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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 12:03:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Apodemus sylvaticus genome assembly, chromosome: 17.
OX359314.1:28055508-28055527
CTTGAGAGTCCATGTCCACAAAAGCAGCTT28055508CTTCGTCTCCTCTCCCTCCTTTCTCAGATCTGCCTCACTCTGCTGCGCTC
Erinaceus europaeus genome assembly, chromosome: 18.
OX485828.1:16782339-16782358
CTTCCTTCCTTCCTTCCTTCATTTCTACTT16782339CTTCGTCTCCTCTCCCTCCTCCTCCTCCTGTTTTCTTGTTTTGTTTTTCG
Symphodus melops genome assembly, chromosome: 12.
OX393536.1:6815211-6815230
GCTGAGGCGGCAGGCCTATAGGAGGACCAC6815211CTTCGTCTCCTCTCCCTCCTGCTCCTCAAGGCCTTACTGTATTATTCTGT
Symphodus melops genome assembly, chromosome: 21.
OX393545.1:5459832-5459851
CTCGCTTTAATTCTTCACTCCCCTCTCATT5459832CTTCGTCTCCTCTCCCTCCTTCTCTGTCTGTATTCCCACACTGTTGGATG
Blennius ocellaris genome assembly, chromosome: 17.
OY730217.1:5481021-5481040
TCCCGCACCATCTTTCTCTCCCTCACCAGC5481021CTTCGTCTCCTCTCCCTCCTCCTCCTCCGCCTCCTCCTCCTCCCCTTCTC
000817AALB001384HT (AALB) Royal Gala 150 DAFB fruit cortex Malus domestica cDNA clone AALB001384, mRNA sequence.
CN865695.1:122-141
TAAATACTGGGGACCATGCACAGGGTTCTT122CTTCGTCTCCTCTCCCTCCTGGAACCCAGAGACTCCTGCCTTTTATGGAG
010831ABDA001623HT (ABDA) Royal Gala fruit stored for 24 hours under low oxygen/high CO2 Malus domestica cDNA clone ABDA001623, mRNA sequence.
CN904406.1:266-285
TAAATACTGGGGACCATGCACAGGGTTCTT266CTTCGTCTCCTCTCCCTCCTGGAACCCAGAGACTCCTGCCTTTTATGGAG
010928ABDA003902HT (ABDA) Royal Gala fruit stored for 24 hours under low oxygen/high CO2 Malus domestica cDNA clone ABDA003902, mRNA sequence.
CN905414.1:274-293
TAAATACTGGGGACCATGCACAGGGTTCTT274CTTCGTCTCCTCTCCCTCCTGGAACCCAGAGACTCCTGCCTTTTATGGAG
010928ABDA004377HT (ABDA) Royal Gala fruit stored for 24 hours under low oxygen/high CO2 Malus domestica cDNA clone ABDA004377, mRNA sequence.
CN905592.1:266-285
TAAATACTGGGGACCATGCACAGGGTTCTT266CTTCGTCTCCTCTCCCTCCTGGAACCCAGAGACTCCTGCCTTTTATGGAG
010929ABDA005229HT (ABDA) Royal Gala fruit stored for 24 hours under low oxygen/high CO2 Malus domestica cDNA clone ABDA005229, mRNA sequence.
CN905938.1:273-292
TAAATACTGGGGACCATGCACAGGGTTCTT273CTTCGTCTCCTCTCCCTCCTGGAACCCAGAGACTCCTGCCTTTTATGGAG
010929ABDA005597HT (ABDA) Royal Gala fruit stored for 24 hours under low oxygen/high CO2 Malus domestica cDNA clone ABDA005597, mRNA sequence.
CN906072.1:266-285
TAAATACTGGGGACCATGCACAGGGTTCTT266CTTCGTCTCCTCTCCCTCCTGGAACCCAGAGACTCCTGCCTTTTATGGAG
010930ABDA006013HT (ABDA) Royal Gala fruit stored for 24 hours under low oxygen/high CO2 Malus domestica cDNA clone ABDA006013, mRNA sequence.
