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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2026-03-03 06:55:36, GGGenome : DDBJ release 138.0 (Jun, 2025)

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Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

uncultured Desulfobacter sp. isolate 00b13672-1c6a-4f01-9bd3-5d9cfdb0d95e genome assembly, chromosome: 1.
OY762069.1:4843118-4843135
ATCCGATGCCGAACAGGGCCATGGCTGTCT4843118CTTCAAGCGGTGCATTCCCTGCCCGTTCGCCAAGGCCGTTCACGGTGA
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_29173.
FX731642.1:651-668
CTCCTCGACATTTCAAAGCCATCACGACCT651CTTCAAGCGGTGCATTCCCACTTCTTTCACCTATTCCATTGATTGTTA
Brassica napus GSS, clone JBnB041D01, end read, primer SACL2(forward).
CU974914.2:138-155
TGTGGAACTCCTAATACATACATGTTACCT138CTTCAAGCGGTGCATTCCCACTTCTTTCACCTATTCCGTTAACTGTTA
BOT01-28I6TF BOT01 Brassica oleracea genomic clone BOT01-28I6, genomic survey sequence.
FI679894.1:601-618
TTGGAAGTGGATTTCTAGCAGTTCTTACCT601CTTCAAGCGGTGCATTCCCACTTCTTTCACCTATTCCATTGATTGTTA
BOT01-24E6TR BOT01 Brassica oleracea genomic clone BOT01-24E6, genomic survey sequence.
FI695877.1:564-581
TTGGAAGTGGATTTCTAGCAGTTCTTACCT564CTTCAAGCGGTGCATTCCCACTTCTTTCACCTATTCCATTGATTGTTA
HDE140J02.R HDE Setaria viridis genomic 3', genomic survey sequence.
KS072264.1:619-636
TAGGGCATGTGAGTGTGTTGCTTTCTCGAT619CTTCAAGCGGTGCATTCCTGATTGTATCCAAGATGTTGTAATCTCTTA
Brassica napus cultivar Xiang5A chromosome 1.
CP123876.1:37016982-37016999
TTGGATGTGGATTTCTAGCAGTTATTACCT37016982CTTCAAGCGGTGCATTCCCACTTCTTTCACCTATTCCATTGATTGTTA
Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:21784934-21784951
TGGGTAACACCATTGCGGGTGCTCTTACCT21784934CTTCAAGCGGTGCATTCCCACTTCTTTCGCCTATTCCATTAACTGTTA
Brassica napus cultivar Xiang5A chromosome 2.
CP151897.1:35771467-35771484
TTGGATGTGGATTTCTAGCAGTTATTACCT35771467CTTCAAGCGGTGCATTCCCACTTCTTTCACCTATTCCATTGATTGTTA
Brassica napus cultivar Xiang5A chromosome 3.
CP151898.1:21784977-21784994
TGGGTAACACCATTGCGGGTGCTCTTACCT21784977CTTCAAGCGGTGCATTCCCACTTCTTTCGCCTATTCCATTAACTGTTA
Brassica napus cultivar Xiang5A chromosome 12.
CP151907.1:63731631-63731648
TTGGAAGTGGATTTCTAGCAGTTCTTACCT63731631CTTCAAGCGGTGCATTCCCACTTCTTTCACCTATTCCATTGATTGTTA
Brassica napus cultivar Xiang5A chromosome 17.
CP151912.1:50934636-50934653
TGTGGAACTCCTAGTACATACATGTTACCT50934636CTTCAAGCGGTGCATTCCCACTTCTTTCGCCTATTCCGTTAACTGTTA
Brassica napus cultivar Xiang5A chromosome 17.
CP151912.1:50954483-50954500
TGTGGAACTCCTAGTACATACATGTTACCT50954483CTTCAAGCGGTGCATTCCCACTTCTTTCGCCTATTCCGTTAACTGTTA
Euglena gracilis isolate CCAP 1224/5Z chromosome 8.
CP154961.1:34891040-34891057
TTTCGCTTCGTTTTTGACAGGTCCCCAAAG34891040CTTCAAGCGGTGCATTCCTGTCTTTGTCCGCCCTGGTCGGTGCGCTGT
Euglena gracilis isolate CCAP 1224/5Z chromosome 8.
