GGGenome | Results

Help | Japanese

2025-04-06 18:58:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

UCRCS08_0005G10_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0005G10, mRNA sequence.
CV715192.1:93-112

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG93CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCCACGTGAACCCAGATCTAA

UCRCS09_11B02_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11B02-D4-1-4.b, mRNA sequence.
CX046931.1:716-735

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG716CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_11G04_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11G04-N8-1-4.b, mRNA sequence.
CX047033.1:716-735

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG716CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_12C07_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12C07-E13-1-5.b, mRNA sequence.
CX047129.1:718-737

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG718CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGTGAACCCAGATCTAA

UCRCS09_12F08_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12F08-K15-1-5.b, mRNA sequence.
CX047186.1:716-735

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG716CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_16B11_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-16B11-C21-1-5.g, mRNA sequence.
CX047730.1:313-332

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG313CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGTGAACCCAGATCTAA

UCRCS09_18B03_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-18B03-D5-1-5.b, mRNA sequence.
CX048014.1:705-724

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG705CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGTGAACCCAGATCTAA

UCRCS09_19B02_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-19B02-D4-1-5.b, mRNA sequence.
CX048121.1:699-718

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG699CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGTGAACCCAGATCTAA

UCRCS09_19B04_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-19B04-D8-1-5.b, mRNA sequence.
CX048125.1:699-718

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG699CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGTGAACCCAGATCTAA

UCRCS09_20A10_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-20A10-A19-1-5.b, mRNA sequence.
CX048379.1:699-718

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG699CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGTGAACCCAGATCTAA

UCRCS09_21B03_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-21B03-C6-1-4.b, mRNA sequence.
CX048487.1:737-756

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG737CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_22A10_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-22A10-B19-1-5.b, mRNA sequence.
CX048578.1:721-740

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG721CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_24G02_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-24G02-M3-1-5.g, mRNA sequence.
CX048965.1:712-731

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG712CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_25A02_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-25A02-A4-1-4.b, mRNA sequence.
CX049008.1:716-735

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG716CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_25B07_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-25B07-C14-1-4.b, mRNA sequence.
CX049036.1:663-682

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG663CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGTGAACCCAGATCTAA

UCRCS09_27C01_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-27C01-F2-1-5.g, mRNA sequence.
CX049379.1:560-579

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG560CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_29A08_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-29A08-A16-1-4.b, mRNA sequence.
CX049685.1:716-735

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG716CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_2G03_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-2G03-M6-1-4.b, mRNA sequence.
CX049979.1:701-720

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG701CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGTGAACCCAGATCTAA

UCRCS09_2H10_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-2H10-O20-1-6.g, mRNA sequence.
CX050013.1:718-737

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG718CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_30B02_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-30B02-D3-1-4.b, mRNA sequence.
CX050039.1:161-180

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG161CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_30E05_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-30E05-J9-1-5.g, mRNA sequence.
CX050117.1:556-575

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG556CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_30E06_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-30E06-J11-1-5.g, mRNA sequence.
CX050119.1:704-723

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG704CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGTGAACCCAGATCTAA

UCRCS09_30E12_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-30E12-J23-1-6.g, mRNA sequence.
CX050125.1:214-233

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG214CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_32F06_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-32F06-K11-1-4.g, mRNA sequence.
CX050476.1:335-354

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG335CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGTGAACCCAGATCTAA

UCRCS09_35E01_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-35E01-J2-1-5.b, mRNA sequence.
CX050924.1:715-734

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG715CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_35E10_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-35E10-J20-1-6.b, mRNA sequence.
CX050939.1:91-110

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG91CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_36A04_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-36A04-A7-1-5.g, mRNA sequence.
CX051012.1:698-717

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG698CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_38F12_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-38F12-L23-1-6.g, mRNA sequence.
CX051272.1:249-268

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG249CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_38H09_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-38H09-P17-1-5.g, mRNA sequence.
CX051276.1:249-268

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG249CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_3A07_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-3A07-B13-1-4.b, mRNA sequence.
CX051343.1:717-736

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG717CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGTGAACCCAGATCTAA

UCRCS09_41H08_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-41H08-O16-1-7.b, mRNA sequence.
CX051768.1:715-734

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG715CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_43A01_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-43A01-B2-1-6.g, mRNA sequence.
CX051939.1:731-750

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG731CTTTGACGAGCGTCTGTTGGCT

UCRCS09_43A03_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-43A03-B6-1-7.b, mRNA sequence.
CX051944.1:716-735

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG716CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_43H04_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-43H04-P8-1-6.g, mRNA sequence.
CX052091.1:467-486

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG467CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGTGAACCCAGATCTAA

UCRCS09_44G04_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-44G04-M7-1-6.g, mRNA sequence.
CX052229.1:704-723

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG704CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_45H06_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-45H06-O12-1-7.b, mRNA sequence.
CX052430.1:716-735

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG716CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_46E09_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-46E09-J17-1-7.b, mRNA sequence.
CX052534.1:717-736

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG717CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_47D12_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-47D12-H24-1-6.g, mRNA sequence.
CX052687.1:335-354

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG335CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGTGAACCCAGATCTAA

UCRCS09_49D04_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-49D04-G8-1-6.g, mRNA sequence.
CX053011.1:658-677

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG658CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_49D12_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-49D12-G24-1-7.b, mRNA sequence.
CX053027.1:716-735

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG716CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGTGAACCCAGATCTAA

UCRCS09_5C09_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-5C09-E18-1-4.b, mRNA sequence.
CX053319.1:717-736

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG717CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_5F10_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-5F10-K20-1-5.b, mRNA sequence.
CX053378.1:162-181

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG162CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_5H09_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-5H09-O18-1-4.b, mRNA sequence.
CX053417.1:717-736

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG717CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_6A11_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-6A11-B21-1-5.b, mRNA sequence.
CX053442.1:727-746

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG727CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_6E09_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-6E09-J17-1-4.b, mRNA sequence.
CX053515.1:736-755

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG736CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGTGAACCCAGATCTAA

UCRCS09_9A01_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-9A01-A2-1-4.b, mRNA sequence.
CX053900.1:91-110

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG91CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

UCRCS09_9H11_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-9H11-O22-1-5.b, mRNA sequence.
CX054053.1:662-681

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG662CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGTGAACCCAGATCTAA

UCRCS08_19F07_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-19F07-L13-1-4.b, mRNA sequence.
CX070907.1:716-735

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG716CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGCGAACCCAGATCTAA

Citrus sinensis genome assembly, chromosome: 6.
OY754323.1:26300712-26300731

CAGCAGGAGAGGTGGCAATCTCTTCCGCGG26300712CTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGTGAACCCAGATCTAA

UCRCS09_6E09_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-6E09-J17-1-5.g, mRNA sequence.
CX053516.1:808-827

TTAGATCTGGGTTCACGTTGAAGGCCTCAG808CCAACAGACGCTCGTCAAAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTTTGACGAGCGTCTGTTGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTTGACGAGCGTCTGTTGG | format : html | download : | debug :

0.009 | 0.009 | search_start;
2.150 | 2.141 | search_plus_done; http://172.18.8.135:50400/match?q=CTTTGACGAGCGTCTGTTGG&k=0&no_gap=0&offset=0&limit=50
2.271 | 0.121 | search_minus_done; http://172.18.8.135:50400/match?q=CCAACAGACGCTCGTCAAAG&k=0&no_gap=0&offset=0&limit=1
2.271 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).