CN906265.1:266-285
TAAATACTGGGGACCATGCACAGGGTTCTT266CTTCGTCTCCTCTCCCTCCTGGAACCCAGAGACTCCTGCCTTTTATGGAG
030210ABPB005919HT (ABPB) M9 root tips Malus domestica cDNA clone ABPB005919, mRNA sequence.
CN919157.1:152-171
TAAATACTGGGGACCATGCACAGGGTTCTT152CTTCGTCTCCTCTCCCTCCTGGAACCCAGAGACTCCTGCCTTTTATGGAG
TSA: Pyrus pyrifolia mRNA, contig: contig_42909.
FX407926.1:135-154
TAAATACTGGGGACCATGCACAGGGTTCTT135CTTCGTCTCCTCTCCCTCCTGGAACCCAGAGACTCCTGCCTTTTATGGAG
Rattus norvegicus clone CH230-216C12, WORKING DRAFT SEQUENCE.
AC127187.3:190055-190074
TGGGTACATCCTGCTTAGCACCTACCCTGC190055CTTCGTCTCCTCTCCCTCCTCCAGGATGGTACAGCTTCACACGCATCCTT
Rattus norvegicus clone CH230-62A9, WORKING DRAFT SEQUENCE, 2 ordered pieces.
AC131146.4:169972-169991
TGGGTACATCCTGCTTAGCACCTACCCTGC169972CTTCGTCTCCTCTCCCTCCTCCAGGATGGTACAGCTTCACACGCATCCTT
Rattus norvegicus clone CH230-280L14, WORKING DRAFT SEQUENCE, 5 unordered pieces.
AC133313.2:869-888
TGGGTACATCCTGCTTAGCACCTACCCTGC869CTTCGTCTCCTCTCCCTCCTCCAGGATGGTACAGCTTCACACGCATCCTT
Prunus dulcis DNA, pseudomolecule Pd06.
AP019302.1:1446260-1446279
ATATTGGGGACCATGTACAGGGTTCTTCTT1446260CTTCGTCTCCTCTCCCTCCTGGAACCCAGAGACTCCTGCCTTTTATGGAG
Cryptococcus wingfieldii strain CBS7118 chromosome 11, complete sequence.
CP034271.1:251840-251859
GCGCCATCACCCCGGAACGTTTCTCTCCAA251840CTTCGTCTCCTCTCCCTCCTCTCCCACCTCTGCAAACCACACGCCCGAGT
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141920.1:2556751-2556770
TAAATACTGGGGACCATGCACAGGGTTCTT2556751CTTCGTCTCCTCTCCCTCCTGGAACCCAGAGACTCCTGCCTTTTATGGAG
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2631449-2631468
TAAATACTGGGGACCATGCACAGGGTTCTT2631449CTTCGTCTCCTCTCCCTCCTGGAACCCAGAGACTCCTGCCTTTTATGGAG
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:2711151-2711170
TAAATACTGGGGACCATGCACAGGGTTCTT2711151CTTCGTCTCCTCTCCCTCCTGGAACCCAGAGACTCCTGCCTTTTATGGAG
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141980.1:2701713-2701732
TAAATACTGGGGACCATGCACAGGGTTCTT2701713CTTCGTCTCCTCTCCCTCCTGGAACCCAGAGACTCCTGCCTTTTATGGAG
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2618024-2618043
TAAATACTGGGGACCATGCACAGGGTTCTT2618024CTTCGTCTCCTCTCCCTCCTGGAACCCAGAGACTCCTGCCTTTTATGGAG
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143385.1:2631303-2631322
TAAATACTGGGGACCATGCACAGGGTTCTT2631303CTTCGTCTCCTCTCCCTCCTGGAACCCAGAGACTCCTGCCTTTTATGGAG
Kwoniella sp. DSM 27419 chromosome 2.