CP154961.1:35481595-35481612
TTTCGCCTCGTTTTTGACAGGTCCCCAAAG35481595CTTCAAGCGGTGCATTCCTGTCTTTGTCCGCCCTGGTCGGTGCGCTGT
Brassica napus genome assembly, chromosome: A02.
HG994356.1:31521700-31521717
TTGGATGTGGATTTCTAGCAGTTCTTACCT31521700CTTCAAGCGGTGCATTCCCACTTCTTTCACCTATTCCATTGATTGTTA
Brassica napus genome assembly, chromosome: A03.
HG994357.1:21771193-21771210
TGGGTAACACCATTGCGGGTGCTCTTACCT21771193CTTCAAGCGGTGCATTCCCACTTCTTTCGCCTATTCCATTAACTGTTA
Brassica napus genome assembly, chromosome: C02.
HG994366.1:59625967-59625984
TTGGAAGTGGATTTCTAGCAGTTCTTACCT59625967CTTCAAGCGGTGCATTCCCACTTCTTTCACCTATTCCATTGATTGTTA
Brassica napus genome assembly, chromosome: C07.
HG994371.1:44918463-44918480
TGTGGAACTCCTAGTACATACATGTTACCT44918463CTTCAAGCGGTGCATTCCCACTTCTTTCGCCTATTCCGTTAACTGTTA
Brassica napus genome assembly, chromosome: C07.
HG994371.1:44938303-44938320
TGTGGAACTCCTAGTACATACATGTTACCT44938303CTTCAAGCGGTGCATTCCCACTTCTTTCGCCTATTCCGTTAACTGTTA
Brassica rapa genome, scaffold: A02.
LR031573.1:29724458-29724475
TTGGATGTGGATTTCTAGCAGTTCTTACCT29724458CTTCAAGCGGTGCATTCCCACTTCTTTCACCTATTCCATTGATTGTTA
Brassica oleracea HDEM genome, scaffold: C2.
LR031874.1:60880501-60880518
TTGGAAGTGGATTTCTAGCAGTTCTTACCT60880501CTTCAAGCGGTGCATTCCCACTTCTTTCACCTATTCCATTGATTGTTA
Brassica oleracea HDEM genome, scaffold: C7.
LR031876.1:47779209-47779226
TGTGGAACTCCTAGTACATACATGTTACCT47779209CTTCAAGCGGTGCATTCCCACTTCTTTCGCCTATTCCGTTAACTGTTA
Brassica oleracea HDEM genome, scaffold: C7.
LR031876.1:47806843-47806860
TGTGGAACTCCTAGTACATACATGTTACCT47806843CTTCAAGCGGTGCATTCCCACTTCTTTCGCCTATTCCGTTAACTGTTA
Ananas comosus var. bracteatus genome assembly, chromosome: 8.
LR862136.1:21192510-21192527
TTGAGTCTTGGCTTGAGGGTGGTAGCTCCC21192510CTTCAAGCGGTGCATTCCGGAATTGTCACCACGGGGAGCGCAGTTCCG
Brassica rapa genome assembly, chromosome: A02.
LS974618.2:30656043-30656060
TTGGATGTGGATTTCTAGCAGTTCTTACCT30656043CTTCAAGCGGTGCATTCCCACTTCTTTCACCTATTCCATTGATTGTTA
Campylobacter coli BCH-10307 DNA, complete genome.
AP028338.1:1584115-1584132
CTTCAAAAAACTGCTCTTTATCATTAAAAG1584115CTTCAAGCGGTGCATTCCAAGTAAGGCTAAACATATATTTTTTATTAT
Campylobacter coli BCH-10328 DNA, complete genome.
AP028341.1:1523215-1523232
CTTCAAAAAACTGCTCTTTATCATTAAAAG1523215CTTCAAGCGGTGCATTCCAAGTAAGGCTAAACATATATTTTTTATTGT
Campylobacter coli strain BFR-CA-9557 genome.
CP011777.1:83442-83459
CTTCAAAAAACTGCTCTTTATCATTAAAAG83442CTTCAAGCGGTGCATTCCAAGTAAGGCTAAACATATATTTTTTATTAT
Prosthecochloris sp. CIB 2401, complete genome.
