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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 07:22:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus cDNA, clone:MF051c01_f, 3' end.
BP030966.1:344-363
AGACATCTTTGCTAAAGCTCGGCTAGCATC344CTTGCCGGCAAATAGAGCATAAGGTCCACCGGGTCCGTAAAACATCCTGC
Lotus japonicus cDNA, clone: LjFL3-012-DH08.r0, 3'-end sequence.
FS348940.1:631-650
AGACATCTTTGCTAAAGCTCGGCTAGCATC631CTTGCCGGCAAATAGAGCATAAGGTCCACCGGGTCCGTAAAACATCCTGC
Lotus japonicus cDNA, clone: LjFL3-053-AF11.r0, 3'-end sequence.
FS361847.1:631-650
AGACATCTTTGCTAAAGCTCGGCTAGCATC631CTTGCCGGCAAATAGAGCATAAGGTCCACCGGGTCCGTAAAACATCCTGC
Arachis hypogaea mRNA, clone: AHCG11C20, 5' end sequence.
FS963745.1:493-512
AGACATTTTTGCTAACGCTCTGCTAGCATC493CTTGCCGGCAAATAGAGCATATGGTCCACCAGGTCCATAAAACATCCTGC
LJGBB92TO JCVI-LJ1 Lotus japonicus cDNA 3', mRNA sequence.
GO017270.1:592-611
AGACATCTTTGCTAAAGCTCGGCTAGCATC592CTTGCCGGCAAATAGAGCATAAGGTCCACCGGGTCCGTAAAACATCCTGC
LJNAJ63TO JCVI-LJ3 Lotus japonicus cDNA 3', mRNA sequence.
GO039045.1:683-702
AGACATCTTTGCTAAAGCTCGGCTAGCACC683CTTGCCGGCAAATAGAGCATAAGGTCCACCGGGTCCGTAAGACATCCTGC
Arachis hypogaea EST, cultivar Minhua6, clone GAYHEI101D6BA8.
LN667849.1:120-139
AGACATTTTTGCTAACGCTCTGCTAGCATC120CTTGCCGGCAAATAGAGCATATGGTCCACCAGGTCCATAAAACATCCTAA
Arachis hypogaea EST, cultivar Minhua6, clone GAYHEI101DKWOG.
LN675078.1:287-306
ATACTCTGCGTTGATACCACTGCTAGCATC287CTTGCCGGCAAATAGAGCATATGGTCCACCAGGTCCATAAACATCCTGCT
Lupinus angustifolius cultivar Tanjil voucher WA chromosome LG-08.
CP023120.1:15309109-15309128
AGACATCTTTGCTAAAGCTCTGCTGGCATC15309109CTTGCCGGCAAATAGAGCATAAGGTCCACCAGGTCCATAAAACATCCTTG
Arachis hypogaea cultivar Shitouqi chromosome A05.
CP030987.1:111102862-111102881
AGACATTTTTGCTAACGCTCTGCTAGCATC111102862CTTGCCGGCAAATAGAGCATATGGTCCACCAGGTCCATAAAACATCCTAA
Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:150757679-150757698
AGACATTTTTGCTAACGCTCTGCTAGCATC150757679CTTGCCGGCAAATAGAGCATATGGTCCACCAGGTCCATAAAACATCCTAA
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:158325023-158325042
AGACATTTTTGCTAACGCTCTGCTAGCATC158325023CTTGCCGGCAAATAGAGCATATGGTCCACCAGGTCCATAAAACATCCTAA
Lotus japonicus cDNA: Ljfb-p96, 5' end, expressed in flower bud.
AU089332.1:383-402
GCAGGATGTTTTACGGACCCGGTGGACCTT383ATGCTCTATTTGCCGGCAAGGATGCTACCGAGCTTTAACAAAGATGTCTT
Lotus japonicus cDNA clone:MWL071d05_r, 5' end.
