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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-06 15:11:45, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 5.
CP141914.1:6654589-6654608
GCTAATAATGTGATTATCACCAAGAACATC6654589CTTCTCAAAGGCCATTCTAATGTTTGCTTCTGTTACCTGGTTTTTCTTAT
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141931.1:6901209-6901228
GCGAATAATGTGATTATCACCAAGAACATC6901209CTTCTCAAAGGCCATTCTAATGTTTGCTTCTGTTACCTGGTTTTTCTTAT
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141957.1:6324965-6324984
GCTAATAATGTGATTATCACCAAGAACATC6324965CTTCTCAAAGGCCATTCTAATGTTTGCTTCTGTTACCTGGTTTTTCTTAT
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141974.1:6813979-6813998
GCTAATAATGTGATTATCACCAAGAACATC6813979CTTCTCAAAGGCCATTCTAATGTTTGCTTCTGTTACCTGGTTTTTCTTAT
Malus x robusta genome assembly, chromosome: 2.
OY720326.1:6612344-6612363
GCGAATAATGTGATTATCACCAAGAACATC6612344CTTCTCAAAGGCCATTCTAATGTTTGCTTCTGTTACCTGGTTTTTCTTAT
Viola odorata genome assembly, chromosome: 9.
OY829545.1:9002367-9002386
TCTAATTCCCTAATACAATTTGAAATTCCA9002367CTTCTCAAAGGCCATTCTAAACAGTAAAAACATACACTCTTCCTTCTTAA
Viola stagnina genome assembly, chromosome: 5.
OZ247930.1:1898191-1898210
TCTAATTCCCTAATACAATTTGAAATTCCA1898191CTTCTCAAAGGCCATTCTAAAGGCTTAATTGAAACAAATTATTTTCCCTT
Viola epipsila genome assembly, chromosome: 6.
OZ274345.1:1371579-1371598
TCTAATTCCCTAATACAATTTGAAATTCCA1371579CTTCTCAAAGGCCATTCTAAAGGATTAATTGAAACAAATCCTTTTCCCTT
Viola palustris genome assembly, chromosome: 18.
OZ285002.1:1272565-1272584
TCTAATTCCCTAATACAATTTGAAATTCCA1272565CTTCTCAAAGGCCATTCTAAAGGCTTAATTGAAACAAATCCTTTTCCCTT
Karpatiosorbus bristoliensis genome assembly, chromosome: 4C.
OZ287408.1:6083196-6083215
GCTAATAATGTGATTATCACCAAGAACATC6083196CTTCTCAAAGGCCATTCTAATGTTTGCTTCTGTTACCTGGTTTTTTTTAT
Karpatiosorbus bristoliensis genome assembly, chromosome: 4A.
OZ287447.1:6047144-6047163
GCTAATAATGTGATTATCACCAAGAACATC6047144CTTCTCAAAGGCCATTCTAATGTTTGCTTCTGTTACCTGGTTTTTTTTAT
Karpatiosorbus bristoliensis genome assembly, chromosome: 4B.
OZ287448.1:6406847-6406866
GCTAATAATGTGATTATCACCAAGAACATC6406847CTTCTCAAAGGCCATTCTAATGTTTGCTTCTGTTACCTGGTTTTTTTTAT
Stegodyphus dumicola isolate Sdum_Otavi_A_Nest chromosome 1.
CP160598.1:276346837-276346856
GCAGCGCACATTTTGTCACCTTTAATTAAG276346837CTTCTCAAAGGCCATTCTAACAAAAAGAAATCATTCCGTCCAACTAAGAA
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143362.1:39929809-39929828
ATAAGAAAAACCAGGTAACAGAAGCAAACA39929809TTAGAATGGCCTTTGAGAAGGATGTTCTTGGTGATAATCACATTATTCGC
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143379.1:36651417-36651436
ATAAGAAAAACCAGGTAACAGAAGCAAACA36651417TTAGAATGGCCTTTGAGAAGGATGTTCTTGGTGATAATCACATTATTAGC
Malus domestica cultivar Red Fuji chromosome 5.
CP147797.1:39363777-39363796
ATAAGAAAAACCAGGTAACAGAAGCAAACA39363777TTAGAATGGCCTTTGAGAAGGATGTTCTTGGTGATAATCACATTATTCGC
Malus domestica cultivar Red Fuji chromosome 5.
CP147822.1:40209392-40209411
ATAAGAAAAACCAGGTAACAGAAGCAAACA40209392TTAGAATGGCCTTTGAGAAGGATGTTCTTGGTGATAATCACATTATTCGC
Malus ioensis cultivar PI590015 chromosome 5.
CP154728.1:39592960-39592979
ATAAGAAAAACCAGGTAACAGAAGCAAACA39592960TTAGAATGGCCTTTGAGAAGGATGTTCTTCGTGATAATCACATTATTAGC
Malus ioensis cultivar PI590015 chromosome 5.
CP154745.1:40429540-40429559
ATAAGAAAAACCAGGTAACAGAAGCAAACA40429540TTAGAATGGCCTTTGAGAAGGATGTTCTTCGTGATAATCACATTATTAGC
Malus coronaria cultivar PI590014 chromosome 5.