CP016432.1:839255-839272
CCTTCTTTCCATTTCTGAAAAGCGCATTTT839255CTTCAAGCGGTGCATTCCTTCAGACGAAAGAGGTGATGAGCTGGTTGA
Campylobacter coli strain YH503 chromosome, complete genome.
CP025281.1:1489498-1489515
CTTCAAAAAACTGCTCTTTATCATTAAAAG1489498CTTCAAGCGGTGCATTCCAAGTAAGGCTAAACATATATTTTTTATTAT
Campylobacter coli strain meC0280 chromosome, complete genome.
CP027639.1:1508200-1508217
CTTCAAAAAACTGCTCTTTATCATTAAAAG1508200CTTCAAGCGGTGCATTCCAAGTAAGGCTAAACATATATTTTTTATTAT
Campylobacter coli strain S9 chromosome, complete genome.
CP040239.1:1552707-1552724
CTTCAAAAAACTGCTCTTTATCATTAAAAG1552707CTTCAAGCGGTGCATTCCAAGTAAGGCTAAACATATATTTTTTATTGT
Campylobacter coli strain 2014D-0143 chromosome, complete genome.
CP059371.1:291129-291146
CTTCAAAAAACTGCTCTTTATCATTAAAAG291129CTTCAAGCGGTGCATTCCAAGTAAGGCTAAACATATATTTTTTATTGT
Campylobacter coli strain 14158-6 chromosome, complete genome.
CP092025.1:1579621-1579638
CTTCAAAAAACTGCTCTTTATCATTAAAAG1579621CTTCAAGCGGTGCATTCCAAGTAAGGCTAAACATATATTTTTTATTGT
Sphingomonas sp. SUN019 chromosome, complete genome.
CP096971.1:1086243-1086260
GCCCGGCCCTGCGGCGGCGGCTCACGCCGC1086243CTTCAAGCGGTGCATTCCCTCGGCAAGCGTCCAGAGCGCACGGTTGAG
Campylobacter coli strain BfR-CA-16258 chromosome, complete genome.
CP126350.1:1520282-1520299
CTTCAAAAAACTGCTCTTTATCATTAAAAG1520282CTTCAAGCGGTGCATTCCAAGTAAGGCTAAACATATATTTTTTATTGT
Campylobacter coli strain BfR-CA-16201 chromosome, complete genome.
CP126356.1:1529831-1529848
CTTCAAAAAACTGCTCTTTATCATTAAAAG1529831CTTCAAGCGGTGCATTCCAAGTAAGGCTAAACATATATTTTTTATTGT
Campylobacter coli strain CCS 289 08/401 chromosome, complete genome.
CP154434.1:269290-269307
CTTCAAAAAACTGCTCTTTATCATTAAAGG269290CTTCAAGCGGTGCATTCCAAGTAAGGCTAAACATATATTTTTTATTAT
Campylobacter coli strain CCS 265 07/14005 chromosome, complete genome.
CP154439.1:818174-818191
CTTCAAAAAACTGCTCTTTATCATTAAAGG818174CTTCAAGCGGTGCATTCCAAGTAAGGCTAAACATATATTTTTTATTAT
Campylobacter coli strain CVM N17C440 chromosome, complete genome.
CP169451.1:1647475-1647492
CTTCAAAAAACTGATCTTTATCATTAAAGG1647475CTTCAAGCGGTGCATTCCAAGTAAGGCTAAACATATATTTTTTATTAT
Campylobacter coli strain YH507 chromosome, complete genome.
CP172392.1:1539730-1539747
CTTCAAAAAACTGCTCTTTATCATTAAAAG1539730CTTCAAGCGGTGCATTCCAAGTAAGGCTAAACATATATTTTTTATTGT
Campylobacter coli strain YH505 chromosome, complete genome.
CP172396.1:1543932-1543949
CTTCAAAAAACTGCTCTTTATCATTAAAAG1543932CTTCAAGCGGTGCATTCCAAGTAAGGCTAAACATATATTTTTTATTGT
Campylobacter coli strain YH506 chromosome, complete genome.
CP172397.1:1573633-1573650
CTTCAAAAAACTGCTCTTTATCATTAAAAG1573633CTTCAAGCGGTGCATTCCAAGTAAGGCTAAACATATATTTTTTATTGT
Campylobacter coli strain 21MD01CB08-C chromosome, complete genome.
