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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 19:37:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sciurus carolinensis genome assembly, chromosome: 2.
LR738591.1:141358102-141358119
AACTTCAAAAAGAACACAGGGCTGGGGTTT141358102CTTAGTGGTGAAGTATTCACATGGCATTTGCAAGGTCCTGAATTCTAT
Sciurus carolinensis genome assembly, chromosome: 5.
LR738594.1:165169648-165169665
AAAAGGGGCAAGAAAAGGGTTGGGGATGTG165169648CTTAGTGGTGAAGTATTCTGGGTTCAATTTCCAGCACTAAAATAAACC
Stenella coeruleoalba genome assembly, chromosome: 17.
OX596402.1:1418529-1418546
ACCCACCAGAAACCTAAAACAAACACCATA1418529CTTAGTGGTGAAGTATTCCAAATGCTCCCACGTAACCCAAGAACGTAA
Danio kyathit genome assembly, chromosome: 16.
LR812534.1:27433206-27433223
AGAAAAATGAATGAGCTGATGGATTTATTT27433206CTTAGTGGTGAAGTATTCACATAAATGTTCTTGTGGATATTCATTAAC
Nesoenas mayeri genome assembly, chromosome: 6.
OY720062.1:31295445-31295462
AGATTCTTTCTAGCCGTTAGAGTGCAGAAG31295445CTTAGTGGTGAAGTATTCATATTGTAATACTTTGGAGAACTGAGCTTC
MAG: Candidatus Bathyarchaeota archaeon isolate bin796 chromosome.
CP070659.1:938274-938291
CAATTCGGAAGTCACCCAGATAGCGATAAG938274CTTAGTGGTGAAGTATTCCGGAATAAATTCGACCGTGGGTATGATGGC
est_t_truncatus1024 HML_TuTr_IL-2 Tursiops truncatus cDNA, mRNA sequence.
DT661316.1:33-50
ACCCACCAGAAACCTAAAACAAACACCATA33CTTAGTGGTGAAGTATTCCAAATGCTCCCACGTAACCCAAGAACGTAA
Aegilops sharonensis genome assembly, chromosome: 1S.
LR880966.1:775119495-775119512
GTTTGGAGGGTTTTCCCACGCCTGGCTTGC775119495CTTAGTGGTGAAGTATTCTCGTTCCTTGGATTAGGACGACGGTCCAGT
Viscum album genome assembly, chromosome: 1_6.
OY728124.1:103272347-103272364
ATATTCTATATATGATGTAATAGATCAGTT103272347CTTAGTGGTGAAGTATTCAGTGATCATCGGTACGTGTGTGAGGAGTAG
Viscum album genome assembly, chromosome: 10_4.
OY728166.1:1449603838-1449603855
TTGGTCTATATACAATGGAATACATTAGGG1449603838CTTAGTGGTGAAGTATTCAAGGATCACCAATACATGTGGGAGGGGTAG
Mimas tiliae genome assembly, chromosome: 7.
HG995245.1:456418-456435
GTTTTATTTTGCTTTAATTTTAGACCTTAG456418CTTAGTGGTGAAGTATTCGCCAATTTTCTCTGTTGTCTAACTAAAAAT
Apoderus coryli genome assembly, chromosome: 15.
OU452213.1:4946371-4946388
TGGATTGGACTCGCATTTCTACAAGCATGA4946371CTTAGTGGTGAAGTATTCTGCGACTTTCTGAAACACAAGCTTCCTGGA
Dysidea avara genome assembly, chromosome: 12.
OY787657.2:9374736-9374753
GTTTTTAACAGCTAAAACAGGCCAGATATA9374736CTTAGTGGTGAAGTATTCAAAAGATTTCTGGCCTTGTAGCCATTAACA
Homo sapiens chromosome 3 clone RP11-24H1, complete sequence.
AC096915.2:86478-86495
ATTACCTAGTGTTTCTTTTGATTTTAAGAG86478GAATACTTCACCACTAAGTTTGGACTTTCTCTAGGCTTTTGGTAGGTA
Homo sapiens DNA, chromosome 3, nearly complete genome.
