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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:09:17, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Malus hybrid cultivar cultivar Flame chromosome 2.
CP141911.1:32588080-32588102
AGTTGATGAAGCATGATACAAAAAACGAAT32588080CTTCAAGTTCAGCATCAAGACAATACTAGTAGTAAACTTAGAGAGAGAGAGAG
Malus hybrid cultivar cultivar Flame chromosome 2.
CP141928.1:34990069-34990091
AGTTGATGAAGCATGATACAAAAAACGAAT34990069CTTCAAGTTCAGCATCAAGACAATACTAGTAGTAAACTTAGAGAGAGAGAGAG
Malus hybrid cultivar cultivar SH6 chromosome 2.
CP143359.1:3472477-3472499
CTCTCTCTCTCTCTAAGTTTACTACTAGTA3472477TTGTCTTGATGCTGAACTTGAAGATTCGTTTTTTGTATCATGCTTCATCAACT
Malus sylvestris genome assembly, chromosome: 2.
OU696504.1:3621895-3621917
CTCTCTCTCTCTCTAAGTTTACTACTAGTA3621895TTGTCTTGATGCTGAACTTGAAGATTCGTTTTTTGTATCATGCTTCATCAACT
Malus domestica genome assembly, chromosome: 2.
OU696678.1:3472413-3472435
CTCTCTCTCTCTCTAAGTTTACTACTAGTA3472413TTGTCTTGATGCTGAACTTGAAGATTCGTTTTTTGTATCATGCTTCATCAACT
Malus domestica genome assembly, chromosome: 2.
OU744543.1:3701233-3701255
CTCTCTCTCTCTCTAAGTTTACTACTAGTA3701233TTGTCTTGATGCTGAACTTGAAGATTCGTTTTTTGTATCATGCTTCATCAACT
Malus domestica genome assembly, chromosome: 2.
OU744954.1:3710091-3710113
CTCTCTCTCTCTCTAAGTTTACTACTAGTA3710091TTGTCTTGATGCTGAACTTGAAGATTCGTTTTTTGTATCATGCTTCATCAACT
Malus domestica genome assembly, chromosome: 2.
OU744992.1:3472319-3472341
CTCTCTCTCTCTCTAAGTTTACTACTAGTA3472319TTGTCTTGATGCTGAACTTGAAGATTCGTTTTTTGTATCATGCTTCATCAACT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTCAAGTTCAGCATCAAGACAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTCAAGTTCAGCATCAAGACAA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.116 | 0.107 | search_plus_done; http://172.18.8.135:50400/match?q=CTTCAAGTTCAGCATCAAGACAA&k=0&no_gap=0&offset=0&limit=50
0.145 | 0.029 | search_minus_done; http://172.18.8.135:50400/match?q=TTGTCTTGATGCTGAACTTGAAG&k=0&no_gap=0&offset=0&limit=48
0.149 | 0.004 | cgi_end;

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