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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:46:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

FLD1_54_D09.g1_A029 Root flooded Pinus taeda cDNA clone FLD1_54_D09_A029 5', mRNA sequence.
CO165453.1:712-731
AAACTAGGACGCTGTCACGAGTATATGGCA712CTTGAAATAGGAGCAGATAGGGAATCATGAGGAGACCAATAGCGCGCAAG
RTDS2_4_C06.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus taeda cDNA clone RTDS2_4_C06_A021 5', mRNA sequence.
CF394275.1:512-531
TCTTGTTTTTATTGATCTCCTCATGATTCC512CTATCTGCTCCTATTTCAAGTGCCATATATTCATGTGACAACGTCCTATT
HEAT1_21_F05.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone HEAT1_21_F05_A029 3', mRNA sequence.
DR013745.1:30-49
TTGCGCACTATTGGTCTCCTCATGATTCC30CTATCTGCTCCTATTTCAAGTGCCATATACTCGTGACAGCGTCCTAGTTT
EST1084773 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWAEF53 3' end, mRNA sequence.
DR694681.1:477-496
ATTCACTTCTGGTGGCCTCCGCACGATTCC477CTATCTGCTCCTATTTCAAGTGCTATATACTCATGTGACAGCGTCTTAGT
EST1153762 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMHK01 3' end, mRNA sequence.
DT638831.1:485-504
ATTCACTTCTGGTGGCCTCCGCACGATTCC485CTATCTGCTCCTATTTCAAGTGCTATATACTCATGTGACAGCGTCTTAGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTGAAATAGGAGCAGATAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTGAAATAGGAGCAGATAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.301 | 0.292 | search_plus_done; http://172.18.8.135:50400/match?q=CTTGAAATAGGAGCAGATAG&k=0&no_gap=0&offset=0&limit=50
0.588 | 0.287 | search_minus_done; http://172.18.8.135:50400/match?q=CTATCTGCTCCTATTTCAAG&k=0&no_gap=0&offset=0&limit=49
0.591 | 0.003 | cgi_end;

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