AP023463.1:62999553-62999570
ATTACCTAGTGTTTCTTTTGATTTTAAGAG62999553GAATACTTCACCACTAAGTTTGGACTTTCTCTAGGCTTTTGGTAGGTA
Homo sapiens isolate CHM13 chromosome 3.
CP068275.2:62984164-62984181
ATTACCTAGTGTTTCTTTTGATTTTAAGAG62984164GAATACTTCACCACTAAGTTTGGACTTTCTCTAGGCTTTTGGTAGGTA
Homo sapiens isolate NA24385 chromosome 3.
CP139518.1:62914357-62914374
ATTACCTAGTGTTTCTTTTGATTTTAAGAG62914357GAATACTTCACCACTAAGTTTGGACTTTCTCTAGGCTTTTGGTAGGTA
Homo sapiens isolate NA24385 chromosome 3.
CP139541.1:62991830-62991847
ATTACCTAGTGTTTCTTTTGATTTTAAGAG62991830GAATACTTCACCACTAAGTTTGGACTTTCTCTAGGCTTTTGGTAGGTA
Sciurus vulgaris genome assembly, chromosome: 2.
LR738612.1:61902062-61902079
CAAGAATTCAGGACCTTGCAAATGCCATGT61902062GAATACTTCACCACTAAGAAACCCCAGCCCTGTGTTCTTTTTGAAGTT
Orcinus orca genome assembly, chromosome: 17.
OW443377.1:86096930-86096947
TTACGTTCTTGGGTTACGTGGGAGCATTTG86096930GAATACTTCACCACTAAGTATGGTGTTTGTTTTAGGTTTCTGGTGGGT
Lagenorhynchus albirostris genome assembly, chromosome: 17.
OX459089.1:80810596-80810613
TTACGTTCTTGGGTTACGTGGGAGCATTTG80810596GAATACTTCACCACTAAGTATGGTGTTTGTTTTAGGTTTCTGGTGGGT
Delphinus delphis genome assembly, chromosome: 17.
OX465343.1:79131974-79131991
TTACGTTCTTGGGTTACGTGGGAGCATTTG79131974GAATACTTCACCACTAAGTATGGTGTTTGTTTTAGGTTTCTGGTGGGT
Globicephala melas genome assembly, chromosome: 17.
OY734056.1:78577726-78577743
TTACGTTCTTGGGTTACGTGGGAGCATTTG78577726GAATACTTCACCACTAAGTATGGTGTTTGTTTTAGGCTTCTGGTGGGT
Sphaeramia orbicularis genome assembly, chromosome: 8.
LR597465.1:36438711-36438728
GTATTGTACTTTTAGTTTTGTGAAAGATCT36438711GAATACTTCACCACTAAGTATAGCTTAATTTAACCTTCGCATAAATCA
Sphaeramia orbicularis genome assembly, chromosome: 18.
LR597475.1:6198330-6198347
ACTAACCATTGTACTATCCACACAAGTAGG6198330GAATACTTCACCACTAAGACTTTTATCAGATTTTTTTTAATGTTAAAA
Hyperoplus immaculatus genome assembly, chromosome: 19.
OX442367.1:59770-59787
TGAGGTCCAAGAACACACAGGATGTTAAAG59770GAATACTTCACCACTAAGTCGCGTTCTATCATTATAAAATCACTATTA
Eukaryotic synthetic construct chromosome 3.
CP034502.1:62866177-62866194
ATTACCTAGTGTTTCTTTTGATTTTAAGAG62866177GAATACTTCACCACTAAGTTTGGACTTTCTCTAGGCTTTTGGTAGGTA
Eukaryotic synthetic construct chromosome 3.
CP034527.1:62866177-62866194
ATTACCTAGTGTTTCTTTTGATTTTAAGAG62866177GAATACTTCACCACTAAGTTTGGACTTTCTCTAGGCTTTTGGTAGGTA
602392479F1 NIH_MGC_94 Mus musculus cDNA clone IMAGE:4504506 5', mRNA sequence.
