GGGenome | Results

2025-04-09 17:24:09, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Ophion ventricosus genome assembly, chromosome: 6.
OZ010716.1:24795258-24795277

ACCAAAAGATGACTCCTCCAATGAGGCGAT24795258CTTGCTCGAAGTCCCGATGTCTCACTACCTCCACGAATTTTAGGTACAAA

EST3288 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 08012802-OUYI_CHAG_39_83.M13+_C11, mRNA sequence.
GE652961.1:285-304

TCTTCAAGGTGTTGAAACAGGTTCATCCGG285ACATCGGGACTTCGAGCAAGGCCATGGGGATCATGAACAGCTTCATCAAC

Pyrrhosoma nymphula genome assembly, chromosome: 7.
OY754334.1:64689427-64689446

TCGCTTCCCTTTCTCCTTATGGCCCTTCCA64689427ACATCGGGACTTCGAGCAAGAGGATCCCATCGATCCAACCCGACCATTCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.109 | 0.100 | search_plus_done; http://172.18.8.135:50400/match?q=CTTGCTCGAAGTCCCGATGT&k=0&no_gap=0&offset=0&limit=50
0.205 | 0.096 | search_minus_done; http://172.18.8.135:50400/match?q=ACATCGGGACTTCGAGCAAG&k=0&no_gap=0&offset=0&limit=49
0.206 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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