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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-03-20 06:06:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sciurus carolinensis genome assembly, chromosome: 3.
LR738592.1:55932139-55932156
ACCTGCCAACTGCACCTCCTGAGTCCCCAC55932139CTTCTGCTGGAGGATGCCCCAAGTAGTGGTGGAAGTAGCAGCAGCAGC
Onychomys leucogaster genome assembly, chromosome: 15.
OX460385.1:72211495-72211512
CAGGTGCAGGAGTCAGGTGTGACTGTGCCC72211495CTTCTGCTGGAGGATGCCTAAGACACAAGGTAGAGGAACAGTGGAGCT
Balaenoptera acutorostrata genome assembly, chromosome: X.
OX465355.1:4959363-4959380
TCTTCCCCCAGGTCTCCTGGCAGCTCCTCA4959363CTTCTGCTGGAGGATGCCCCAGCTTGTCTGAACTGAGTCACTGGGCCG
Rhinatrema bivittatum genome assembly, chromosome: 8.
LR584394.1:2027388-2027405
AAATGTTAAATAAATAAATAAAATAAATAT2027388CTTCTGCTGGAGGATGCCTTGGATCTTTTAAAGTTATCTAGGGTAGAT
Scyliorhinus canicula genome assembly, chromosome: 3.
LR744032.1:143282846-143282863
TGATGGCCCAAAGTGTGCCCAAAAAGGAGG143282846CTTCTGCTGGAGGATGCCAGAGCTTATCTGACAGTCTTCCCATGAGGC
Silurus aristotelis genome assembly, chromosome: 9.
OX327761.1:4491299-4491316
CTGAATGTTAGACACATGGGGCTTGTTCAC4491299CTTCTGCTGGAGGATGCCCCAAAGGTGCTCAATAGAGTTCAGGTCTGG
Zootoca vivipara genome assembly, chromosome: 8.
OY735909.1:52630281-52630298
GCTGTTCCTTCCGAGACCCCTGGCTGTACA52630281CTTCTGCTGGAGGATGCCATATGCTCTGTGTCCTGCACTAGCCTGCTG
Chroicocephalus ridibundus genome assembly, chromosome: 2.
OZ001734.1:72317515-72317532
CTTTGCTCTCCCTCGAATATGGTGCTTTCT72317515CTTCTGCTGGAGGATGCCTTCAGTGTAAGGTCAAGCCCACATCTTATC
Labrus bergylta genome assembly, chromosome: 9.
OZ005717.1:10381710-10381727
CTGCGCTTTAGGGTCCAAGATAGCTGTTGT10381710CTTCTGCTGGAGGATGCCTGAGAGAAAACACAGTCGTGTGCCAGTGAC
Medicago truncatula EST MtBB03H12F1 : T3 end of clone MtBB03H12 of cDNA library MtBB from symbiotic root nodules of cultivar Jemalong of Medicago truncatula (barrel medic).
AL373978.1:261-278
GTATTTTCATGCTTTAGAAATGGATGTTAT261CTTCTGCTGGAGGATGCCTATGCGTCGGTGATTCCTTTCGTGGTGGCT
Medicago truncatula EST MtBB03H12R1 : T7 end of clone MtBB03H12 of cDNA library MtBB from symbiotic root nodules of cultivar Jemalong of Medicago truncatula (barrel medic).
AL373979.1:248-265
GTATTTTCATGCTTTAGAAATGGATGTTAT248CTTCTGCTGGAGGATGCCTATGCGTCGGTGATTCCTTTCGTGGTGGCT
Mus musculus fertilized egg cDNA 3'-end sequence, clone: J0223B08.
C86269.1:461-478
GGNACATGTTGTCATGCTCTGGTGCTGCTG461CTTCTGCTGGAGGATGCCAGTGGNTNAGAAGTCTCANCAGGGTTTCGG
Cenchrus purpureus cultivar elephant grass chromosome A1.
CP053454.1:158069530-158069547
TCATGAGTTTCTGAAATTTGTCGTTACATT158069530CTTCTGCTGGAGGATGCCACTGCTTTACTGAACCTTGCTGCCTGATTA
Cenchrus americanus genome assembly, chromosome: PMC23DB1.