BG295207.1:706-723
CTCTAGTCCCCTTGGTAGCAGTGAAGCTTA706GAATACTTCACCACTAAGGGAGATCCCTAATTCCCGGGGTTACTGGGT
SBA031_N19.f Sugar beet BAC library USH20 (Code SBA) Beta vulgaris genomic clone SBA031_N19 5', genomic survey sequence.
ED032280.1:827-844
TGTTCCCCCCCAACAATCTCCGGACCCTCC827GAATACTTCACCACTAAGATTTGTTCATATTCTCAACATCATAGCCTC
Populus nigra genome assembly, chromosome: 9.
OX637680.1:16422509-16422526
GTACCAAAATAATTAATTGAAATGAATCTA16422509GAATACTTCACCACTAAGGATTCAAGAAACTGACTGGAGACATTTCAT
Viscum album genome assembly, chromosome: 10_4.
OY728166.1:1032993349-1032993366
CTACTTCTCCCACACATATTGGTGATCATT1032993349GAATACTTCACCACTAAGTCCTGGTCTATTCCATCATATATAAACCAT
Viscum album genome assembly, chromosome: B1.
OY728167.1:527788238-527788255
ATACCCCTGCCACACGTACTGACGATCGTC527788238GAATACTTCACCACTAAGCCTTGATCTATTCCATCGTATATAGACCAG
Sphenostylis stenocarpa genome assembly, chromosome: 3.
OY731400.1:87968647-87968664
GTTGAATTTCATCACTTTTTTGAAAGGCTT87968647GAATACTTCACCACTAAGTATAGTATACATGCATTCAAGAGTATCAAT
Aurantimicrobium sp. INA4 DNA, complete genome.
AP027040.1:691757-691774
GATCGAGAAATGGTCTTCTTAGCAAAAAGC691757GAATACTTCACCACTAAGGGCATTAAGGGATGGGCTACGAAGTGGTTC
Boloria selene genome assembly, chromosome: 9.
HG993141.1:13830724-13830741
TTTGAATTCGCTTCATTTATGTCTCCAAGC13830724GAATACTTCACCACTAAGTATTCCAAAGATATAGAGCATATGACTAGT
Synanthedon formicaeformis genome assembly, chromosome: Z.
OX243953.1:2543535-2543552
AGATACCTACTCTTTAAGTAGATGCAACGA2543535GAATACTTCACCACTAAGAAAATGCGAATTAACCTTATTCTTCGAATA
Tinea pellionella genome assembly, chromosome: 23.
OX411267.1:3672329-3672346
AATCGAACCCATGTCCTCCGTTTTGCGCAC3672329GAATACTTCACCACTAAGTTACAGCTGTGTACACCACTAAGCTATCAC
Callimorpha dominula genome assembly, chromosome: 12.
OX457002.1:1705202-1705219
AAAACTTTGTTCTGGTTTGGCTAATGTTGC1705202GAATACTTCACCACTAAGTGCCTACAACTTGCTAACTACTGAACTAAT
Brachypterus glaber genome assembly, chromosome: 7.
OY294050.1:38415304-38415321
GTAAAATACGCAGTATACCGCTCGACGTCT38415304GAATACTTCACCACTAAGTTTGCAAGTCTTATACCTCCCTTTAAATTA
Sepioteuthis lessoniana genome assembly, chromosome: 4.
OY757907.1:29138961-29138978
GCATGAACTCTGGTCTCCTGTTCCATTGGC29138961GAATACTTCACCACTAAGCCAATGGGCCGATCAACGCGGTAAATACAC
Pyrausta purpuralis genome assembly, chromosome: Z.
OZ001647.1:1522840-1522857
ATAGACCACCCCAACGTCGTCAGGCTACAC1522840GAATACTTCACCACTAAGGCGTTCGGAGATCATTGTGAGTAAGCGTCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTAGTGGTGAAGTATTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTAGTGGTGAAGTATTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.439 | 0.430 | search_plus_done; http://172.18.8.135:50400/match?q=CTTAGTGGTGAAGTATTC&k=0&no_gap=0&offset=0&limit=50
0.615 | 0.176 | search_minus_done; http://172.18.8.135:50400/match?q=GAATACTTCACCACTAAG&k=0&no_gap=0&offset=0&limit=37
0.634 | 0.019 | cgi_end;

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