CP144072.1:612069-612088
TCCCCTCTCCTGACCTCTGCCTCTCTGATC612069CTTCGTCTCCTCTCCCTCCTCCGGACCCTATCCCGCTCACTCTTGCGGAT
Haematococcus lacustris strain UTEX 2505 chloroplast, complete genome.
MG677935.1:156344-156363
CCCTCCTACCCTACGGCTCCGGCTCTACCA156344CTTCGTCTCCTCTCCCTCCTACCCTACGGCTCCGGTCCGGTACGGCTCCG
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:2725723-2725742
TAAATACTGGGGACCATGCACAGGGTTCTT2725723CTTCGTCTCCTCTCCCTCCTGGAACCCAGAGACTCCTGCCTTTTATGGAG
Malus domestica genome assembly, chromosome: 11.
OU696687.1:2713981-2714000
TAAATACTGGGGACCATGCACAGGGTTCTT2713981CTTCGTCTCCTCTCCCTCCTGGAACCCAGAGACTCCTGCCTTTTATGGAG
Malus domestica genome assembly, chromosome: 11.
OU744552.1:2790993-2791012
TAAATACTGGGGACCATGCACAGGGTTCTT2790993CTTCGTCTCCTCTCCCTCCTGGAACCCAGAGACTCCTGCCTTTTATGGAG
Malus domestica genome assembly, chromosome: 11.
OU744963.1:2830945-2830964
TAAATACTGGGGACCATGCACAGGGTTCTT2830945CTTCGTCTCCTCTCCCTCCTGGAACCCAGAGACTCCTGCCTTTTATGGAG
Malus domestica genome assembly, chromosome: 11.
OU745001.1:2775206-2775225
TAAATACTGGGGACCATGCACAGGGTTCTT2775206CTTCGTCTCCTCTCCCTCCTGGAACCCAGAGACTCCTGCCTTTTATGGAG
Nitzschia sp. DOCU1 genome assembly, chromosome: 15.
OX595999.1:980578-980597
TTCTGGCTTCGTGTCCCGGGAGGAAGCTTC980578CTTCGTCTCCTCTCCCTCCTTTTCTGCGGAACGCCGGCGTCGTGACGGTG
Sphagnum contortum genome assembly, chromosome: 6.
OY987281.1:9521643-9521662
GTACTGCACCAACATTTCTGCTGGTGGTGC9521643CTTCGTCTCCTCTCCCTCCTGGGCTCCGATTGCCAATCATGTTTGCGCGG
Dryas octopetala genome assembly, chromosome: 1.
OY992832.1:32604393-32604412
TCGAGCACATCTCTTCCTCCTGCTTCCTTC32604393CTTCGTCTCCTCTCCCTCCTCTCCTCCCCGATCTCTTCTCCCTCCCTCCC
Oscheius tipulae isolate CEW1 chromosome IV.
CP059031.1:5744008-5744027
AATGAAATCTCCCAACGTTAGCCCGGGTCT5744008CTTCGTCTCCTCTCCCTCCTCTTCCCACTCGACCACCTCTTCCTCACTCT
Eristalis pertinax genome assembly, chromosome: X.
OU026150.1:1964139-1964158
CGTCGATTTTCTTCAAATTTGTGGTATGTA1964139CTTCGTCTCCTCTCCCTCCTCCGCCTCTTCCACCCATTTTTCATCCAAAA
Bemisia tabaci genome assembly, chromosome: 5.
OU963866.1:33873977-33873996
TTTCTTCTTCTTCTTCTTCTTCTTCTTCTT33873977CTTCGTCTCCTCTCCCTCCTTCTTGGTCCCCTCTTACTTCATATTCCTCT
Tiphia femorata genome assembly, chromosome: 8.
OX090902.1:10819973-10819992
TTATTTATTGCTTCTCCTCTTTTTCCTCTT10819973CTTCGTCTCCTCTCCCTCCTCTCGCTTGGCTATATCTACCTCTACCTCTA
Coleophora deauratella genome assembly, chromosome: 27.
