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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-08 05:06:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Lotus japonicus genomic DNA, clone: LjT36K06, TM1521.
AP010213.1:58109-58129
TTTCATAAAACTGAGTAGGAATTAGCCCTT58109CTTGAATGCAATTGATATCTGCCCCACTGTCGATTAGGGCTACTATATTGA
Lotus japonicus genomic DNA, chromosome 1, clone: LjT45F11, TM0122.
AP004949.1:7254-7274
TTTCATAAAACTGAGTAGGAATTAGCCCTT7254CTTGAATGCAATTGATATCTGCGCCACTGTCGATTAGGGCTACTATATATA
Lotus japonicus genomic DNA, chromosome 4, clone: LjT18E13, TM0283.
AP006401.1:5270-5290
TTTCATAAAACTGAGTAGGGATTAACCCTT5270CTTGAATGCAATTGATATCTGCGCCACTATCTATTAAGGCTACTATATTGA
Lotus japonicus genomic DNA, chromosome 4, clone: LjT32J05, TM0238.
AP009663.1:50979-50999
TTTCATAAAACTGAGTAGGAATTAATCCTT50979CTTGAATGCAATTGATATCTGCACCACTATCAATTAGGGCTACTATTTTGA
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:66766831-66766851
TTTCATAAAACTGAGTAGGAATTAGCCCTT66766831CTTGAATGCAATTGATATCTGCCCCACTGTCGATTAGGGCTACTATATTGA
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:51185867-51185887
TTTCATAAAACTGAGTAGGGATTAACCCTT51185867CTTGAATGCAATTGATATCTGCGCCACTATCAATTAGGGCTACTATATTGA
Lotus japonicus genomic DNA, chromosome 4, clone: LjT11L10, TM1734.
AP010347.1:63319-63339
TCAATATAGTAGCCCTAATTGATAGTGGCG63319CAGATATCAATTGCATTCAAGAAGGGTTAATCCCTACTCAGTTTTATGAAA
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:66646453-66646473
TCAATATAGTAGCCCTAATCGACAGTGGCG66646453CAGATATCAATTGCATTCAAGAAGGACTAATTCCTACTCAGTTTTATGAAA
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:133019678-133019698
TATATATAGTAGCCCTAATCGACAGTGGCG133019678CAGATATCAATTGCATTCAAGAAGGGCTAATTCCTACTCAGTTTTATGAAA
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:17142442-17142462
TCAATATAGTAGCCTTAATAGATAGTGGCG17142442CAGATATCAATTGCATTCAAGAAGGGTTAATCCCTACTCAGTTTTATGAAA
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:33727219-33727239
TCAATATAGTAGCCCTAATCGACAGTGGCG33727219CAGATATCAATTGCATTCAAGAAGGGCCAATTCCTACTCAGTTTTATGAAA
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:72687678-72687698
TCAAAATAGTAGCCCTAATTGATAGCGGTG72687678CAGATATCAATTGCATTCAAGAAGGATTAATTCCTACTCAGTTTTATGAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTGAATGCAATTGATATCTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTGAATGCAATTGATATCTG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.346 | 0.338 | search_plus_done; http://172.18.8.135:50400/match?q=CTTGAATGCAATTGATATCTG&k=0&no_gap=0&offset=0&limit=50
0.451 | 0.104 | search_minus_done; http://172.18.8.135:50400/match?q=CAGATATCAATTGCATTCAAG&k=0&no_gap=0&offset=0&limit=44
0.455 | 0.004 | cgi_end;

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