OX387239.1:178251414-178251431
TCACGAGTTTCTGAAATTTGTCGTTACATT178251414CTTCTGCTGGAGGATGCCACTGCTTTACTGAACCTTGCCACCTGATTA
Cenchrus americanus genome assembly, chromosome: PMC23DB7.
OX387245.1:39432557-39432574
CCGGGATGGCCGGATCCCCTCGCGCTGCCC39432557CTTCTGCTGGAGGATGCCCGCCGTCGGGGGAGGACGCCGCCATGGGCA
Cenchrus americanus genome assembly, chromosome: Pg7.
OZ001403.1:42497427-42497444
CCGGGATGGCCGGATCCCCTCGCGCTGCCC42497427CTTCTGCTGGAGGATGCCCGCCGTCGGGGGAGGACGCCGCCATGGGCA
Akkermansia biwaensis WON2089 DNA, complete genome.
AP025943.1:1507066-1507083
GGGATTGCCGCTGTACATGGCCTGCTGGAG1507066CTTCTGCTGGAGGATGCCGTACACTTCCCGTTCCACGACGGCTTCCGG
Akkermansia massiliensis strain EB-AMDK-40 chromosome, complete genome.
CP029701.1:1515904-1515921
GGCGTTCCCGCTGTACATGGCCTGCTGCAT1515904CTTCTGCTGGAGGATGCCGTACACTTCGCGTTCCACGACGGCTTCCGG
Akkermansia muciniphila strain EB-AMDK-41 chromosome, complete genome.
CP029702.1:1515912-1515929
GGCGTTCCCGCTGTACATGGCCTGCTGCAT1515912CTTCTGCTGGAGGATGCCGTACACTTCGCGTTCCACGACGGCTTCCGG
Akkermansia massiliensis strain EB-AMDK-39 chromosome, complete genome.
CP029753.1:1515956-1515973
GGCGTTCCCGCTGTACATGGCCTGCTGCAT1515956CTTCTGCTGGAGGATGCCGTACACTTCGCGTTCCACGACGGCTTCCGG
Cereibacter sphaeroides strain AB25 chromosome 1.
CP033442.1:76936-76953
GCCGCGGTACTGCTCGCGGTAGAAGTCGGC76936CTTCTGCTGGAGGATGCCCAGACGCAGCTCGTAGTCGGTGGGATGCAG
Cereibacter sphaeroides strain AB27 chromosome 1.
CP033446.1:76842-76859
GCCGCGGTATTGCTCGCGGTAGAAGTCGGC76842CTTCTGCTGGAGGATGCCCAGACGCAGCTCGTAGTCGGTGGGATGCAG
Cereibacter sphaeroides strain AB29 chromosome 1.
CP033450.1:76772-76789
GCCGCGGTATTGCTCGCGGTAGAAGTCGGC76772CTTCTGCTGGAGGATGCCCAGACGCAGCTCGTAGTCGGTGGGATGCAG
Cereibacter sphaeroides strain CH10 chromosome 1, complete sequence.
CP051468.1:2901122-2901139
GCCGCGGTACTGCTCGCGGTAGAAGTCGGC2901122CTTCTGCTGGAGGATGCCCAGACGCAGCTCGTAGTCGGTGGGATGCAG
Akkermansia muciniphila strain Akk2750 chromosome, complete genome.
CP072018.1:1498262-1498279
GGGATTGCCGCTGTACATGGCCTGCTGGAG1498262CTTCTGCTGGAGGATGCCGTACACTTCCCGTTCCACGACGGCTTCCGG
Akkermansia massiliensis strain Akk2680 chromosome, complete genome.
CP072019.1:1464003-1464020
GGCGTTCCCGCTGTACATGGCCTGCTGCAT1464003CTTCTGCTGGAGGATGCCGTACACTTCGCGTTCCACGACGGCTTCCGG
Akkermansia massiliensis strain Akk2196 chromosome, complete genome.
CP072021.1:1464135-1464152
GGCGTTCCCGCTGTACATGGCCTGCTGCAT1464135CTTCTGCTGGAGGATGCCGTACACTTCGCGTTCCACGACGGCTTCCGG
Akkermansia massiliensis strain Akk2190 chromosome, complete genome.
