTTGCCAGTTAA17244690CTGTTTCGTCATCTTTTTCCTCGGCGCGCTTGGCTGCCCTGCCTGTGGCT
Euphrasia confusa genome assembly, chromosome: 16.
OX940964.1:729170-729189
CAAAGCCGTGTCGTCCCTTTTTCCGGTCAG729170CTGTTTCGTCATCTTTTTCCGAGGCGTGATGGGAGTGTGTCCGGACAAGG
Ajuga chamaepitys genome assembly, chromosome: 13.
OY282507.1:13563290-13563309
CAGCGCCGAGTCCTCCCGTTTTCCAGTCAG13563290CTGTTTCGTCATCTTTTTCCGGGGAGTCGAAGGAGTCTGGCTGGACGATG
Alnus glutinosa genome assembly, chromosome: 9.
OY340906.1:21664220-21664239
CAAGATCGTATCCTCGCGTTTTCCGGTTAA21664220CTGTTTCGTCATCTTTTTCCGCGGCACGCTTGGCTGCCCTGCCTGTGGCT
Myrica gale genome assembly, chromosome: 5.
OZ005602.1:20073050-20073069
CAAGAGCGTATCCTCGCGTTTTCCAGTTAA20073050CTGTTTCGTCATCTTTTTCCGAGGGGCGCTTGGTTCCCCTGCTTGGGGCT
Lucinisca nassula genome assembly, chromosome: 12.
OY757021.1:122704336-122704355
GTAAACTTAACACAATTCCTTATATTTTTT122704336CTGTTTCGTCATCTTTTTCCAAAAATACGTATCTAATCACTGCTCTGTAC
Sepia lycidas genome assembly, chromosome: 13.
OZ010583.1:60407383-60407402
TTACTTCTTCTTGCTCTGACGCTTATTCAT60407383CTGTTTCGTCATCTTTTTCCTCATTTTGACGCTTCTTCTTCTTCGTCATC
Pm_2736 Fruits and flowers of Prunus mume cv. Xiyeqing Prunus mume cDNA, mRNA sequence.
GW871310.1:185-204
GCCGCCAGGCAACGCAGCCAAGCTTGCCGC185GGAAAAAGATGACGAAACAGTTAACGGGAAAGCGCGATGATACGCCTTTG
TSA: Sesamum indicum cultivar Zhongzhi 11 Unigene24976 mRNA sequence.
JL346679.1:395-414
CACCAGCAGGGCAACCGCCCACCGCCGCCC395GGAAAAAGATGACGAAACAGCTGACCGGGAAACGGGAAGATACGCCGCTG
TSA: Betula platyphylla Unigene7863_ya_RNA mRNA sequence.
JP675935.1:226-245
AGCCAGAGGCAGGGCAGCCAAGCGTGCCGC226GGAAAAAGATGACGAAACAGTTAACCGGAAAACGCGACGATACGCT
LuSp094B15_1061063885183_TV POTATO-B-01-100-110KB Solanum phureja genomic clone LuSp094B15, genomic survey sequence.
GS324634.1:151-170
GATTATACAGCTAAAAAGGGACAAATTAAA151GGAAAAAGATGACGAAACAGAAAAAGTTTCCGGCGAGAGTGAAGAGGAAG
Prunus dulcis DNA, pseudomolecule Pd06.
AP019302.1:5833980-5833999
AGCCGCAGGCAGCGCAGCCAAGCTTGCCGC5833980GGAAAAAGATGACGAAACAGTTAACGGGAAAGCGCGATGATACGCCTTTG
Solanum tuberosum cultivar P8 chromosome 1.
CP046688.1:83708392-83708411
GATTATACAGCTAAAAAGGNACAAATTAAA83708392GGAAAAAGATGACGAAACAGAAAAAGTTTCCGGCGAGAGTGAAGAGGAAG
Solanum tuberosum cultivar MSH/14-112 chromosome 1.
CP046702.1:83709157-83709176
GATTATACAGCTAAAAAGGSACAAATTAAA83709157GGAAAAAGATGACGAAACAGAAAAAGTTTCCGGCGAGAGTGAAGAGGAAG
Solanum pinnatisectum cultivar CGN17745 chromosome 1.
