GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-12-17 02:30:24, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Cucumis melo genomic chromosome, chr_7.
LN713261.1:4072656-4072675
ACAAACATGAGTTACAGACAAAAGATATCA4072656CTTGTTTCGAGACTATGGTGTTGTGTATGTGGGCGCATGTGTACATAATG
Cucumis melo isolate PI 511890 chromosome 10.
CP136109.1:21971758-21971777
CATTATGTACACATGCGCCCACATACACAA21971758CACCATAGTCTCGAAACAAGTGATATCTTTTGTCTGTAACTCATGTTTGT
Cucumis melo genomic scaffold, anchoredscaffold00029.
LN681861.1:46067-46086
CATTATGTACACATGCGCCCACATACACAA46067CACCATAGTCTCGAAACAAGTGATATCTTTTGTCTGTAACTCATGTTTGT
Helwingia omeiensis isolate Yeshanghua genome assembly, chromosome: 6.
OZ077129.1:104800885-104800904
TCTTAAATGACAAATCCATGACGAATCTTT104800885CACCATAGTCTCGAAACAAGCAAGCTTCTCATATAAAAAAATCAATGGAA
Oligia fasciuncula genome assembly, chromosome: 16.
OY720402.1:3488599-3488618
CGTTTGTAAAACAACTATTTCTCCTTTCCA3488599CACCATAGTCTCGAAACAAGTAAACACTTAATGTCAGTAGCGATCCGAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTGTTTCGAGACTATGGTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTGTTTCGAGACTATGGTG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.333 | 0.323 | search_plus_done; http://172.18.8.135:50800/match?q=CTTGTTTCGAGACTATGGTG&k=0&no_gap=0&offset=0&limit=50
0.457 | 0.125 | search_minus_done; http://172.18.8.135:50800/match?q=CACCATAGTCTCGAAACAAG&k=0&no_gap=0&offset=0&limit=49
0.460 | 0.003 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).