CP072022.1:1464158-1464175
GGCGTTCCCGCTGTACATGGCCTGCTGCAT1464158CTTCTGCTGGAGGATGCCGTACACTTCGCGTTCCACGACGGCTTCCGG
Akkermansia massiliensis strain Akk2000 chromosome, complete genome.
CP072025.1:1464152-1464169
GGCGTTCCCGCTGTACATGGCCTGCTGCAT1464152CTTCTGCTGGAGGATGCCGTACACTTCGCGTTCCACGACGGCTTCCGG
Akkermansia massiliensis strain Akk1573 chromosome, complete genome.
CP072036.1:1448971-1448988
GGCGTTCCCGCTGTACATGGCCTGCTGCAT1448971CTTCTGCTGGAGGATGCCGTACACTTCGCGTTCCACGACGGCTTCCGG
Akkermansia massiliensis strain Akk1476 chromosome, complete genome.
CP072038.1:1464129-1464146
GGCGTTCCCGCTGTACATGGCCTGCTGCAT1464129CTTCTGCTGGAGGATGCCGTACACTTCGCGTTCCACGACGGCTTCCGG
Akkermansia massiliensis strain Akk0580 chromosome, complete genome.
CP072044.1:1464079-1464096
GGCGTTCCCGCTGTACATGGCCTGCTGCAT1464079CTTCTGCTGGAGGATGCCGTACACTTCGCGTTCCACGACGGCTTCCGG
Candidatus Akkermansia timonensis isolate Akk0496b chromosome, complete genome.
CP072047.1:1498057-1498074
GGGATTGCCGCTGTACATGGCCTGCTGGAG1498057CTTCTGCTGGAGGATGCCGTACACTTCCCGTTCCACGACGGCTTCCGG
Candidatus Akkermansia timonensis isolate Akk0496a chromosome, complete genome.
CP072048.1:1498261-1498278
GGGATTGCCGCTGTACATGGCCTGCTGGAG1498261CTTCTGCTGGAGGATGCCGTACACTTCCCGTTCCACGACGGCTTCCGG
Candidatus Akkermansia timonensis isolate Akk0196 chromosome, complete genome.
CP072051.1:1545520-1545537
GGGATTGCCGCTGTACATGGCCTGCTGGAG1545520CTTCTGCTGGAGGATGCCGTACACTTCCCGTTCCACGACGGCTTCCGG
Mycoavidus sp. HKI chromosome, complete genome.
CP076444.2:1129126-1129143
ACTGGCGCGGCGTGCTCTGAGCTGCTCAGC1129126CTTCTGCTGGAGGATGCCGGCACTACGTTCGGGCCCATTGCATTTGCC
Paenibacillus macerans strain I6 chromosome, complete genome.
CP086393.1:3782723-3782740
TCCTACCGCCGAGTGTATCATCCGCTGAAG3782723CTTCTGCTGGAGGATGCCTTCGAGCAGGTTCGGGCCGGAAACTTCAAG
Mycoavidus sp. SF9855 chromosome, complete genome.
CP102085.1:1158606-1158623
ACTGGCGCGGCGTGCTCTGAGCTGCTCAGC1158606CTTCTGCTGGAGGATGCCGGCACTACGTTCGTGCCCATTGCATTTGCC
Streptomyces sp. NBC_00046 plasmid unnamed1, complete sequence.
CP108269.1:683077-683094
CGGACGGGGCCTGTGCCTGGTGCCCTCGCG683077CTTCTGCTGGAGGATGCCGGTGGCCCTGGCCGACCCGGCCCTGCCGCA
Streptomyces sp. NBC_00826 chromosome, complete genome.
CP108873.1:9470851-9470868
CGGACGAGGCCTGTGCCTGGTGCCCTCGCG9470851CTTCTGCTGGAGGATGCCGGTGGCCCTGGCCGACCCGGCCCTGCCGCA
Streptomyces sp. NBC_00826 plasmid unnamed1, complete sequence.