AV410373.1:336-355
GCAGGATGTTTTACGGACCCGGTGGACCTT336ATGCTCTATTTGCCGGCAAGGATGCTAGCCGAGCTTTAGCAAAGATGTCT
LjNEST40b7r Lotus japonicus nodule library 5 and 7 week-old Lotus japonicus cDNA 5', mRNA sequence.
BI419447.1:372-391
GCAGGATGTTTTACGGACCCGGTGGACCTT372ATGCTCTATTTGCCGGCAAGGATGCTAGCCGAGCTTTAGCAAAGATGTCT
TFR5_73_G09_E001.g1 USDA-Tifton Peanut Library TFR5 Arachis hypogaea cDNA clone TFR5-073_G09 5', mRNA sequence.
ES712220.1:92-111
GCAGGATGTTTTATGGACCTGGTGGACCAT92ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCT
C20R5_14_E09_E002.g1 USDA-Tifton Peanut Library C20R5 Arachis hypogaea cDNA clone C20R5-014-69_E09 5', mRNA sequence.
ES717542.1:295-314
GCAGGATGTTTTATGGACCTGGTGGACCAT295ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCT
C20L_95_B10_E002.g1 USDA-Tifton Peanut Library C20L Arachis hypogaea cDNA clone C20L-095_B10 5', mRNA sequence.
ES757385.1:376-395
GCAGGATGTTTTATGGACCTGGTGGACCAT376ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCT
Lotus japonicus cDNA, clone: LjFL3-012-DH08, 5'-end sequence.
FS322344.1:394-413
GCAGGATGTTTTACGGACCCGGTGGACCTT394ATGCTCTATTTGCCGGCAAGGATGCTAGCCGAGCTTTAGCAAAGATGTCT
Lotus japonicus cDNA, clone: LjFL3-053-AF11, 5'-end sequence.
FS335335.1:394-413
GCAGGATGTTTTACGGACCCGGTGGACCTT394ATGCTCTATTTGCCGGCAAGGATGCTAGCCGAGCTTTAGCAAAGATGTCT
Lotus japonicus cDNA, clone: LjFL3-077-BA04, 5'-end sequence.
FS343524.1:394-413
GCAGGATGTTTTACGGACCCGGTGGACCTT394ATGCTCTATTTGCCGGCAAGGATGCTAGCCGAGCTTTAGCAAAGATGTCT
Arachis hypogaea mRNA, clone: AHCG03G15, 5' end sequence.
FS961468.1:334-353
GCAGGATGTTTTATGGACCTGGTGGACCAT334ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCT
Arachis hypogaea mRNA, clone: AHCG06N14, 5' end sequence.
FS962467.1:366-385
GCAGGATGTTTTATGGACCTGGTGGACCAT366ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCT
Arachis hypogaea mRNA, clone: AHCL19L17, 5' end sequence.
FS972806.1:361-380
GCAGGATGTTTTATGGACCTGGTGGACCAT361ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCT
Arachis hypogaea mRNA, clone: AHCR06N16, 5' end sequence.
FS975173.1:344-363
GCAGGATGTTTTATGGACCTGGTGGACCAT344ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCT
Arachis hypogaea mRNA, clone: AHCR14I17, 5' end sequence.
FS977732.1:335-354
GCAGGATGTTTTATGGACCTGGTGGACCAT335ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCT
Arachis hypogaea mRNA, clone: AHCR18N10, 5' end sequence.
FS979168.1:364-383
GCAGGATGTTTTATGGACCTGGTGGACCAT364ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCT
LJGAP56TF JCVI-LJ1 Lotus japonicus cDNA 5', mRNA sequence.
GO005497.1:395-414
GCAGGATGTTTTACGGACCCGGTGGACCTT395ATGCTCTATTTGCCGGCAAGGATGCTAGCCGAGCTTTAGCAAAGATGTCT
LJGAS53TF JCVI-LJ1 Lotus japonicus cDNA 5', mRNA sequence.
