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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 12:11:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

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0149213 Brassica napus Etiolated seedlings (Uni-ZAP) Brassica napus cDNA, mRNA sequence.
EV170095.1:191-210
GACGAGAGTGTTCATGTCTTCTTTCCTAAG191CTTGACAGCGTTTAGCTTCTTCTCCCACTCCTCACGCGTGATCACTTTCT
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_15640.
FX706807.1:900-919
GACGAGAGTGTTCATGTCTTGTTTCCTAAG900CTTGACAGCGTTTAGCTTCTTCTCCCACTCCTCACGCGTGATCACTTTCT
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_6083.
FX746198.1:887-906
GACGAGAGTGTTCATGTCTTGTTTCCTAAG887CTTGACAGCGTTTAGCTTCTTCTCCCACTCTTCACGCGTGATCACTTTCT
odg08g12.g1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence.
BH969777.1:316-335
GACGAGAGTGTTCATATCTTCTTTCCTGAG316CTTGACAGCGTTTAGCTTCTTCTCCCACTCGTCACGTGTGATCACTTTCT
BOIET89TR BO_1.4_1.6_KB_nuc Brassica oleracea genomic clone BOIET89, genomic survey sequence.
CC968964.1:270-289
GACGAGAGTGTTCATGTCTTCTTTCCTAAG270CTTGACAGCGTTTAGCTTCTTCTCCCACTCTTCACGCGTGATCACTTTCT
Brassica napus cultivar Xiang5A chromosome 13.
CP123888.1:16982195-16982214
GACGAGAGTGTTCATGTCTTCTTTCCTAAG16982195CTTGACAGCGTTTAGCTTCTTCTCCCACTCTTCACGCGTGATCACTTTCT
BNDH5DCT_UP_013_B06_26JAN2004_046 Brassica napus BNDH5DCT Brassica napus cDNA 5', mRNA sequence.
CN727395.1:218-237
AGAAAGTGATCACGCGTGAGGAGTGGGAGA218AGAAGCTAAACGCTGTCAAGCTTAGGAAAGAAGACATGAACACTCTCGTC
38RDBRM_UP_031_C02_12JUL2004_012 Brassica rapa 38RDBRM Brassica rapa cDNA 5', mRNA sequence.
CX268136.1:256-275
AGAAAGTGATCACGCGTGAGGAGTGGGAGA256AGAAGCTAAACGCTGTCAAGCTTAGGAAACAAGACATGAACACTCTCGTC
39RDBRT_UP_045_D02_22JUL2004_010 Brassica rapa 39RDBRT Brassica rapa cDNA 5', mRNA sequence.
CX272802.1:213-232
AGAAAGTGGTCACGCGTGAGGAGTGGGAGA213AGAAGCTAAACGCTGTCAAGCTTAGGAAACAAGACATGAACACTCTCGTC
Brassica oleracea var. viridis mRNA, clone: KALE-008J20, 5' end sequence.
DK458847.1:263-282
AGAAAGTGATCACACGTGACGAGTGGGAGA263AGAAGCTAAACGCTGTCAAGCTCAGGAAAGAAGATATGAACACTCTCGTC
Brassica oleracea var. viridis mRNA, clone: KALE-017P09, 5' end sequence.
DK462416.1:263-282
AGAAAGTGATCACACGTGACGAGTGGGAGA263AGAAGCTAAACGCTGTCAAGCTCAGGAAAGAAGATATGAACACTCTCGTC
Brassica oleracea var. viridis mRNA, clone: KALE-019P16, 5' end sequence.
DK463189.1:263-282
AGAAAGTGATCACACGTGACGAGTGGGAGA263AGAAGCTAAACGCTGTCAAGCTCAGGAAAGAAGATATGAACACTCTCGTC
Brassica oleracea var. viridis mRNA, clone: KALE-106B14, 5' end sequence.
DK496129.1:242-261
AGAAAGTGATCACACGTGACGAGTGGGAGA242AGAAGCTAAACGCTGTCAAGCTCAGGAAAGAAGATATGAACACTCTCGTC
Brassica oleracea var. viridis mRNA, clone: KALE-139O17, 5' end sequence.
