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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 11:49:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

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Fagus sylvatica genome assembly, chromosome: 2.
OU015762.1:6750313-6750332
TTGGCTTAAAATTCCACTTTTTTAAGTTCT6750313CTTTGCGTGTTTGTGCTGTTAGAGCATTCCCAACAGGTCTGCCAAAACCC
Citrus sinensis genome assembly, chromosome: 9.
OY754326.1:4164386-4164405
CAAAGCCTTTTTTTCCCTTCTTCTTCTTCG4164386CTTTGCGTGTTTGTGCTGTTGCTTATGCCTAACTCGTCGTCATGGTGGAG
Xanthorhoe spadicearia genome assembly, chromosome: 11.
OX352205.1:6788885-6788904
ATCTGTAAATGTGAAACTTTTTGTTATCAC6788885CTTTGCGTGTTTGTGCTGTTGTTTCTCTAAATTGTACAGAAATACGAGTA
UCRCS06_0002F19_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002F19, mRNA sequence.
CN189753.1:104-123
CTCCACCATGACGACGAGTTAGGCATAAGC104AACAGCACAAACACGCAAAGCGAAGAAGAAGAAGGGAAAAAAAGGCTTTG
UCRPT01_0005K15_r Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0005K15, mRNA sequence.
CV704617.1:99-118
CTCCACCATGACGACGAGTTAGGTATAAGC99AACAGCACAAACACGCAAAGCGAAGAAGAAGAAGGGAAAAAAAGGCTTTG
UCRPT01_0005O03_r Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0005O03, mRNA sequence.
CV704760.1:135-154
CTCCACCATGACGACGAGTTAGGTATAAGC135AACAGCACAAACACGCAAAGCGAAGAAGAAGAAGGGAAAAAACGGCTTTG
UCRPT01_0011I02_r Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0011I02, mRNA sequence.
CV708555.1:81-100
CTCCACCATGACGACGAGTTAGGTATAAGC81AACAGCACAAACACGCAAAGCGAAGAAGAAGAAGGAAAAAAACGGCTTTG
IC0AAA10BE01RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY262932.1:100-119
CTCCACCATGACGACGAGTTAGGCATAAGC100AACAGCACAAACACGCAAAGCGAAGAAGAAGAAGGAAAAAAAAGGCTTTG
IC0AAA11AF07RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY263223.1:144-163
CTCCACCATGACGACGAGTTAGGCATAAGC144AACAGCACAAACACGCAAAGCGAAGAAGAAGAAGGGAAAAAAAGGCTTTG
IC0AAA13CF02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY264115.1:95-114
CTACACCATGACGACGAGTTAGGTATAAGC95AACAGCACAAACACGCAAAGCGAAGAAGAAGGGAAAAAAAGGCTTTGGTA
IC0AAA16BH04RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY265135.1:172-191
CTCCACCATGACGACGAGTTAGGTATAAGC172AACAGCACAAACACGCAAAGCGAAGAAGAAGGGAAAAAAAGGCTTTGGTA
IC0AAA29BB06RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY270267.1:140-159
CTACACCATGACGACGAGTTAGGTATAAGC140AACAGCACAAACACGCAAAGCGAAGAAGAAGGGAAAAAAAGGCTTTGGTA
IC0AAA43BF04RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY277265.1:34-53
CTCCATCATGACGACGAGTTAGGCATAAGC34AACAGCACAAACACGCAAAGCGAAGAAGAAGAAGGGAAAAAAAGGCTTTG
IC0AAA51DB03RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY280650.1:102-121
CTACACCATGACGACGAGTTAGGTATAAGC102AACAGCACAAACACGCAAAGCGAAGAAGAAGGGAAAAAAAGGCTTTGGTA
IC0AAA52BB03RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY280830.1:98-117
CTACACCATGACGACGAGTTAGGTATAAGC98AACAGCACAAACACGCAAAGCGAAGAAGAAGGGAAAAAAAGGCTTTGGTA