CP108874.1:521775-521792
CGGACGAGGCCTGTGCCTGGTGCCCTCGCG521775CTTCTGCTGGAGGATGCCGGTGGCCCTGGCCGACCCGGCCCTGCCGCA
Streptomyces sp. NBC_01590 plasmid unnamed1, complete sequence.
CP109331.1:779350-779367
CGGACGGGGCCTGTGCCTGGTGCCCTCGCG779350CTTCTGCTGGAGGATGCCGGTGGCCCTGGCCGACCCGGCCCTGCCGCA
Streptomyces sp. NBC_01369 chromosome, complete genome.
CP109575.1:9239337-9239354
CGGACGAGGCCTGTGCCTGGTGCCCTCGCG9239337CTTCTGCTGGAGGATGCCGGTGGCCCTGGCCGACCCGGCCCTGCCGCA
Streptomyces sp. NBC_01362 chromosome, complete genome.
CP109586.1:9239004-9239021
CGGACGAGGCCTGTGCCTGGTGCCCTCGCG9239004CTTCTGCTGGAGGATGCCGGTGGCCCTGGCCGACCCGGCCCTGCCGCA
Akkermansia sp. AE01SA01 chromosome, complete genome.
CP143890.1:293015-293032
GGGATTTCCGCTGTACATGGCCTGCTGGAG293015CTTCTGCTGGAGGATGCCGTACACTTCCCGTTCCACGACGGCTTCCGG
Lepidonotus clava genome assembly, chromosome: 4.
OW387136.1:26150973-26150990
CCTGTAAAGGGCCTGTGGGGCTGCAAAGGC26150973CTTCTGCTGGAGGATGCCGCCACATGCATGCACATCTGTGAGTGCCGC
Brachypalpus laphriformis genome assembly, chromosome: 2.
OX246754.1:14808817-14808834
GAGGTACGGTGCGAATTCGGAAATTTGTTG14808817CTTCTGCTGGAGGATGCCGATGTTGATGTTAGCTAGCTTGCCTAAATT
Agrilus cyanescens genome assembly, chromosome: 8.
OX376712.1:18034047-18034064
CTGGAGGTGGCAGATAATGAAGTGTACAGT18034047CTTCTGCTGGAGGATGCCACTAAGAGCGAACCGGATCTGCTGGCCGAA
Alentia gelatinosa genome assembly, chromosome: 2.
OX465580.1:65808741-65808758
CCTGTAAAGGGGCTCTAGGGCTGCAAAGGC65808741CTTCTGCTGGAGGATGCCGCCACATGCATGGACATCTGTGAGTGCCGC
Scyliorhinus canicula genome assembly, chromosome: 18.
LR744047.1:126818904-126818921
AATCCAAACTGATGGCGACTGAAGGAACGT126818904GGCATCCTCCAGCAGAAGAGAAGAGAGGAGGTGCCAGCCCATGAATCC
Sequence 39708 from patent US 11078247.
MY257099.1:4489-4506
TCCCTCTCCTACGTCGCCAACCAGGAGCCC4489GGCATCCTCCAGCAGAAGAACGCCGTCCAGATCATCTCCTCCGCCCTC
MAG: Candidatus Bathyarchaeota archaeon isolate bin28 chromosome.
CP070759.1:1535153-1535170
ATGGGAGACAGAGTTGCCATTCTGAACGAG1535153GGCATCCTCCAGCAGAAGGGCTCTCCAGACGATATATATTTTCATCCA
Medicago truncatula EST MtBB02B02F1 : T3 end of clone MtBB02B02 of cDNA library MtBB from symbiotic root nodules of cultivar Jemalong of Medicago truncatula (barrel medic).
AL373662.1:293-310
AGCCACCACGAAAGGAATCACCGACGCATA293GGCATCCTCCAGCAGAAGATAACATCCATTTCTAAAGCATGAAAATAC
TSA: Medicago truncatula Contig12659.Metrroot mRNA sequence.
JR368113.1:326-343
AGCCACCACGAAAGGAATCACCGACGCATA326GGCATCCTCCAGCAGAAGATAACATCCATTTCTAAAGCATGAAAATAC
Medicago truncatula clone mth2-75d20, WORKING DRAFT SEQUENCE, 16 unordered pieces.