DK509059.1:239-258
AGAAAGTGATCACACGTGACGAGTGGGAGA239AGAAGCTAAACGCTGTCAAGCTCAGGAAAGAAGATATGAACACTCTCGTC
Brassica oleracea var. viridis mRNA, clone: KALE-152I13, 5' end sequence.
DK513871.1:242-261
AGAAAGTGATCACACGTGACGAGTGGGAGA242AGAAGCTAAACGCTGTCAAGCTCAGGAAAGAAGATATGAACACTCTCGTC
53COT5_T3_008_C01_19JUL2004_011 Brassica napus 36hr germinating seed library 53COT5 Brassica napus cDNA 5', mRNA sequence.
DY020612.1:222-241
AGAAAGTGATCACGCGTGAGGAGTGGGAGA222AGAAGCTAAACGCTGTCAAGCTTAGGAAAGAAGACATGAACACTCTCGTC
22FGYLU_UP_002_G05_01FEB2004_035 Brassica napus 22FGYLU Brassica napus cDNA 5', mRNA sequence.
DY028532.1:256-275
AGAAAGTGATCACGCGTGAGGAGTGGGAGA256AGAAGCTAAACGCTGTCAAGCTTAGGAAAGAAGACATGAACACTCTCGTC
32ETGS24_UP_018_B04_11FEB2005_030 Brassica napus 32ETGS24 Brassica napus cDNA 5', mRNA sequence.
EE426983.1:243-262
AGAAAGTGATCACACGTGACGAGTGGGAGA243AGAAGCTAAACGCTGTCAAGCTCAGGAAAGAAGATATGAACACTCTCGTC
37RDBRH_UP_032_B01_05JUL2004_013 Brassica rapa 37RDBRH Brassica rapa cDNA 5', mRNA sequence.
EE524683.1:256-275
AGAAAGTGATCACGCGTGAGGAGTGGGAGA256AGAAGCTAAACGCTGTCAAGCTTAGGAAACAAGACATGAACACTCTCGTC
BMSA01-T7-05-A07 Brassica napus Full-length cDNA Library Brassica napus cDNA, mRNA sequence.
EG020477.1:306-325
AGAAAGTGATCACGCGTGAAGAGTGGGAGA306AGAAGCTAAACGCTGTCAAGCTTAGGAAACAAGACATGAACACT
BNZB_UP_176_D09_11MAR2006_073 Brassica napus BNZB Brassica napus cDNA 5', mRNA sequence.
ES966760.1:229-248
AGAAAGTGATCACACGTGACGAGTGGGAGA229AGAAGCTAAACGCTGTCAAGCTCAGGAAAGAAGATATGAACACTCTCGTC
BNSCS3CT_UP_201_C11_13MAY2007_091 Brassica napus BNSCS3CT Brassica napus cDNA 5', mRNA sequence.
