GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 13:00:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Heterocephalus glaber genome assembly, chromosome: 4.
OX090944.1:60811859-60811877
AGATAATAAAGAAAAGCTCTATAACATTGG60811859CTTGAGGAGTGATTTCCTAGATTTGACAATGAAAACAAGATTAAACAAA
Heterocephalus glaber genome assembly, chromosome: 5.
OZ001070.1:67907870-67907888
AGATAATAAAGAAAAGCTCTATAACATTGG67907870CTTGAGGAGTGATTTCCTAGATTTGACAATGAAAACAAGATTAAACAAA
Heterocephalus glaber genome assembly, chromosome: 5.
OZ001113.1:67916603-67916621
AGATAATAAAGAAAAGCTCTATAACATTGG67916603CTTGAGGAGTGATTTCCTAGATTTGACAATGAAAACAAGATTAAACAAA
PP_LBa0058-C01.F PP_LBa Prunus persica genomic 5', genomic survey sequence.
FI934261.1:574-592
ATCTTCAACAGTGAAGCATCTGCTGCAGCT574CTTGAGGAGTGATTTCCTACCAATCCCACTGCTTCTGTGATCTGCCTTG
Neoitamus cyanurus genome assembly, chromosome: 4.
OX384543.1:13113494-13113512
ATCATCGCATACAATGCAAGTATGTAAGTT13113494CTTGAGGAGTGATTTCCTATTTCTATGTATACTTACATACATTTCCCTA
Mimachlamys varia genome assembly, chromosome: 10.
OX392536.1:4126021-4126039
ATATTAGGATACCAACCATAGTAGCGGCTT4126021CTTGAGGAGTGATTTCCTATGTGTTTTTGTACAGAGTTTACTAATTTTG
Stenurella melanura genome assembly, chromosome: 10.
OY757318.1:37876134-37876152
TTTCTTGTTACAATTTTTAAACCCACGGAC37876134CTTGAGGAGTGATTTCCTAAGGGGTGGAAACACGTGACAATGCATACAA
Pongo pygmaeus genome assembly, chromosome: XII.
LT571452.1:43894129-43894147
CTTTGTTCAGGGCATTTTCACACGTTATTT43894129TAGGAAATCACTCCTCAAGAAGGATGGGCAAGAAAACAGGCCAGCTGCT
Heterocephalus glaber genome assembly, chromosome: 4.
OX090912.1:105829404-105829422
TTTGTTTAATCTTGTTTTCATTGTCAAATC105829404TAGGAAATCACTCCTCAAGCCAATGTTATAGAGCTTTTCTTTATTATCT
Pm_0907 Fruits and flowers of Prunus mume cv. Xiyeqing Prunus mume cDNA, mRNA sequence.
GW869481.1:268-286
AAGGCATATCACCAGAAGCAGTGGGATTGG268TAGGAAATCACTCCTCAAGAGCTGCAGCAGATGCTTCACTGCTGAAGAT
Prunus dulcis DNA, pseudomolecule Pd03.
AP019299.1:6867872-6867890
CAAGGCAGATCACAGAAGCAGTGGGATTGG6867872TAGGAAATCACTCCTCAAGAGCTGCAGCAGATGCTTCACTGTTGAAGAT
Prunus mume strain gojrou clone P13 SSR marker genomic sequence.
GU458014.1:229-247
CAAGGCAGATCACAGAAGCAGTGGGACCGG229TAGGAAATCACTCCTCAAG
Prunus mume strain gojrou clone P14 SSR marker genomic sequence.
GU458015.1:234-252
CAAGGCAGATCACAGAAGCAGTGGGACCGG234TAGGAAATCACTCCTCAAG
Prunus americana strain chibangzi clone A31 SSR marker genomic sequence.
GU458032.1:229-247
CAAGGCAGATCACAGAAGCAGTGGGATTGG229TAGGAAATCACTCCTCAAG
Prunus americana strain kuhehonglian clone A32 SSR marker genomic sequence.
GU458033.1:229-247
CAAGGCAGATCACAGAAGCAGTGGGATTGG229TAGGAAATCACTCCTCAAG
Prunus avium clone PruavNIP6 aquaporin mRNA, complete cds.
MG557891.1:117-135
CAAGGCAGATCACAGAAGCAGTGGGATTGG117TAGGAAATCACTCCTCAAGAGCTGCAGCAGATGCTTCACTGTTGAAGAT
Prunus cerasifera clone PrucxmNIP6 aquaporin mRNA, complete cds.
MG557899.1:117-135
CAAGGCAGATCACAGAAGCAGTGGGATTGG117TAGGAAATCACTCCTCAAGAGCTGCAGCAGATGCTTCACTGTTGAAGAC
Prunus avium NIP6;1 gene, complete cds.
MK896947.1:346-364
CAAGGCAGATCACAGAAGCAGTGGGATTGG346TAGGAAATCACTCCTCAAGAGCTGCAGCAGATGCTTCACTGTTGAAGAT
Euonymus europaeus genome assembly, chromosome: 4.
OY756960.1:26621320-26621338
AGGAGGAAATTTAAAAAACTGCTCTATCAA26621320TAGGAAATCACTCCTCAAGCAAACTTTTGGGGTTTCACGAAAAGAGGAT
Volucella inflata genome assembly, chromosome: 2.
OV743717.1:83417580-83417598
AAAAGCGCTTTATATGGCTCTTAACATTTT83417580TAGGAAATCACTCCTCAAGTGCCCAGGCCTCTAAAACTAGGAATTTAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTGAGGAGTGATTTCCTA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTGAGGAGTGATTTCCTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.187 | 0.178 | search_plus_done; http://172.18.8.135:50400/match?q=CTTGAGGAGTGATTTCCTA&k=0&no_gap=0&offset=0&limit=50
0.396 | 0.209 | search_minus_done; http://172.18.8.135:50400/match?q=TAGGAAATCACTCCTCAAG&k=0&no_gap=0&offset=0&limit=43
0.405 | 0.009 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).