OY282415.1:530388-530407
CCAGTTATCCTGGCCCAGGAGCAGCAGCGG530388CTTCGTCTCCTCTCCCTCCTTGCGATCCTCACTGCAATCCATGGTGTCAC
Bimastos eiseni genome assembly, chromosome: 1.
OY365806.1:33689153-33689172
ATCGTTCTCCTCAACTTCCTTCTCTTCTTC33689153CTTCGTCTCCTCTCCCTCCTCCTTTTTCTTCCTCCTCTTCCTCCTCCTCC
Drosophila limbata genome assembly, chromosome: 4.
OZ001355.1:11966267-11966286
CCACACTGCCACGCCCAGCTGTCAGTCAAT11966267CTTCGTCTCCTCTCCCTCCTCTCTATCAGCAACAGTTGTCTTTCTACTTA
Rattus norvegicus BAC CH230-264O7 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence.
AC110462.5:121125-121144
AAGGATGCGTGTGAAGCTGTACCATCCTGG121125AGGAGGGAGAGGAGACGAAGGCAGGGTAGGTGCTAAGCAGGATGTACCCA
Mus musculus castaneus genome assembly, chromosome: 6.
OW971840.1:24447151-24447170
CACTCATAGAGGCAAAGGGGAGGGGGGATG24447151AGGAGGGAGAGGAGACGAAGGGTTTGTGGAGGGTTTAACCGGGAAGATGG
Peromyscus eremicus genome assembly, chromosome: 2.
OX460395.1:148449267-148449286
GTCCCTTTCATTTCTGTGAGGAAGAGGGGG148449267AGGAGGGAGAGGAGACGAAGAAGAGATGAGGGGAGGAGGGGAGGGAGAGT
Peromyscus eremicus genome assembly, chromosome: 2.
OX460467.1:148910927-148910946
GTCCCTTTCATTTCTGTGAGGAAGAGGGGG148910927AGGAGGGAGAGGAGACGAAGAAGAGATGAGGGGAGGAGGGGAGGGAGAGT
Orcinus orca genome assembly, chromosome: 9.
OW443369.1:43086015-43086034
TTTCCCTCAAGTAGATGGAAATGAAATGGG43086015AGGAGGGAGAGGAGACGAAGTCAAGCCTGAACACCATCTATTACAGATCA
Lagenorhynchus albirostris genome assembly, chromosome: 8.
OX459080.1:42968765-42968784
TTTCCCTCAAGTAGATGGAAATGAAATGGG42968765AGGAGGGAGAGGAGACGAAGTCAAGCCTGAACACCATCTATCACAGATCA
Globicephala melas genome assembly, chromosome: 9.
OY734048.1:42880594-42880613
TTTCCCTCAAGTAGGTGGAAATGAAATGGG42880594AGGAGGGAGAGGAGACGAAGTCAAGCCTGAACACCATCTATTACAGATCA
Xyrichtys novacula genome assembly, chromosome: 18.
OY660881.1:22178435-22178454
ACAGAATAATACAGTAAGGCCTTGAGGAGC22178435AGGAGGGAGAGGAGACGAAGGTGGTCCTCCTATAGGCCTGCAGGCTCAGT
TSA: Pyrus x bretschneideri Unigene13810_XinShao mRNA sequence.
JR608741.1:1446-1465
CTCCATAAAAGGCAGGAGCCTCTGAGTTCC1446AGGAGGGAGAGGAGACGAAGAAGAACCCTGTGCATGGTCCCCAGTATTTA
PP_LBa0025-I15.R PP_LBa Prunus persica genomic 3', genomic survey sequence.
FI975352.1:135-154
CTCCATAAAAGGCAGGAGTCTCTGGGTTCC135AGGAGGGAGAGGAGACGAAGAAGAAGAACCCTGTACATGGTCCCCAATAT
Rattus norvegicus chromosome 1 clone RP32-590H16 map q34, *** SEQUENCING IN PROGRESS ***, 7 ordered pieces.
