GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 22:43:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Melanostigma gelatinosum genome assembly, chromosome: 24.
OX456521.1:2797635-2797654
AAAAAAACAACGTCAGTTTGTTTATATAAT2797635CTTGGAGAAGTCGAGCAGGTTAAACGGAGAAAAATCACTCACATTTTCCG
Tetrao urogallus genome assembly, chromosome: 28.
OX596322.1:619712-619731
AGCAAAAGCGCAAGGAGGAATTGGGATCAG619712CTTGGAGAAGTCGAGCAGGTCGAGCAGCTCTTCATGGCAAGATGAGATGG
Caulobacter segnis ATCC 21756, complete genome.
CP002008.1:1400586-1400605
GGGGTCCAGCTCCATCCGGCCGGCTTCCAA1400586CTTGGAGAAGTCGAGCAGGTCATTGACGATCTCGACCAGAGAGCGGCCCG
Caulobacter segnis strain TK0059 chromosome, complete genome.
CP027850.1:1400520-1400539
GGGGTCCAGCTCCATCCGGCCGGCTTCCAA1400520CTTGGAGAAGTCGAGCAGGTCATTGACGATCTCGACCAGAGAGCGGCCCG
Gimesia panareensis strain Pan110 chromosome, complete genome.
CP036277.1:1010623-1010642
CGCTTCCAGTTCGAGTTTCCCCGCCTCGAT1010623CTTGGAGAAGTCGAGCAGGTCATTGATGATTGAAAGCAGAGATTCCCCCG
Tautonia plasticadhaerens strain ElP plasmid pElP_1, complete sequence.
CP036427.1:91351-91370
CGGGTCCAGCTCGAACTTGCCGGCCTCGAT91351CTTGGAGAAGTCGAGCAGGTCGTTGATGATCGCCAGCAGCGATTCGGCCG
Gimesia panareensis strain Enr10 chromosome.
CP037421.1:1038460-1038479
CGCTTCCAGTTCGAGTTTCCCCGCCTCGAT1038460CTTGGAGAAGTCGAGCAGGTCATTGATGATTGAAAGCAGAGATTCCCCCG
Desulfovibrio sp. JY chromosome, complete genome.
CP082962.1:2728648-2728667
GCATATCTGGCGCATGCTGGCCGTCTTGGG2728648CTTGGAGAAGTCGAGCAGGTTGGTGACGATGCCGTGGATGCGGCCGCATT
Schlegelella aquatica strain LMG 23380 chromosome, complete genome.
CP110257.1:2611061-2611080
GTGCTCGATCTGCAGCTTGCCCGCTTCGAT2611061CTTGGAGAAGTCGAGCAGGTCGTTGAGGACGCCCAGCAACTGCCGCGCCG
Singulisphaera acidiphila DSM 18658, complete genome.
CP003364.1:9110376-9110395
CGGCCGACGCCCTCTTGAGCGTGATCAACG9110376ACCTGCTCGACTTCTCCAAGATCGAGGCCGGCAAGCTCGAACTCGACTTC
Sorangium cellulosum So0157-2, complete genome.
CP003969.1:250950-250969
ACACGGCGCGGCTCCTCAACGTGGTGAGCG250950ACCTGCTCGACTTCTCCAAGGCGGAGGCGGCGCGCATGGAGGTCGACTGG
Myxococcus fulvus 124B02, complete genome.
CP006003.1:9226855-9226874
GCGGCGAGGCGCTCCTGCGGCTCATCAATG9226855ACCTGCTCGACTTCTCCAAGATAGAAGCGGGCGCGTTCGAGCTGGACGGC
Sorangium cellulosum strain So ce836 chromosome, complete genome.
CP012672.1:361269-361288
ACACGGCGCGGCTCCTCAACGTGGTGAGCG361269ACCTGCTCGACTTCTCCAAGGCGGAGGCGGCGCGCATGGAGGTCGACTGG
Gimesia panareensis strain Pan153 chromosome, complete genome.
CP036317.1:3979585-3979604
CGGGGGAATCGCTGCTTTCAATCATCAATG3979585ACCTGCTCGACTTCTCCAAGATCGAGGCGGGGAAACTCGAACTGGAAGCG
Sorangium sp. Soce836 chromosome, complete genome.
CP102233.1:361274-361293
ACACGGCGCGGCTCCTCAACGTGGTGAGCG361274ACCTGCTCGACTTCTCCAAGGCGGAGGCGGCGCGCATGGAGGTCGACTGG
Phenylobacterium sp. NIBR 498073 chromosome, complete genome.
CP114599.1:4022834-4022853
CGGGCGAGGGCCTTCTGCAGACCGTGAACG4022834ACCTGCTCGACTTCTCCAAGCTCGAGGCGGGCCGATTGGTGATCAGGCCT
Massilia sp. R2A-15 chromosome, complete genome.
CP131935.1:794933-794952
ACGCCCAGGCGCTGCTGGCGATCATCAACG794933ACCTGCTCGACTTCTCCAAGATCGAGGCGGGCAAGCTGACCATCGAGAAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTTGGAGAAGTCGAGCAGGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTGGAGAAGTCGAGCAGGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.102 | 0.093 | search_plus_done; http://172.18.8.135:50400/match?q=CTTGGAGAAGTCGAGCAGGT&k=0&no_gap=0&offset=0&limit=50
0.123 | 0.021 | search_minus_done; http://172.18.8.135:50400/match?q=ACCTGCTCGACTTCTCCAAG&k=0&no_gap=0&offset=0&limit=41
0.129 | 0.005 | cgi_end;

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