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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:31:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sciurus carolinensis genome assembly, chromosome: 10.
LR738599.1:117680997-117681016
CAAAGCCATCTAACAAAAAGGACTTTTTTT117680997CTTCACCCACCACCTTTTCTAAGTATATCTAGTATGGCTTCTGCTTATTT
Grapholita molesta isolate lab01 chromosome gm07.
CP053126.1:13677529-13677548
TTTTGCTGCGACTTTGTATAAATAAAACTT13677529CTTCACCCACCACCTTTTCTATTTAGGTGAATATGCACACAATTGTTCAA
Acleris holmiana genome assembly, chromosome: 29.
OX438791.1:3909850-3909869
TCAGCCAGGCTATTAATTCGGAACGGTTTA3909850CTTCACCCACCACCTTTTCTGCCGACTGTCTTGCGGATGGAATCGTGTGA
Bos taurus genome assembly, chromosome: Bta22.
OY997250.1:46531528-46531547
TTCCGGAATGCACCTGAAAATAAAAATTCT46531528AGAAAAGGTGGTGGGTGAAGAGGAGACAAACAGACAAAACACATTTTATA
Geotrypetes seraphini genome assembly, chromosome: 2.
LR699147.1:54048215-54048234
CAGGAATACATTAAGGAAATACTTCTTTAC54048215AGAAAAGGTGGTGGGTGAAGACAAAACGGTGTCTGAATTTAAGAAAGCAT
Thalassophryne amazonica genome assembly, chromosome: 13.
LR722978.1:88771372-88771391
TAGTCCAGGTCCAAAACATGATCATTTATA88771372AGAAAAGGTGGTGGGTGAAGAAACCATTCTGTGTTTTGTAAGCAGCCTAT
Atr01b_55_A07_C010.b1 FGP Male Amborella trichopoda Amborella trichopoda cDNA clone 122KGu_B14 3', mRNA sequence.
FD428347.1:521-540
GAGAGAGAGAGAGAGAGAGATAAGGCGAGC521AGAAAAGGTGGTGGGTGAAGGGGCTAGTATTTTCCAAGTAGAGGGAATTT
Hedera helix genome assembly, chromosome: 4.
OX359267.1:34694409-34694428
GTAGGAAAGAGAAAGAAAAAAGGTGGAGAG34694409AGAAAAGGTGGTGGGTGAAGAGGTGGTGGGTGAAGAGGACAATGTGGTTT
Pinctada fucata DNA, chromosome 10, nearly complete sequence, Principal Pseudohaplotype.
AP027111.1:18674174-18674193
GTATCATGGTATGAAGTATATGTTAAAGAT18674174AGAAAAGGTGGTGGGTGAAGCGAGCATAATTTTTTTATATAACATTTATC
Pinctada fucata DNA, chromosome 10, nearly complete sequence, Alternate Pseudohaplotype.
AP027125.1:20508381-20508400
GTATCATGGTATGAAGTAAATGTTAAAGAT20508381AGAAAAGGTGGTGGGTGAAGGGAGCATAATTTTTTTATATAACATTTATC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTCACCCACCACCTTTTCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTCACCCACCACCTTTTCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.317 | 0.308 | search_plus_done; http://172.18.8.135:50400/match?q=CTTCACCCACCACCTTTTCT&k=0&no_gap=0&offset=0&limit=50
0.532 | 0.215 | search_minus_done; http://172.18.8.135:50400/match?q=AGAAAAGGTGGTGGGTGAAG&k=0&no_gap=0&offset=0&limit=47
0.537 | 0.005 | cgi_end;

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