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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-08 06:37:01, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Lotus japonicus genomic DNA, chromosome 3, clone: LjT45C16, TM0203.
AP006119.1:89452-89471
TGTGGCGGTTTTTGGTGAGTTTCAGAGACT89452CTGTTTTGACGAATCGATAGAAAGAAAGAAGAGTAAAGAAAAAAATCTGT
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:87768602-87768621
TGTGGCGGTTTTTGGTGAGTTTCAGAGACT87768602CTGTTTTGACGAATCGATAGAAAGAAAGAAGAGTAAAGAAAAAAATCTGT
Stomoxys calcitrans genome assembly, chromosome: 3.
OY720437.1:69762206-69762225
GGATTCTTAGAGAGCACGATGAGGAATCCT69762206CTATCGATTCGTCAAAACAGAACCTTGTGAGGCCCTCTTAGCCGACTTAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTGTTTTGACGAATCGATAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGTTTTGACGAATCGATAG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.163 | 0.154 | search_plus_done; http://172.18.8.135:50400/match?q=CTGTTTTGACGAATCGATAG&k=0&no_gap=0&offset=0&limit=50
0.252 | 0.089 | search_minus_done; http://172.18.8.135:50400/match?q=CTATCGATTCGTCAAAACAG&k=0&no_gap=0&offset=0&limit=48
0.253 | 0.001 | cgi_end;

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