EV052746.1:256-275
AGAAAGTGATCACGCGTGAGGAGTGGGAGA256AGAAGCTAAACGCTGTCAAGCTTAGGAAAGAAGACATGAACACTCTCGTC
0178698 Brassica napus Leaf library Brassica napus cDNA, mRNA sequence.
EV099087.1:199-218
AGAAAGTGATCACACGTGACGAGTGGGAGA199AGAAGCTAAACGCTGTCAAGCTCAGGAAAGAAGATATGAACACTCTCGTC
0093016 Brassica napus Leaf library Brassica napus cDNA, mRNA sequence.
EV100693.1:194-213
AGAAAGTGATCACACGTGACGAGTGGGAGA194AGAAGCTAAACGCTGTCAAGCTCAGGAAAGAAGATATGAACACTCTCGTC
0110158 Brassica napus Senescent leaves Brassica napus cDNA, mRNA sequence.
EV104846.1:255-274
AGAAAGTGATCACGCGTGAGGAGTGGGAGA255AGAAGCTAAACGCTGTCAAGCTTAGGAAAGAAGACATGAACACTCTCGTC
0211439 Brassica napus Very early anther Brassica napus cDNA, mRNA sequence.
EV145505.1:266-285
AGAAAGTGATCACACGTGACGAGTGGGAGA266AGAAGCTAAACGCTGTCAAGCTCAGGAAAGAAGATATGAACACTCTCGTC
0149288 Brassica napus Etiolated seedlings (Uni-ZAP) Brassica napus cDNA, mRNA sequence.
EV170129.1:272-291
AGAAAGTGATCACGCGTGAGGAGTGGGAGA272AGAAGCTAAACGCTGTCAAGCTTAGGAAAGAAGACATGAACACTCTCGTC
BR026895 floral bud cDNA library KBFL Brassica rapa subsp. pekinensis cDNA clone KBFL-101D12 5', mRNA sequence.
EX042251.1:228-247
AGAAAGTGATCACGCGTGAGGAGTGGGAGA228AGAAGCTAAACGCTGTCAAGCTTAGGAAACAAGACATGAACACTCTCGTC
BR072217 flower cDNA library KFFB Brassica rapa subsp. pekinensis cDNA clone KFFB-005B10 5', mRNA sequence.
EX085927.1:255-274
AGAAAGTGATCACGCGTGAGGAGTGGGAGA255AGAAGCTAAACGCTGTCAAGCTTAGGAAACAAGACATGAACACTCTCGTC
BR075598 flower cDNA library KFFB Brassica rapa subsp. pekinensis cDNA clone KFFB-060B11 5', mRNA sequence.
EX089308.1:222-241
AGAAAGTGATCACGCGTGAGGAGTGGGAGA222AGAAGCTAAACGCTGTCAAGCTTAGGAAACAAGACATGAACACTCTCGTC
BR084343 infected leaf cDNA library KFPC Brassica rapa subsp. pekinensis cDNA clone KFPC-059D10 5', mRNA sequence.
EX098053.1:250-269
AGAAAGTGATCACGCGTGAGGAGTGGGAGA250AGAAGCTAAACGCTGTCAAGCTTAGGAAACAAGACATGAACACTCTCGTC
BR090911 seed and seedling cDNA library KFSD Brassica rapa subsp. pekinensis cDNA clone KFSD-035E12 5', mRNA sequence.
EX104621.1:261-280
AGAAAGTGATCACGCGTGAGGAGTGGGAGA261AGAAGCTAAACGCTGTCAAGCTTAGGAAACAAGACATGAACACTCTCGTC
BR096773 whole plant cDNA library KFYP Brassica rapa subsp. pekinensis cDNA clone KFYP-061H05 5', mRNA sequence.
EX110483.1:255-274
AGGAAGTGATCACGCGTGAGGAGTGGGAGA255AGAAGCTAAACGCTGTCAAGCTTAGGAAACAAGACATGAACACTCTCGTC
BR100514 whole plant cDNA library KFYP Brassica rapa subsp. pekinensis cDNA clone KFYP-113H05 5', mRNA sequence.
EX114224.1:255-274
AGAAAGTGATCACGCGTGAGGAGTGGGAGA255AGAAGCTAAACGCTGTCAAGCTTAGGAAACAAGACATGAACACTCTCGTC
BR106911 mature green leaf cDNA library KHLM Brassica rapa subsp. pekinensis cDNA clone KHLM-17C08 5', mRNA sequence.
EX123081.1:188-207
AGAAAGTGATCACGCGTGAGGAGTGGGAGA188AGAAGCTAAACGCTGTCAAGCTTAGGAAACAAGACATGAACACTCTCGTC
BR107502 mature green leaf cDNA library KHLM Brassica rapa subsp. pekinensis cDNA clone KHLM-26E04 5', mRNA sequence.
EX123672.1:188-207
AGAAAGTGATCACGCGTGAGGAGTGGGAGA188AGAAGCTAAACGCTGTCAAGCTTAGGAAACAAGACATGAACACTCTCGTC
BR107819 mature green leaf cDNA library KHLM Brassica rapa subsp. pekinensis cDNA clone KHLM-31C04 5', mRNA sequence.