CP190392.1:1542590-1542607
CTTCAAAAAACTGCTCTTTATCATTAAAAG1542590CTTCAAGCGGTGCATTCCAAGTAAGGCTAAACATATATTTTTTATTAT
Agonopterix arenella genome assembly, chromosome: 1.
OV656689.1:7366823-7366840
TCCTTTACATAGAAAAGTTATCCAAAGGCC7366823CTTCAAGCGGTGCATTCCAAGACATAACACCTACCCCTAACACCAGTT
Timandra comae genome assembly, chromosome: 5.
OY292358.1:8781633-8781650
GCGCTACCGAGGTATGCATACCGTAGGAGC8781633CTTCAAGCGGTGCATTCCTCCCATATACCATACTCATTGCAGGTTGGA
Cyphastrea salae genome assembly, chromosome: 6.
OZ077368.1:37938491-37938508
CTATAACGGAAGCAAGCCCAAGCTACTTCC37938491CTTCAAGCGGTGCATTCCAAGTTTTTGAGATTGTTACATAACGTTCTC
Sequence 3198 from Patent WO2008034648.
FB783925.1:968-985
TAACAATCAATGGAATAGGTGAAAGAAGTG968GGAATGCACCGCTTGAAGAGGTCGTGATGGCTTTGAAATGTCGAGGAG
Sequence 3220 from Patent WO2008034648.
FB783947.1:914-931
TAACAATCAATGGAATAGGTGAAAGAAGTG914GGAATGCACCGCTTGAAGAGGTCGTGATGGCTTTGAAATGTCGAGGAG
Bn01b_04a19_A Bn01b_AAFC_ECORC_transgenic_Brassica_napus_overexpressing_BNCBF17_c onstitutively_frost_tolerant Brassica napus cDNA clone Bn01b_04a19, mRNA sequence.
CB686164.1:474-491
TAACAATCAATGGAATAGGTGAAAGAAGTG474GGAATGCACCGCTTGAAGAGGTCGTGATGGCTTTGAAATGTCGAGGAG
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_37573.
FX716726.1:237-254
TAACAATCAATGGAATAGGTGAAAGAAGTG237GGAATGCACCGCTTGAAGAGGTCGTGATGGCTTTGAAATGTCGAGGAG
BOHAM49TR BOHA Brassica oleracea genomic clone BOHAM49, genomic survey sequence.
BH454839.1:544-561
TAACAATCAATGGAATAGGTGAAAGAAGTG544GGAATGCACCGCTTGAAGAGGTAAGAACTGCTAGAAATCCACTTCCAA
1095456053741 Global-Ocean-Sampling_GS-31-01-01-1P3-1P8KB marine metagenome genomic clone 1061005708954 3', genomic survey sequence.
EK151542.1:3-20
CA3GGAATGCACCGCTTGAAGTTTTTATCGCTGCAATTGATAGGCTGGGGT
Genomic sequence for broccoli [Brassica oleracea L. (Italica group)] BAC clone B19N3, complete sequence.
AC149635.1:47657-47674
TAACAATCAATGGAATAGGTGAAAGAAGTG47657GGAATGCACCGCTTGAAGAGGTAAGAACTGCTAGAAATCCACTTCCAA
Brassica napus cultivar Yudal isopropyl malate synthase (MYJ24-1-BN-1) gene, partial cds.
AF258253.1:22-39
ATGGAATAGGTGAAAGAAGTG22GGAATGCACCGCTTGAAGAGGTAAGAACTGCTAGAAATCCACATCCAA
Eutrema japonicum cultivar Magic isolate CNU_PCGL_DJ_WASABI_2024 chromosome A07.
CP163467.1:3936735-3936752
TAACGGTCAATGGAATTGGTGAAAGAAGTG3936735GGAATGCACCGCTTGAAGAGGTAATATCTGATAGGCATTCCACATTAA
Brassica rapa subsp. rapa glucosinolate GS-Elong (GSL-Elong) gene, complete cds.
EF611254.1:2605-2622
TAACAATCAATGGAATAGGTGAAAGAAGTG2605GGAATGCACCGCTTGAAGAGGTAAGAACTGCTAGAAATCCACATCCAA
Isatis tinctoria methylthioalkylmalate synthase 1-1 (MAM1-1) gene, MAM1-1-MAM1 allele, complete cds.
