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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 11:24:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Heterocephalus glaber genome assembly, chromosome: 6.
OX090946.1:96103008-96103027
CTTTAGCCTTCCAACACAGAGTCTATTCAC96103008CTTCCAACAGACTCACTCCAGTGACTCCACAGTGAGCTTTCAGGCCTTTA
Heterocephalus glaber genome assembly, chromosome: 11.
OZ001076.1:94670551-94670570
CTTTAGCCTTCCAACACAGAGTCTATTCAC94670551CTTCCAACAGACTCACTCCAGTGACTCCACAGTGAGCTTTCAGGCCTTTA
Heterocephalus glaber genome assembly, chromosome: 11.
OZ001119.1:95308179-95308198
CTTTAGCCTTCCAACACAGAGTCTATTCAC95308179CTTCCAACAGACTCACTCCAGTGACTCCACAGTGAGCTTTCAGGCCTTTA
Malus domestica genome assembly, chromosome: 11.
OU696687.1:2475069-2475088
CAAAGCAAAGCACCCCTCTGTGAAAGATGA2475069CTTCCAACAGACTCACTCCATTTTCATACCTGTTGCAAATAGGTATAAAC
Malus domestica genome assembly, chromosome: 11.
OU744963.1:2566385-2566404
CAAAGCAAAGCACCCCTCTGTGAAAGATGA2566385CTTCCAACAGACTCACTCCATTTTCATACCTGTTGCAAATAGGTATAAAC
Heterocephalus glaber genome assembly, chromosome: 6.
OX090914.1:18160146-18160165
TAAAGGCCTGAAAGCTCACTGTGGAGTCAC18160146TGGAGTGAGTCTGTTGGAAGGTGAATAGACTCTGTGTTGGAAGGCTAAAG
Lutra lutra genome assembly, chromosome: 1.
LR738403.1:14912958-14912977
TCCTCTCTTGTTCTAATCTAATTTAGAATT14912958TGGAGTGAGTCTGTTGGAAGAAGTAAGACAAATTCTATCGACTGTGGAAC
Stratiomys singularior genome assembly, chromosome: 5.
OX940881.1:97294536-97294555
TCGACCTTCGTAATTGAAGTACGCGTTCGA97294536TGGAGTGAGTCTGTTGGAAGCATCACATGTGGTAGACCAAGTCCCATGAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTCCAACAGACTCACTCCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTCCAACAGACTCACTCCA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.174 | 0.166 | search_plus_done; http://172.18.8.135:50400/match?q=CTTCCAACAGACTCACTCCA&k=0&no_gap=0&offset=0&limit=50
0.264 | 0.090 | search_minus_done; http://172.18.8.135:50400/match?q=TGGAGTGAGTCTGTTGGAAG&k=0&no_gap=0&offset=0&limit=45
0.266 | 0.002 | cgi_end;

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