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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 08:15:21, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pyrus pyrifolia cultivar Housui mRNA, clone: TsuENH025_05729m, 5' end sequence.
AB450707.1:1204-1225
AGCTTGAAGCTTTAATGGCGGCTCTTCAGT1204CTTCACCCCATCGAATCAAAACATTGAATTGAATTAAGCCTGTGCTGCTCTT
Mdfrg3155G14.g1 Apple_EST_Mdfrg Malus domestica cDNA 5' similar to sp|P43281|METL_LYCES S-adenosylmethionine synthetase 2 (Methionine adenosyltransferase 2) (AdoMet synthetase 2) pir|S38875 methionine
GO523659.1:487-508
AGCTTAAAGCTTTAATGGCGGCTCTTCAGT487CTTCACCCCATCGAATCAAAACATTGAATTGAATTAAGCCTCTGCTGCTCTC
Pyrus pyrifolia mRNA, clone: NFR1_20_02, 5' end sequence, expressed in fruit.
HX747261.1:618-639
AGCTTGAAGCTTTAATGGCGGCTCTTCAGT618CTTCACCCCATCGAATCAAAACATTGAATTGAATTAAGCCTGTGCTGCTCTT
Pyrus pyrifolia mRNA, clone: NFR1_20_17, 5' end sequence, expressed in fruit.
HX747276.1:620-641
AGCTTGAAGCTTTAATGGCGGCTCTTCAGT620CTTCACCCCATCGAATCAAAACATTGAATTGAATTAAGCC
Pyrus pyrifolia mRNA, clone: NFR3_14_51, 5' end sequence, expressed in fruit.
HX752333.1:387-408
AGCTTGAAGCTTTAATGGCGGCTCTTCAGT387CTTCACCCCATCGAATCAAAACATTGAATTGAATTAAGCCTGTGCTGCTCTT
Pyrus pyrifolia mRNA, clone: NFR3_14_77, 5' end sequence, expressed in fruit.
HX752358.1:387-408
AGCTTGAAGCTTTAATGGCGGCTCTTCAGT387CTTCACCCCATCGAATCAAAACATTGAATTGAATTAAGCCTGTGCTGCTCTT
Pyrus pyrifolia mRNA, clone: NFR5_07_55, 5' end sequence, expressed in fruit.
HX755770.1:217-238
AGCTTGAAGCTTTAATGGCGGCTCTTCAGT217CTTCACCCCATCGAATCAAAACATTGAATTGAATTAAGCCTGTGCTGCTCTT
Pyrus pyrifolia mRNA, clone: NFR6_09_18, 5' end sequence, expressed in fruit.
HX759556.1:342-363
ANNTTGAAGCTTTAATGGCGGCTCTTCNGT342CTTCACCCCATCGAATCAAAACATTGAATTGAATTAAGNCTGTNCTGCTCTT
TSA: Pyrus pyrifolia mRNA, contig: contig_613.
FX432578.1:582-603
AGCTTGAAGCTTTAATGGCGGCTCTTCAGT582CTTCACCCCATCGAATCAAAACATTGAATTGAATTAAGCCTGTGCTGCTCTT
SSR_PbR19 Pyrus x bretschneideri leaf SSR Pyrus x bretschneideri genomic clone PbR19 5', genomic survey sequence.
GS928033.1:19-40
TAATGGCGGCTCTTCAGT19CTTCACCCCATCGAATCAAAACATTGAATTGAATTAAGCCTGTGCTGCTCCT
SSR_PbR15 Pyrus communis leaf SSR Pyrus communis genomic clone PbR15 5', genomic survey sequence.
GS928049.1:19-40
TAATGGCGGCTCTTCAGT19CTTCACCCCATCGAATCAAAACATTGAATTGAATTAAGCCTGTTCTGCTCTT
SSR_PbR16 Pyrus communis leaf SSR Pyrus communis genomic clone PbR16 5', genomic survey sequence.
GS928050.1:19-40
TAATGGCGGCTCTTCAGT19CTTCACCCCATCGAATCAAAACATTGAATTGAATTAAGCCTGTGCTGCTCTT
Pyrus communis genome assembly, chromosome: 6.
OY757073.1:21432887-21432908
AGCTTGAAGCTTTAATGGCGGCTCTTCAGT21432887CTTCACCCCATCGAATCAAAACATTGAATTGAATTAAGCCTGTGCTGCTCTT
Mdfrg3152J20.g1 Apple_EST_Mdfrg Malus domestica cDNA 5' similar to sp|P49611|METK_BRAJU S-adenosylmethionine synthetase (Methionine adenosyltransferase) (AdoMet synthetase) emb|CAA56590.1| S-adenosyl-
GO525435.1:330-351
GAGAGCAGCAGAGGCTTAATTCAATTCAAT330GTTTTGATTCGATGGGGTGAAGACTGAAGAGCCGCCATTAAAGCTTTAAGCT
Mdfwg2100L03_e21379.g1 Apple_EST_Mdfwg Malus domestica cDNA 5' similar to sp|P49611|METK_BRAJU S-adenosylmethionine synthetase (Methionine adenosyltransferase) (AdoMet synthetase) emb|CAA56590.1| S-ad
GO558858.1:396-417
GAGAGCACCAGAGGCTTAATTCAATTCAAT396GTTTTGATTCGATGGGGTGAAGACTGAAGAGCCGCCATTAAAGCTTTAAGCT
TSA: Pyrus x bretschneideri Unigene42485_XinShao mRNA sequence.
JR633994.1:1530-1551
AAGAGCAGCACAGGCTTAATTCAATTCAAT1530GTTTTGATTCGATGGGGTGAAGACTGAAGAGCCGCCATTAAAGCTTCAAGCT
SSR_PbR18 Pyrus x bretschneideri leaf SSR Pyrus x bretschneideri genomic clone PbR18 5', genomic survey sequence.
GS928032.1:248-269
AAGAGCAGCACAGGCTTAATTCAATTCAAT248GTTTTGATTCGATGGGGTGAAGACTGAAGAGCCGCCATTA
SSR_PbR13 Pyrus communis leaf SSR Pyrus communis genomic clone PbR13 5', genomic survey sequence.
GS928047.1:259-280
AAGAGCAGCACAGGCTTAATTCAATTCAAT259GTTTTGATTCGATGGGGTGAAGACTGAAGAGCCGCCATTA
SSR_PbR14 Pyrus communis leaf SSR Pyrus communis genomic clone PbR14 5', genomic survey sequence.
GS928048.1:245-266
AAGAGCAGCACAGGCTTAATTCAATTCAAT245GTTTTGATTCGATGGGGTGAAGACTGAAGAGCCGCCATTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTCACCCCATCGAATCAAAAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTCACCCCATCGAATCAAAAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.167 | 1.158 | search_plus_done; http://172.18.8.135:50400/match?q=CTTCACCCCATCGAATCAAAAC&k=0&no_gap=0&offset=0&limit=50
1.549 | 0.382 | search_minus_done; http://172.18.8.135:50400/match?q=GTTTTGATTCGATGGGGTGAAG&k=0&no_gap=0&offset=0&limit=37
1.553 | 0.004 | cgi_end;

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