EX123989.1:188-207
AGAAAGTGATCACGCGTGAGGAGTGGGAGA188AGAAGCTAAACGCTGTCAAGCTTAGGAAACAAGACATGAACACTCTCGTC
BR109911 etiolated mature leaf cDNA library KHLW Brassica rapa subsp. pekinensis cDNA clone KHLW-08G02 5', mRNA sequence.
EX126081.1:231-250
AGAAAGTGATCACGCGTGAGGAGTGGGAGA231AGAAGCTAAACGCTGTCAAGCTTAGGAAACAAGACATGAACACTCTCGTC
0239774 B. juncea infected with A. candida 2VRR Brassica juncea/Albugo candida mixed genomic library cDNA, mRNA sequence.
HO929480.1:268-287
AGAAAGTGATCACGCGTGAGGAGTGGGAGA268AGAAGCTAAACGCTGTCAAGCTTAGGAAACAAGACATGAACACTCTCGTC
Brassica napus cultivar Xiang5A chromosome 2.
CP123877.1:34184460-34184479
AGAAAGTGATCACGCGTGAAGAGTGGGAGA34184460AGAAGCTAAACGCTGTCAAGCTTAGGAAACAAGACATGAACACTCTCGTC
Brassica napus cultivar Xiang5A chromosome 6.
CP123881.1:32282113-32282132
AGAAAGTGATCACACGTGACGAGTGGGAGA32282113AGAAGCTAAACGCTGTCAAGCTCAGGAAAGAAGATATGAACACTCTCGTC
Brassica napus genome assembly, chromosome: A01.
HG994355.1:20872009-20872028
AGAAAGTGATCACGCGTGAGGAGTGGGAGA20872009AGAAGCTAAACGCTGTCAAGCTTAGGAAAGAAGACATGAACACTCTCGTC
Brassica napus genome assembly, chromosome: C01.
HG994365.1:33466142-33466161
AGAAAGTGATCACGCGTGAAGAGTGGGAGA33466142AGAAGCTAAACGCTGTCAAGCTTAGGAAAGAAGACATGAACACTCTCGTC
Brassica napus genome assembly, chromosome: C04.
HG994368.1:27007480-27007499
AGAAAGTGATCACACGTGACGAGTGGGAGA27007480AGAAGCTAAACGCTGTCAAGCTCAGGAAAGAAGATATGAACACTCTCGTC
Brassica rapa genome, scaffold: A01.
LR031571.1:26026172-26026191
AGAAAGTGATCACGCGTGAGGAGTGGGAGA26026172AGAAGCTAAACGCTGTCAAGCTTAGGAAACAAGACATGAACACTCTCGTC
Brassica oleracea HDEM genome, scaffold: C4.
LR031873.1:25758997-25759016
AGAAAGTGATCACACGTGACGAGTGGGAGA25758997AGAAGCTAAACGCTGTCAAGCTCAGGAAAGAAGATATGAACACTCTCGTC
Brassica oleracea HDEM genome, scaffold: C1.
LR031878.1:33243944-33243963
AGAAAGTGATCACGCGTGAAGAGTGGGAGA33243944AGAAGCTAAACGCTGTCAAGCTTAGGAAAGAAGACATGAACACTCTCGTC
Brassica rapa genome assembly, chromosome: A01.
LS974617.2:26546097-26546116
AGAAAGTGATCACGCGTGAGGAGTGGGAGA26546097AGAAGCTAAACGCTGTCAAGCTTAGGAAACAAGACATGAACACTCTCGTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTGACAGCGTTTAGCTTCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTGACAGCGTTTAGCTTCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.249 | 0.240 | search_plus_done; http://172.18.8.135:50400/match?q=CTTGACAGCGTTTAGCTTCT&k=0&no_gap=0&offset=0&limit=50
2.071 | 1.822 | search_minus_done; http://172.18.8.135:50400/match?q=AGAAGCTAAACGCTGTCAAG&k=0&no_gap=0&offset=0&limit=44
2.099 | 0.028 | cgi_end;

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