MW413496.1:1598-1615
TAACGATCAACGGAATAGGTGAAAGAAGTG1598GGAATGCACCGCTTGAAGAGGTAAGATCTGCTAGGAATCTAGATCATA
Isatis tinctoria methylthioalkylmalate synthase 1-2 (MAM1-2) gene, MAM1-2-MAM1 allele, complete cds.
MW413497.1:1486-1503
TAACGGTTAACGGAATAGGCGAAAGAAGCG1486GGAATGCACCGCTTGAAGAGGTAAAATATACTAGAAGTTTCACAATGA
Adonis annua genome assembly, chromosome: 16.
OZ123191.1:684059877-684059894
CACCTAAAAACACTTACCAAGCTACTATTA684059877GGAATGCACCGCTTGAAGAACTATATGAGAGATTGTGTAAATCACTGG
Brassica nigra genome assembly, chromosome: 2.
OZ173172.1:51909664-51909681
TAACAGTTAACGGAATAGGCGAAAGGAGTG51909664GGAATGCACCGCTTGAAGAGGTAACATATACTTAGGAGCTCCACATTG
Campylobacter coli BCH-10879 DNA, complete genome.
AP028371.1:235178-235195
ATAATAAAAAATATATGTTTAGCCTTACTT235178GGAATGCACCGCTTGAAGCTTTTAATGATAAAGAGCAGTTTTTTGAAG
Campylobacter coli BCH-11476 DNA, complete genome.
AP028395.1:217346-217363
ATAATAAAAAATATATGTTCAGCCTTACTT217346GGAATGCACCGCTTGAAGCCTTTAATGATAAAGAGCAGTTTTTTGAAG
Campylobacter coli strain FDAARGOS_735 chromosome, complete genome.
CP046317.1:1659870-1659887
ATAATAAAAAATATATGTTTAGCCTTACTT1659870GGAATGCACCGCTTGAAGCTTTTAATGATAAAGAGCAGTTTTTTGAAG
[Pasteurella] aerogenes strain RCAD0728 chromosome, complete genome.
CP058953.1:423360-423377
AGGGTAGAAAACATATGCTTTCTTTAACTT423360GGAATGCACCGCTTGAAGCCTTCACTGATCCAAATGAATTCTTTAAAG
Campylobacter coli strain M8 chromosome, complete genome.
CP091310.1:238302-238319
ACAATAAAAAATATATGTTTAGCCTTACTT238302GGAATGCACCGCTTGAAGCTTTTAATGATAAAGAGCAGTTTTTTGAAG
Campylobacter coli strain BfR-CA-16110 chromosome, complete genome.
CP126358.1:250520-250537
ATAATAAAAAATATATGTTTAGCCTTACTT250520GGAATGCACCGCTTGAAGCTTTTAATGATAAAGAGCAGTTTTTTGAAG
Campylobacter coli strain CCS 1744/23 chromosome, complete genome.
CP154432.1:242204-242221
ATAATAAAAAATATATGTTTAGCCTTACTT242204GGAATGCACCGCTTGAAGCCTTTAATGATAAAGAGCAGTTTTTTGAAG
Campylobacter coli strain CCS 554 chromosome, complete genome.
CP154433.1:247056-247073
ATAATAAAAAATATATGTTTAGCCTTACTT247056GGAATGCACCGCTTGAAGCCTTTAATGATAAAGATCAGTTTTTTGAAG
Ascidia mentula genome assembly, chromosome: 8.
OX387204.1:12271575-12271592
AGATTCCGGGTGACCAAGCCCAGCGCGTTA12271575GGAATGCACCGCTTGAAGTCGCTAAAGCGCGCCATGATGCACAAAAAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTCAAGCGGTGCATTCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTCAAGCGGTGCATTCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.318 | 0.309 | search_plus_done; http://172.18.8.135:50800/match?q=CTTCAAGCGGTGCATTCC&k=0&no_gap=0&offset=0&limit=50
0.522 | 0.205 | search_minus_done; http://172.18.8.135:50800/match?q=GGAATGCACCGCTTGAAG&k=0&no_gap=0&offset=0&limit=2
0.538 | 0.016 | cgi_end;

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