CP154762.1:41270008-41270027
ATAAGAAAAACCAGGTAACAGAAGCAAACA41270008TTAGAATGGCCTTTGAGAAGGATGTTCTTCGTGATAATCACATTATTAGC
Malus coronaria cultivar PI590014 chromosome 5.
CP154779.1:40659553-40659572
ATAAGAAAAACCAGGTAACAGAAGCAAACA40659553TTAGAATGGCCTTTGAGAAGGATGTTCTTCGTGATAATCACATTATTAGC
Malus domestica cultivar WA 38 chromosome 5B.
CP165688.1:39174483-39174502
ATAAGAAAAACCAGGTAACAGAAGCAAACA39174483TTAGAATGGCCTTTGAGAAGGATGTTCTTGGTGATAATCACATTATTCGC
Malus domestica cultivar WA 38 chromosome 5A.
CP165705.1:39253330-39253349
ATAAGAAAAACCAGGTAACAGAAGCAAACA39253330TTAGAATGGCCTTTGAGAAGGATGTTCTTGGTGATAATCACATTATTCGC
Malus domestica cultivar Golden Delicious chromosome 05.
CP168769.1:38983774-38983793
ATAAGAAAAACCAGGTAACAGAAGCAAACA38983774TTAGAATGGCCTTTGAGAAGGATGTTCTTGGTGATAATCACATTATTCGC
Malus domestica cultivar Golden Delicious chromosome 05.
CP168786.1:40005531-40005550
ATAAGAAAAACCAGGTAACAGAAGCAAACA40005531TTAGAATGGCCTTTGAGAAGGATGTTCTTGGTGATAATCACATTATTCGC
Malus sylvestris genome assembly, chromosome: 5.
OU696507.1:40227728-40227747
ATAAGAAAAACCAGGTAACAGAAGCAAACA40227728TTAGAATGGCCTTTGAGAAGGATGTTCTTGGTGATAATCACATTATTCGC
Malus domestica genome assembly, chromosome: 5.
OU696681.1:39518923-39518942
ATAAGAAAAACCAGGTAACAGAAGCAAACA39518923TTAGAATGGCCTTTGAGAAGGATGTTCTTGGTGATAATCACATTATTCGC
Malus domestica genome assembly, chromosome: 5.
OU744546.1:39077482-39077501
ATAAGAAAAACCAGGTAACAGAAGCAAACA39077482TTAGAATGGCCTTTGAGAAGGATGTTCTTGGTGATAATCACATTATTCGC
Malus domestica genome assembly, chromosome: 5.
OU744957.1:39538976-39538995
ATAAGAAAAACCAGGTAACAGAAGCAAACA39538976TTAGAATGGCCTTTGAGAAGGATGTTCTTGGTGATAATCACATTATTCGC
Malus domestica genome assembly, chromosome: 5.
OU744995.1:40378548-40378567
ATAAGAAAAACCAGGTAACAGAAGCAAACA40378548TTAGAATGGCCTTTGAGAAGGATGTTCTTGGTGATAATCACATTATTCGC
Viola odorata genome assembly, chromosome: 5.
OY829541.1:68929152-68929171
AAGGGAAAATGATTTGTTTCAATTAAGCCT68929152TTAGAATGGCCTTTGAGAAGTGGAATTTCAAATTGTATTAGGGAATTAGA
Viola epipsila genome assembly, chromosome: 6.
OZ274288.1:86753691-86753710
AAGGGAAAAGGATTTGTTTCAATTAATCCT86753691TTAGAATGGCCTTTGAGAAGTGGAATTTCAAATTGTATTAGGGAATTAGA
Viola suecica genome assembly, chromosome: 6.
OZ274301.1:87001750-87001769
AAGGGAAAAGGATTTGTTTCAATTAATCCT87001750TTAGAATGGCCTTTGAGAAGTGGAATTTCAAATTGTATTAGGGAATTAGA
Viola suecica genome assembly, chromosome: 6.
OZ274323.1:86794178-86794197
AAGGGAAAAGGATTTGTTTCAATTAATCCT86794178TTAGAATGGCCTTTGAGAAGTGGAATTTCAAATTGTATTAGGGAATTAGA
Viola palustris genome assembly, chromosome: 4.
OZ284988.1:89046281-89046300
AAGGGAAAAGGATTTGTTTCAATTAATCCT89046281TTAGAATGGCCTTTGAGAAGTGGAATTTCAAATTGTATTAGGGAATTAGA
Micromussa lordhowensis genome assembly, chromosome: 6.
OZ026600.1:351269-351288
CAAAACTTTGGAATGATTTACCTTCAGATA351269TTAGAATGGCCTTTGAGAAGGTGGAAAGAACTAGAACGAGGAGAAGCGAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTCTCAAAGGCCATTCTAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTCTCAAAGGCCATTCTAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.451 | 0.443 | search_plus_done; http://172.18.8.135:50900/match?q=CTTCTCAAAGGCCATTCTAA&k=0&no_gap=0&offset=0&limit=50
0.804 | 0.353 | search_minus_done; http://172.18.8.135:50900/match?q=TTAGAATGGCCTTTGAGAAG&k=0&no_gap=0&offset=0&limit=37
0.821 | 0.016 | cgi_end;

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