AC234024.5:35805-35822
AGCCACCACGAAAGGAATCACCGACGCATA35805GGCATCCTCCAGCAGAAGATAACATCCATTTCTAAAGCATGAAAATAC
Peltaster fructicola strain LNHT1506 chromosome 1.
CP051139.1:3863853-3863870
TGCTGACCCAATGTAGCAGCCAAAGGCCAA3863853GGCATCCTCCAGCAGAAGTTCTGCAAATAAGCCGACGACCGACGACGG
Cenchrus americanus genome assembly, chromosome: PMC23DB1.
OX387239.1:95395390-95395407
TAATCAGGTGGCAAGGTTCAGTAAAGCAGT95395390GGCATCCTCCAGCAGAAGAATGTAACGACAAATTTCAGAAACTCGTGA
Vicia faba genome assembly, chromosome: 1S.
OX451735.1:1309662132-1309662149
TCACTCTCAAGCTTTTTGTGTGAGAACAAT1309662132GGCATCCTCCAGCAGAAGATGTAGCTGAAAGTTCTGAGAAGCTTCCTC
Medicago lupulina genome assembly, chromosome: 6.
OY283144.1:63085255-63085272
AGCCGCCACGCAAGGAACCACCGACGCATA63085255GGCATCCTCCAGCAGAAGATAACATCCATTTCTAAAGCATGAAAATAC
M.truncatula ENOD12 gene.
X68032.1:603-620
AGCCACCACGAAAGGAATCACCGACGCATA603GGCATCCTCCAGCAGAAGATAACATCCATTTCTAAAGCATGAAAATAC
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence.
CP000143.2:3111548-3111565
CTGCATCCCACCGACTACGAGCTGCGTCTG3111548GGCATCCTCCAGCAGAAGGCCGACTTCTACCGCGAGCAGTACCGCGGC
Cereibacter sphaeroides 2.4.1 chromosome 1, complete sequence.
CP030271.1:3111554-3111571
CTGCATCCCACCGACTACGAGCTGCGTCTG3111554GGCATCCTCCAGCAGAAGGCCGACTTCTACCGCGAGCAGTACCGCGGC
Akkermansia massiliensis strain AkkB40 chromosome, complete genome.
CP072017.1:1079756-1079773
CCGGAAGCCGTCGTGGAACGCGAAGTGTAC1079756GGCATCCTCCAGCAGAAGATGCAGCAGGCCATGTACAGCGGGAACGCC
Streptomyces sp. NBC_01005 chromosome, complete genome.
CP108703.1:431990-432007
TGCGGCAGGGCCGGGTCGGCCAGGGCCACC431990GGCATCCTCCAGCAGAAGCGCGAGGGCACCAGGCACAGGCCTCGTCCG
Macrobrachium nipponense isolate FS-2020 chromosome 34.
CP062047.1:31822534-31822551
CACGCCTGTCAACATCCTAGTAATCAGGGT31822534GGCATCCTCCAGCAGAAGAAAGTTTCCATGCAAACCATCATGACTCCC
Agrilus cyanescens genome assembly, chromosome: 1.
OX376705.1:13977423-13977440
TTCGGCCAGCAGATCCGGTTCGCTCTTAGT13977423GGCATCCTCCAGCAGAAGACTGTACACTTCATTATCTGCCACCTCCAG
Dioctria rufipes genome assembly, chromosome: 1.
OZ002740.1:59377125-59377142
AGCTTTGATGTCGCCCAACGCATTAGAGTT59377125GGCATCCTCCAGCAGAAGTGTTACAGACATTCTCTTAATATCATTGAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTCTGCTGGAGGATGCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTCTGCTGGAGGATGCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.385 | 0.376 | search_plus_done; http://172.18.8.135:50400/match?q=CTTCTGCTGGAGGATGCC&k=0&no_gap=0&offset=0&limit=50
0.608 | 0.223 | search_minus_done; http://172.18.8.135:50400/match?q=GGCATCCTCCAGCAGAAG&k=0&no_gap=0&offset=0&limit=1
0.620 | 0.011 | cgi_end;

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