GO006783.1:395-414
GCAGGATGTTTTACGGACCCGGTGGACCTT395ATGCTCTATTTGCCGGCAAGGATGCTAGCCGAGCTTTAGCAAAGATGTCT
LJGBB92TF JCVI-LJ1 Lotus japonicus cDNA 5', mRNA sequence.
GO009732.1:395-414
GCAGGATGTTTTACGGACCCGGTGGACCTT395ATGCTCTATTTGCCGGCAAGGATGCTAGCCGAGCTTTAGCAAAGATGTCT
LJGC758TF JCVI-LJ1 Lotus japonicus cDNA 5', mRNA sequence.
GO013208.1:283-302
GCAGGATGTTTTACGGACCCGGTGGACCTT283ATGCTCTATTTGCCGGCAAGGATGCTAGCCGAGCTTTAGCAAAGATGTCT
LJMC076TFB JCVI-LJ2 Lotus japonicus cDNA 5', mRNA sequence.
GO025319.1:395-414
GCAGGATGTTTTACGGACCCGGTGGACCTT395ATGCTCTATTTGCCGGCAAGGATGCTAGCCGAGCTTTAGCAAAGATGTCT
LJNAJ63TF JCVI-LJ3 Lotus japonicus cDNA 5', mRNA sequence.
GO032249.1:365-384
GCAGGATGTCTTACGGACCCGGTGGACCTT365ATGCTCTATTTGCCGGCAAGGGTGCTAGCCGAGCTTTAGCAAAGATGTCT
VBL6_38_B13_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypogaea cDNA, mRNA sequence.
GO332138.1:386-405
GCAGGATGTTTTATGGACCTGGTGGACCAT386ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCT
VBL6_52_J10_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypogaea cDNA, mRNA sequence.
GO337001.1:198-217
GCAGGATGTTTTATGGACCTGGTGGACCAT198ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCT
VBL6_5_K21_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypogaea cDNA, mRNA sequence.
GO339533.1:310-329
GCAGGATGTTTTATGGACCTGGTGGACCAT310ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCT
LC17 Peanut (Luhua14) seeds full length cDNA Library Arachis hypogaea cDNA 5', mRNA sequence.
GW714397.1:391-410
GCAGGATGTTTTATGGACCTGGTGGACCAT391ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCT
Dur25.root.ADAA-aaf57d01.b1 DUR25-root Arachis duranensis cDNA 5', mRNA sequence.
GW935140.1:396-415
GCAGGATGTTTTATGGACCTGGTGGGCCAT396ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCT
Dur25.seed.ADAA-aaa09a10.b1 DUR25-seed Arachis duranensis cDNA 5', mRNA sequence.
GW939933.1:340-359
GCACGATGTTTTATGGACCTGGTGGGCCAT340ATGCTCTATTTGCCGGCAAGGATGCTAGCGTAGCGTTAGCAAAAATGTCT
Dur25.seed.ADAA-aaa26b04.b1 DUR25-seed Arachis duranensis cDNA 5', mRNA sequence.
GW941248.1:325-344
GCAAGATGTTTTATGGACCTGGTGGGCCAT325ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCT
Dur25.seed.ADAA-aaa65b04.b1 DUR25-seed Arachis duranensis cDNA 5', mRNA sequence.
GW944479.1:392-411
GCAGGATGTTTTATGGACCTGGTGGGCCAT392ATGCTCTATTTGCCGGCAAGGATGCT
Dur25.seed.ADAA-aab77b02.b1 DUR25-seed Arachis duranensis cDNA 5', mRNA sequence.
GW953901.1:401-420
GCAGGATGTTTTATGGACCTGGTGGGCCAT401ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCT
Dur25.seed.ADAA-aad69e05.b1 DUR25-seed Arachis duranensis cDNA 5', mRNA sequence.
