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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:04:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Rhinatrema bivittatum genome assembly, chromosome: 1.
LR584387.1:573111983-573112002
CAGGATTATGCAGATGAATGGCTTAAGACC573111983CTTCCCTCCAAAATGAAGCATTGTGTGGAGTCCTCGGAACGCTTAGGAGT
TSA: Ictalurus punctatus aby_k53:1092916 mRNA sequence.
JT415679.1:1909-1928
AGGAGCAAAAGCGTCAGCTCACACCAGGCT1909CTTCCCTCCAAAATGAAGCACCCTATGCCTATGAATCACCCTTCCTTGTC
TSA: Ictalurus punctatus aby_k21:3510249 mRNA sequence.
JT421287.1:693-712
AGGAGCAAAAGCGTCAGCTCACACCAGGCT693CTTCCCTCCAAAATGAAGCACCCTATGCCTATGAATCACCCTTCCTTGTC
Humulus lupulus genome assembly, chromosome: 9.
OY720656.1:39491872-39491891
TGGGAAGACGTCCCTATCCTGACTGCTAAG39491872CTTCCCTCCAAAATGAAGCACTTGAGCTCGCGTTCTCGTGCCTCTATCCC
Sarcophilus harrisii genome assembly, chromosome: 4.
LR735557.1:104271053-104271072
AAAAGTGCTCATGCCTTCCCTTCTTTTGTT104271053TGCTTCATTTTGGAGGGAAGAGGTAACACTCCCCACTAATGCCATCTCTC
Scyliorhinus canicula genome assembly, chromosome: 9.
LR744038.1:41859386-41859405
GTGCTACCGTGCTGCCTTTCTTGTCTTCAA41859386TGCTTCATTTTGGAGGGAAGGCAAAGAACAAATGGACCCAGGGCTCAATG
TSA: Ictalurus punctatus aby_k77:654442 mRNA sequence.
JT316747.1:6443-6462
GACAAGGAAGGGTGATTCATAGGCATAGGG6443TGCTTCATTTTGGAGGGAAGAGCCTGGTGTGAGCTGACGCTTTTGCTCCT
Musa troglodytarum cultivar karat chromosome 2.
CP097504.1:41488933-41488952
GGGTAAAAAAAATCTGAGCAGGACAATCGA41488933TGCTTCATTTTGGAGGGAAGAGGAGGGTTTGAAATATATTCCATTGGCGG
Musa acuminata subsp. malaccensis isolate AA chromosome 2.
CP126371.1:24293863-24293882
AGTAAAAACAAATCAGAGCATGGCAATTGA24293863TGCTTCATTTTGGAGGGAAGAGGAGAGTTTGAAATATATTCCATTGGCGC
Musa acuminata subsp. malaccensis isolate AA chromosome 13.
CP126382.1:24399731-24399750
AGTAAAAACAAATCAGAGCATGGCAATTGA24399731TGCTTCATTTTGGAGGGAAGAGGAGAGTTTGAAATATATTCCATTGGCGC
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A02.
HG996467.1:22932315-22932334
AGTAAAAACAAATCAGAGCATGGCAATTGA22932315TGCTTCATTTTGGAGGGAAGAGGAGAGTTTGAAATATATTCCATTGGCGC
Musa schizocarpa genome assembly, chromosome: S02.
LS990916.1:24844882-24844901
GAAAAAAAAAAATCTGAGCATGGCAATTGA24844882TGCTTCATTTTGGAGGGAAGAGGAGAGTTTGAAATATATTCCATTGGCTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTCCCTCCAAAATGAAGCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTCCCTCCAAAATGAAGCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.213 | 0.204 | search_plus_done; http://172.18.8.135:50400/match?q=CTTCCCTCCAAAATGAAGCA&k=0&no_gap=0&offset=0&limit=50
0.345 | 0.132 | search_minus_done; http://172.18.8.135:50400/match?q=TGCTTCATTTTGGAGGGAAG&k=0&no_gap=0&offset=0&limit=46
0.351 | 0.006 | cgi_end;

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