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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-15 13:38:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Trifolium pratense DNA, clone:RC0432f.ab1.
DE245391.1:101-120
TGTTTTAGCTTCCATGGTAAATTGTGTCCT101CTTCGGTGCAATTGAAGGTTTTGATCTCTTTGAAAACCTTTGTTGCATAT
Trifolium subterraneum genome assembly, chromosome: 3.
OX637463.1:13762903-13762922
TGTTTAAGCTTCCATGGTAAATTGTGTCCT13762903CTTCGGTGCAATTGAAGGTTTTGATCTCTTTGAAAACCTTTGTTACATAT
Trifolium repens mRNA, clone: WCC17m06_087, unspecified EST.
FY460158.1:458-477
ATATGCAACAAAGGTTTTCAAAGAGACCAA458AACCTTCAATTGCACCGAAGAGGACACAATTTACCATGGAAGCTGAAACA
Trifolium repens isolate ACLI19 chromosome 01_Pall.
CP125837.1:46598715-46598734
ATATGTAACAAAGGTTTTCAAAGAGACCAA46598715AACCTTCAATTGCACCGAAGAGGACACAATTTACCATGGAAGCTGAAACA
Potentilla anserina genome assembly, chromosome: 6.
OW176986.1:2569788-2569807
ATTTGCAAGAAAGGGTTCCAAAGGGACCAA2569788AACCTTCAATTGCACCGAAGAGGCCACAACTTGCCATGGAAGCTTAAACA
Trifolium dubium genome assembly, chromosome: 3.
OX638064.1:48146321-48146340
ATATGCAACAAAGGTTTTCAAAGAGACCAA48146321AACCTTCAATTGCACCGAAGAGGACACAATTTACCATGGAAGCTTAAACA
Trifolium dubium genome assembly, chromosome: 13.
OX638074.1:26249667-26249686
ATATGCAACAAAGGTTTTCAAAGAGATCAA26249667AACCTTCAATTGCACCGAAGAGGACACAATTTACCATGGAAGCTTAAACA
Trifolium fragiferum genome assembly, chromosome: 8.
OX940796.1:47161765-47161784
ATATGTAACAAAGGTTTTCAAAGAGACCAA47161765AACCTTCAATTGCACCGAAGAGGACATAATTTACCATGGAAATTGAAACA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTCGGTGCAATTGAAGGTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTCGGTGCAATTGAAGGTT | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.248 | 0.240 | search_plus_done; http://172.18.8.135:50400/match?q=CTTCGGTGCAATTGAAGGTT&k=0&no_gap=0&offset=0&limit=50
0.459 | 0.211 | search_minus_done; http://172.18.8.135:50400/match?q=AACCTTCAATTGCACCGAAG&k=0&no_gap=0&offset=0&limit=48
0.463 | 0.004 | cgi_end;

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