GW957915.1:329-348
GCAAGATGTTTTATGGACCTGGTGGGCCAT329ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCT
Ipa.ADAB-aad58c04.b1 IPA1-root Arachis ipaensis cDNA 5', mRNA sequence.
GW971299.1:439-458
GCAGGATGTTTTATGGACCTGGTGGACCAT439ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAA
Ipa.ADAB-aaf18e07.b1 IPA1-seed Arachis ipaensis cDNA 5', mRNA sequence.
GW992252.1:393-412
GCAGGATGTTTTATGGACCTGGTGGACCAT393ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCT
DSL_004669 Developing seed cDNA library of peanut (Arachis hypogaea) Arachis hypogaea cDNA clone ocpga0_0054_H03.ab1, mRNA sequence.
JK151589.1:316-335
GCAGGATGTTTTATGGACCTGGTGGACCAT316ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCT
DSL_017991 Developing seed cDNA library of peanut (Arachis hypogaea) Arachis hypogaea cDNA clone ocpga0_0239_F11.ab1, mRNA sequence.
JK164911.1:431-450
GCAGGATGTTTTATGGACCTGGTGGACCAT431ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCT
NLL_005875 Normal leaf cDNA library of peanut (Arachis hypogaea) Arachis hypogaea cDNA clone ocpnla0_0070_D02.ab1, mRNA sequence.
JK173391.1:123-142
GCAGGATGTTTTATGGACCTGGTGGACCAT123ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCT
RIRL_006043 Ralstonia solanacearum challenged root cDNA library of peanut (Arachis hypogaea) Arachis hypogaea cDNA clone ocprra0_0071_D05.ab1, mRNA sequence.
JK206135.1:316-335
GCAGGATGTTTTATGGACCTGGTGGACCAT316ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCT
TSA: Arachis hypogaea CL1Contig397.Arhy mRNA sequence.
EZ721381.1:376-395
GCAGGATGTTTTATGGACCTGGTGGACCAT376ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCT
TSA: Arachis hypogaea CL1Contig1219.Arhy mRNA sequence.
EZ722203.1:92-111
GCAGGATGTTTTATGGACCTGGTGGACCAT92ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCT
TSA: Arachis duranensis DurSNP_c1055.Ardu mRNA sequence.
HP001054.1:463-482
GCAGGATGTTTTATGGACCTGGTGGGCCAT463ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCT
TSA: Arachis duranensis DurSNP_c13013.Ardu mRNA sequence.
HP013001.1:398-417
GCARGATGTTTTATGGACCTGGTGGGCCAT398ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCT
TSA: Arachis duranensis Aduranensis_small_rep_c785 mRNA sequence.
JR343824.1:293-312
GCAGGATGTTTTATGGACCTGGTGGACCAT293ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCT
TSA: Arachis hypogaea Ahy.Unigene20426 mRNA sequence.
JR560450.1:392-411
GCAGGATGTTTTATGGACCTGGTGGACCAT392ATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCT
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:52416041-52416060
CCAGGATGTTTTACGGACCCGGTGGACCTT52416041ATGCTCTATTTGCCGGCAAGGATGCTAGCCGAGCTTTAGCAAAGATGTCT
Lotus japonicus clone JCVI-FLLj-4O13 unknown mRNA.
BT134970.1:395-414
GCAGGATGTTTTACGGACCCGGTGGACCTT395ATGCTCTATTTGCCGGCAAGGATGCTAGCCGAGCTTTAGCAAAGATGTCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTTGCCGGCAAATAGAGCAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTGCCGGCAAATAGAGCAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.804 | 0.795 | search_plus_done; http://172.18.8.135:50400/match?q=CTTGCCGGCAAATAGAGCAT&k=0&no_gap=0&offset=0&limit=50
4.184 | 3.380 | search_minus_done; http://172.18.8.135:50400/match?q=ATGCTCTATTTGCCGGCAAG&k=0&no_gap=0&offset=0&limit=38
4.212 | 0.028 | cgi_end;

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