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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:32:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Dianthus caryophyllus mRNA, clone: CES04A22, 5' end sequence.
FY383626.1:144-163
CCTACTACTTCCTTCTATTGCTGTAGTAAA144CTTCATCAATTCTCCGCCATTGAAGCTTCTTCATCATCATCATCTTCTTC
Dianthus caryophyllus mRNA, clone: CES05E16, 5' end sequence.
FY384093.1:152-171
CCTACTACTTCCTTCTATTGCTGTAGTAAA152CTTCATCAATTCTCCGCCATTGAAGCTTCTTCATCATCATCATCTTCTTC
TSA: Dianthus caryophyllus mRNA, contig: CAK09.245.C1.
FX296972.1:150-169
CCTACTACTTCCTTCTATTGCTGTAGTAAA150CTTCATCAATTCTCCGCCATTGAAGCTTCTTCATCATCATCATCTTCTTC
Cottoperca gobio genome assembly, chromosome: 7.
LR131937.1:5361377-5361396
GCAAATGTTCAGTTCTCCTTCCTGGGAGAG5361377ATGGCGGAGAATTGATGAAGGCCAATCAAACACTTCTACGCTTGTTTAGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTCATCAATTCTCCGCCAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTCATCAATTCTCCGCCAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.305 | 0.296 | search_plus_done; http://172.18.8.135:50400/match?q=CTTCATCAATTCTCCGCCAT&k=0&no_gap=0&offset=0&limit=50
0.408 | 0.103 | search_minus_done; http://172.18.8.135:50400/match?q=ATGGCGGAGAATTGATGAAG&k=0&no_gap=0&offset=0&limit=47
0.409 | 0.001 | cgi_end;

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