IC0AAA55AC07RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY281841.1:153-172
CTCCACCATGACGACGAGTTAGGCATAAGC153AACAGCACAAACACGCAAAGCGAAGAAGAAGAAGGGAAAAAAAGGCTTTG
IC0AAA66CH02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY287031.1:149-168
CTACACCATGACGACGAGTTAGGTATAAGC149AACAGCACAAACACGCAAAGCGAAGAAGAAGGGAAAAAAAGGCTTTGGTA
IC0AAA73CC06RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY289781.1:133-152
CTACACCATGACGACGAGTTAGGTATAAGC133AACAGCACAAACACGCAAAGCGAAGAAGAAGGGAAAAAAAGGCTTTGGTA
IC0AAA78BD11RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY291511.1:153-172
CTCCACCATGACGACGAGTTAGGCATAAGC153AACAGCACAAACACGCAAAGCGAAGAAGAAGAAGGGAAAAAAAGGCTTTG
IC0AAA88AE03RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY295379.1:82-101
CTACACCATGACGACGAGTTAGGTATAAGC82AACAGCACAAACACGCAAAGCGAAGAAGAAGGGAAAAAAAGGCTTTGGTA
IC0AAA93BC01RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY297637.1:246-265
CTACACCATGACGACGAGTTAGGTATAAGC246AACAGCACAAACACGCAAAGCGAAGAAGAAGGGAAAAAAAGGCTTTGGTA
KN0AAQ6YM24RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY303795.1:98-117
CTACACCATGACGACGAGTTAGGTATAAGC98AACAGCACAAACACGCAAAGCGAAGAAGAAGGGAAAAAAAGGCTTTGGTA
CS00-C1-102-016-C10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
EY666561.1:81-100
CTCCACCATGACGACGAGTTAGGCATAAGC81AACAGCACAAACACGCAAAGCGAAGAAGAAGAAGGGAAAAAAAGGCTTTG
CS00-C1-102-099-E12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
EY668037.1:107-126
CTCCACCATGACGAGGAGTTATGCATAAGC107AACAGCACAAACACGCAAAGCGAAGAAGAAGAAGGGAAAAAAAGGCTTTG
CS00-C1-102-076-A09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
EY669522.1:106-125
CTCCACCATGACGACGAGTTAGGCATAAGC106AACAGCACAAACACGCAAAGCGAAGAAGAAGAAGGGAAAAAAAGGCTTTG
CS00-C1-102-101-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
EY672535.1:107-126
CTCCACCATGACGACGAGTTAGGCATAAGC107AACAGCACAAACACGCAAAGCGAAGAAGAAGAAGGGAAAAAAAGGCTTTG
CR05-C3-700-144-G11-CT.F Mandarin fruit, development stadium (1 of 3) Citrus reticulata cDNA, mRNA sequence.
EY792629.1:155-174
CTCCACCATGACGACGAGTTAGGCATAAGC155AACAGCACAAACACGCAAAGCGAAGAAGAAGAAGGGAAAAAAAGGCTTTG
CM30-C1-401-089-E08-CT.F Sweet lime leaf, infected with CiLV Citrus limettioides cDNA, mRNA sequence.
EY866228.1:91-110
CTCCACCATGACGACGAGTTAGGTATAAGC91AACAGCACAAACACGCAAAGCGAAGAAGAAGAAGGGAAAAAAAAAGGCTT
IC0AAA55AC07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA55AC07, mRNA sequence.
FC878215.1:153-172
CTCCACCATGACGACGAGTTAGGCATAAGC153AACAGCACAAACACGCAAAGCGAAGAAGAAGAAGGGAAAAAAAGGCTTTG
IC0AAA51DB03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA51DB03, mRNA sequence.
FC879598.1:102-121
CTACACCATGACGACGAGTTAGGTATAAGC102AACAGCACAAACACGCAAAGCGAAGAAGAAGGGAAAAAAAGGCTTTGGTA
IC0AAA78BD11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA78BD11, mRNA sequence.
