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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-12 07:39:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Bos taurus genome assembly, chromosome: 2.
LR962875.1:75000069-75000088
ACTCTTGCCTGACAAATTCATCTTTCAACA75000069CTTCAAACATATCATTCTGCTTTCTACTATCCTGTAGGGTTTCAGCTAAG
Ovis canadensis canadensis isolate 43U chromosome 2 sequence.
CP011887.1:176023989-176024008
CTTAGCTGAAACCCTACAGGATAGTAGAAA176023989GCAGAATGATATGTTTGAAGTGTTTAAAGATGAATTTGTCAGGCAAGAAT
Capricornis sumatraensis isolate serow.1 chromosome 3.
CP135628.1:107788548-107788567
CTTAGCTGAAACCCTACAGGATAGTAGAAA107788548GCAGAATGATATGTTTGAAGTGTTTAAAGATGAATTTGTCAGGCAAGAAT
Bos taurus genome assembly, chromosome: 2.
LR962750.1:63744499-63744518
CTTAGCTGAAACCCTACAGGATAGTAGAAA63744499GCAGAATGATATGTTTGAAGTGTTGAAAGATGAATTTGTCAGGCAAGAGT
Bos gaurus x Bos taurus genome assembly, chromosome: 2.
OX258956.1:65832996-65833015
CTTAGCTGAAACCCTACAGGATAGTAGAAA65832996GCAGAATGATATGTTTGAAGTGTTGAAAGATGAATTTGTCAGGCAAGAGT
Bos taurus strain mammals genome assembly, chromosome: 2.
OX344691.1:65677015-65677034
CTTAGCTGAAACCCTACAGGATAGTAGAAA65677015GCAGAATGATATGTTTGAAGTGTTGAAAGATGAATTTGTCAGGCAAGAGT
Bos taurus genome assembly, chromosome: Bta02.
OY997230.1:66302490-66302509
CTTAGCTGAAACCCTACAGGATAGTAGAAA66302490GCAGAATGATATGTTTGAAGTGTTGAAAGATGAATTTGTCAGGCAAGAGT
WS02710.C21_J17 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02710_J17 5, mRNA sequence.
DR522025.1:687-706
GTCTTTCAGCCGAGCCAAGGGTTCTGTTTG687GCAGAATGATATGTTTGAAGATAGCATGGAAGCCTTAGGCATGCAGATTG
TSA: Larix kaempferi PEMC13010.Lakaproemb mRNA sequence.
JR142728.1:92-111
GTCTTTCAGCCGAGCGAAGGGTTCTCTTTG92GCAGAATGATATGTTTGAAGATAGCATGGAAGCCTTTGGCATGCAGCTTG
TSA: Abies alba contig05139.Aaseedling mRNA sequence.
JV149756.1:193-212
GTCCTTCAGCCGAACGAAGGGTTCTCTTTG193GCAGAATGATATGTTTGAAGATAGCATGGAAGCATTTGGCATGCAGCTTG
Bos taurus clone CH240-135F3, WORKING DRAFT SEQUENCE, 18 unordered pieces.
AC164047.2:24436-24455
CTTAGCTGAAACCCTACAGGATAGTAGAAA24436GCAGAATGATATGTTTGAAGTGTTGAAAGATGAATTTGTCAGGCAAGAGT
Bos taurus clone CH240-235D17, WORKING DRAFT SEQUENCE, 4 unordered pieces.
AC170027.3:85318-85337
CTTAGCTGAAACCCTACAGGATAGTAGAAA85318GCAGAATGATATGTTTGAAGTGTTGAAAGATGAATTTGTCAGGCAAGAGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTCAAACATATCATTCTGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTCAAACATATCATTCTGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.180 | 0.170 | search_plus_done; http://172.18.8.135:50400/match?q=CTTCAAACATATCATTCTGC&k=0&no_gap=0&offset=0&limit=50
0.368 | 0.188 | search_minus_done; http://172.18.8.135:50400/match?q=GCAGAATGATATGTTTGAAG&k=0&no_gap=0&offset=0&limit=49
0.375 | 0.008 | cgi_end;

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