AC121354.2:82053-82072
AAGGATGCGTGTGAAGCTGTACCATCCTGG82053AGGAGGGAGAGGAGACGAAGGCAGGGTAGGTGCTAAGCAGGATGTACCCA
Haematococcus lacustris strain UTEX 2505 chloroplast, complete genome.
MG677935.1:146445-146464
CGGAGCCGTACCGGACCGGAGCCGTAGGGT146445AGGAGGGAGAGGAGACGAAGTGGTAGAGGGAACCGGAGCCGTAGGGTAGG
Malus x robusta genome assembly, chromosome: 5.
OY720329.1:38498707-38498726
CTCCATAAAAGGCAGGAGTCTCTGGGTTCC38498707AGGAGGGAGAGGAGACGAAGAAGAACCCTGTGCATGGTCCCCAGTATTTA
Crataegus laevigata genome assembly, chromosome: 6.
OY756943.1:38358532-38358551
CTCCATAAAAGGCAGGAGTCTCTGGGTTCC38358532AGGAGGGAGAGGAGACGAAGAAGAAGAACCCTGTGCATGGTCCCCAGTAT
Pyrus communis genome assembly, chromosome: 8.
OY757075.1:25560553-25560572
CTCCATAAAAGGCAGGAGTCTCTGGGTTCC25560553AGGAGGGAGAGGAGACGAAGAAGAACCCTGTGCATGGTCCCCAGTATTTA
Spirometra erinaceieuropaei genome assembly, scaffold: SPER_scaffold0129817.
LN141846.1:2179-2198
AATTATATTAGCATTAGAATCGGGTACAGA2179AGGAGGGAGAGGAGACGAAGAAAACTACACCTTTATTTCTACCACTGATA
Notodromas monacha.
OA884139.1:29473-29492
GGCACGACAAAGAGGGGGAGGAGGAGGAGG29473AGGAGGGAGAGGAGACGAAGAAAAGCTCGCCTCGCCTCGCCAACGAACCT
Sthenelais limicola genome assembly, chromosome: 4.
OW804097.1:61523206-61523225
TATGGGGAAGGGGGCAGAGGTGGAGGGGGC61523206AGGAGGGAGAGGAGACGAAGGAAGAGAGGAACACGAGGCATGGGATAGGT
Lasius fuliginosus genome assembly, chromosome: 13.
OX424455.1:5823452-5823471
GAGAAGACGGTTTAGGTTGAGACAAGGAGG5823452AGGAGGGAGAGGAGACGAAGGTATGCGACACGACAATGTGTGCGGACATA
Netelia virgata genome assembly, chromosome: 4.
OX637866.1:26096795-26096814
AATAAAGAAAGCAAGAGGTGGGAGGAAAGA26096795AGGAGGGAGAGGAGACGAAGCAATTGTGATAATAGAAATAGTGAAAGGAA
Coleophora deauratella genome assembly, chromosome: W.
OY282389.1:11826964-11826983
GTGACACCATGGATTGCAGTGAGGATCGCA11826964AGGAGGGAGAGGAGACGAAGCCGCTGCTGCTCCTGGGCCAGGATAACTGG
Thysanoteuthis rhombus genome assembly, chromosome: 1.
OY735198.1:36508352-36508371
TGAGTAATCCAGTCTGTGGCGGGATATAGT36508352AGGAGGGAGAGGAGACGAAGTTGGACTGCTCTGAAGAGAGCCTGGGATCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTCGTCTCCTCTCCCTCCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTCGTCTCCTCTCCCTCCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.744 | 0.735 | search_plus_done; http://172.18.8.135:50400/match?q=CTTCGTCTCCTCTCCCTCCT&k=0&no_gap=0&offset=0&limit=50
0.957 | 0.213 | search_minus_done; http://172.18.8.135:50400/match?q=AGGAGGGAGAGGAGACGAAG&k=0&no_gap=0&offset=0&limit=8
0.971 | 0.014 | cgi_end;

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