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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-08 16:12:12, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Lotus japonicus cDNA clone:MPD055g02_f, 3' end.
AV773706.1:307-325
GCCCATGGTTGGTCGCTCATTTGCTTCAAG307CTTTAAGCACCTGCGAATGATATCTATGTATACTTCATAAGAGACGGGT
Lotus japonicus mRNA, clone: GNr059f03, 5' end sequence.
DC595444.1:329-347
GCCCATTGTTGGTCGCTCATTTGCTTCAAG329CTTTAAGCACCTGCGAATGATATCTATGTATA
Lotus japonicus cDNA, clone: LjFL3-022-DG11.r0, 3'-end sequence.
FS352145.1:332-350
GCCCATTGTTGGTCGCTCATTTGCTTCAAG332CTTTAAGCACCTGCGAATGATATCTATGTATACTTCATAACACACTGGT
Lotus japonicus cDNA, clone: LjFL3-036-CD08.r0, 3'-end sequence.
FS356485.1:345-363
GCCCATTGTTGGTCGCTCATTTGCTTCAAG345CTTTAAGCACCTGCGAATGATATCTATGTATACTTCATAACACACTGGT
LJMAM51TO JCVI-LJ2 Lotus japonicus cDNA 3', mRNA sequence.
GO028334.1:235-253
GCCCATTGTTGGTCGCTCATTTGCTTCAAG235CTTTAAGCACCTGCGAATGATATCTATGTATACTTCATAACACACTGGT
LJNB702TO JCVI-LJ3 Lotus japonicus cDNA 3', mRNA sequence.
GO040866.1:92-110
GCCCATTGTTGGTCGCTCATTTGCTTCAAG92CTTTAAGCACCTGCGAATGATATCTATGTATACTTCATAACACACTGGT
Lotus japonicus DNA, clone:LjT47e17_not.
AG259014.1:1-19
1CTTTAAGCACCTGCGAATGATATCTATGTATACTTCATAACACACTGGT
Marthasterias glacialis genome assembly, chromosome: 4.
OU452222.1:16299583-16299601
ACGCTCAGATGCAGTCAGGTTGTCTGTGCT16299583CTTTAAGCACCTGCGAATGCCAACGTAACACCACCGTGTAGATATGAAA
Lotus japonicus genomic DNA, chromosome 2, clone: LjT47E17, TM1773.
AP009711.1:92215-92233
ACCAGTGTGTTATGAAGTATACATAGATAT92215CATTCGCAGGTGCTTAAAGCTT
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:75745991-75746009
ACCAGTGTGTTATGAAGTATACATAGATAT75745991CATTCGCAGGTGCTTAAAGCTTGAAGCAAATGAGCGACCAACAATGGGC
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:75757709-75757727
ACCAGTGTGTTATGAAGTATACATAGATAT75757709CATTCGCAGGTGCTTAAAGCTTGAAGCAAATGAGCGACCAACAATGGGC
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:75785328-75785346
ACCAGTGTGTTATGAAGTATACATAGATAT75785328CATTCGCAGGTGCTTAAAGCTTGAAGCAAATGAGCGACCAACAATGGGC
Lotus japonicus clone JCVI-FLLj-19M7 unknown mRNA.
BT144220.1:236-254
ACCAGTGTGTTATGAAGTATACATAGATAT236CATTCGCAGGTGCTTAAAGCTTGAAGCAAATGAGCGACCAACAATGGGC
Maratus michaelseni genome assembly, chromosome: 3.
OZ007589.1:433973600-433973618
CTCGTTCGCTGTCGTAAATCGGGTTCTGGG433973600CATTCGCAGGTGCTTAAAGCCGGCTCTCAAAGAAAAAAGATAAGTTATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTTAAGCACCTGCGAATG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTTAAGCACCTGCGAATG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.779 | 0.770 | search_plus_done; http://172.18.8.135:50400/match?q=CTTTAAGCACCTGCGAATG&k=0&no_gap=0&offset=0&limit=50
0.892 | 0.113 | search_minus_done; http://172.18.8.135:50400/match?q=CATTCGCAGGTGCTTAAAG&k=0&no_gap=0&offset=0&limit=42
0.896 | 0.004 | cgi_end;

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