CP047567.1:83680496-83680515
GATTATACAGCTAAAAAGGCACAAATTAAA83680496GGAAAAAGATGACGAAACAGAAAAAGTTTCCGGCGAGAGTGAAGAGGAAG
Carpinus viminea chromosome 2.
CP054668.1:5760260-5760279
AGCCCCAGGCAGGGCAGCCAAGCGCGCCGA5760260GGAAAAAGATGACGAAACAGTTAACTGGCAAACGCGAGGATACGATCTTG
Carpinus viminea chromosome 4.
CP054670.1:1381856-1381875
AGCCCCTGGCAGGGCAGCCAAGCGCGCCGA1381856GGAAAAAGATGACGAAACAGTTAATTGGCAAACGCGAGGATACGATTTCG
Solanum tuberosum cultivar Solyntus chromosome 1.
CP055234.1:54740045-54740064
GATTATACAGCTAAAAAGGGACAAATTAAA54740045GGAAAAAGATGACGAAACAGAAAAAGTTTCCGGCGAGAGTGAAGAGGAAG
Solanum verrucosum cultivar 11H23 chromosome 1.
CP133612.1:79762317-79762336
GATTATACAGCTAAAAAGGGGCAAATTAAA79762317GGAAAAAGATGACGAAACAGAAAAAGTTTCCGGCGAGAGTGAAGAGGAAG
Ziziphus jujuba cultivar Dongzao chromosome 10.
CP134460.1:10589008-10589027
CAGCTCAGCCGCAGACGCCAACCGCTCCTC10589008GGAAAAAGATGACGAAACAGCTGACCGGAAAACGTGATGATACTCCTCTG
Khaya senegalensis isolate HCNGB_00002341 chromosome 18.
CP135540.1:5679126-5679145
TGATGGAAACTCCTTCGGGGCAGCAAAGCT5679126GGAAAAAGATGACGAAACAGTTCACAGCAAAACGGGATGATACACCGCTG
Prunus mume strain xianmimei clone P23 SSR marker genomic sequence.
GU458024.1:170-189
AGCCGCAGGCAACGCAGCCAAGCTTGCCGC170GGAAAAAGATGACGAAACAG
Fagus sylvatica genome assembly, chromosome: 9.
OU015769.1:3657388-3657407
AACCACAAGCAGGGCAGCCAAGCCTGCCCC3657388GGAAAAAGATGACGAAACAGTTAACCGGAAAACGCGATGATACGCCTTTG
Euphrasia confusa genome assembly, chromosome: 2.
OX940950.1:17957321-17957340
CCTCGTCCGGGCACACTTCCATCACGCCCA17957321GGAAAAAGATGACGAAACAGCAGACCGGAAAAAGGGACGACACGGCCTTG
Geranium rotundifolium genome assembly, chromosome: 7.
OY987317.1:27082401-27082420
AACCTGAGCGGCCACAGCAGCCTACGCCCC27082401GGAAAAAGATGACGAAACAGCTTACTGGGAAAAGGGATGATACTCGACTC
Myrica gale genome assembly, chromosome: 21.
OZ005618.1:9299934-9299953
AGCCCCAAGAAGGGGAACCAAGCGCTCCTC9299934GGAAAAAGATGACGAAACAGTTAACTGGAAAACGCGAGGATACGCTCTTG
Blautia argi strain KCTC 15426 chromosome, complete genome.
CP030280.1:738036-738055
CACTGAAGAGGAAGTTATTTCCCTGATTCG738036GGAAAAAGATGACGAAACAGAGCTGATACTAACTGGAAATGTGGTATCAG
Dasysyrphus albostriatus genome assembly, chromosome: 3.
OX276337.1:27617043-27617062
GGACAAGGTTGTCCAAAAAAATGTGTCCCA27617043GGAAAAAGATGACGAAACAGTTGAGCCTAAATATGAAAGGAACGAACGTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTGTTTCGTCATCTTTTTCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGTTTCGTCATCTTTTTCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.565 | 0.556 | search_plus_done; http://172.18.8.135:50400/match?q=CTGTTTCGTCATCTTTTTCC&k=0&no_gap=0&offset=0&limit=50
0.847 | 0.282 | search_minus_done; http://172.18.8.135:50400/match?q=GGAAAAAGATGACGAAACAG&k=0&no_gap=0&offset=0&limit=27
0.861 | 0.014 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).