FC881724.1:153-172
CTCCACCATGACGACGAGTTAGGCATAAGC153AACAGCACAAACACGCAAAGCGAAGAAGAAGAAGGGAAAAAAAGGCTTTG
IC0AAA93BC01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA93BC01, mRNA sequence.
FC887243.1:246-265
CTACACCATGACGACGAGTTAGGTATAAGC246AACAGCACAAACACGCAAAGCGAAGAAGAAGGGAAAAAAAGGCTTTGGTA
IC0AAA73CC06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA73CC06, mRNA sequence.
FC887611.1:133-152
CTACACCATGACGACGAGTTAGGTATAAGC133AACAGCACAAACACGCAAAGCGAAGAAGAAGGGAAAAAAAGGCTTTGGTA
IC0AAA52BB03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA52BB03, mRNA sequence.
FC891797.1:98-117
CTACACCATGACGACGAGTTAGGTATAAGC98AACAGCACAAACACGCAAAGCGAAGAAGAAGGGAAAAAAAGGCTTTGGTA
IC0AAA11AF07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA11AF07, mRNA sequence.
FC893464.1:144-163
CTCCACCATGACGACGAGTTAGGCATAAGC144AACAGCACAAACACGCAAAGCGAAGAAGAAGAAGGGAAAAAAAGGCTTTG
IC0AAA43BF04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA43BF04, mRNA sequence.
FC895290.1:30-49
TCCATCATGACGACGAGTTAGGCATAAGC30AACAGCACAAACACGCAAAGCGAAGAAGAAGAAGGGAAAAAAAGGCTTTG
IC0AAA66CH02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA66CH02, mRNA sequence.
FC899335.1:149-168
CTACACCATGACGACGAGTTAGGTATAAGC149AACAGCACAAACACGCAAAGCGAAGAAGAAGGGAAAAAAAGGCTTTGGTA
IC0AAA88AE03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA88AE03, mRNA sequence.
FC899359.1:82-101
CTACACCATGACGACGAGTTAGGTATAAGC82AACAGCACAAACACGCAAAGCGAAGAAGAAGGGAAAAAAAGGCTTTGGTA
IC0AAA16BH04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA16BH04, mRNA sequence.
FC899961.1:172-191
CTCCACCATGACGACGAGTTAGGTATAAGC172AACAGCACAAACACGCAAAGCGAAGAAGAAGGGAAAAAAAGGCTTTGGTA
KN0AAQ6YM24RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ6YM24, mRNA sequence.
FC901220.1:98-117
CTACACCATGACGACGAGTTAGGTATAAGC98AACAGCACAAACACGCAAAGCGAAGAAGAAGGGAAAAAAAGGCTTTGGTA
IC0AAA29BB06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA29BB06, mRNA sequence.
FC911580.1:140-159
CTACACCATGACGACGAGTTAGGTATAAGC140AACAGCACAAACACGCAAAGCGAAGAAGAAGGGAAAAAAAGGCTTTGGTA
IC0AAA13CF02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA13CF02, mRNA sequence.
FC913302.1:95-114
CTACACCATGACGACGAGTTAGGTATAAGC95AACAGCACAAACACGCAAAGCGAAGAAGAAGGGAAAAAAAGGCTTTGGTA
IC0AAA10BE01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA10BE01, mRNA sequence.
FC915134.1:100-119
CTCCACCATGACGACGAGTTAGGCATAAGC100AACAGCACAAACACGCAAAGCGAAGAAGAAGAAGGAAAAAAAAGGCTTTG
C32107F02EF RVDevelopN Citrus clementina cDNA clone C32107F02, mRNA sequence.
FC921636.1:112-131
CTACACCATGACGACGAGTTAGGTATAAGC112AACAGCACAAACACGCAAAGCGAAGAAGAAGGGAAAAAAAGGCTTTGGTA
Fagus sylvatica genome assembly, chromosome: 2.
OU015762.1:6713542-6713561
GGGTTTTGGCAGACCTGTTGGGAATGCTCT6713542AACAGCACAAACACGCAAAGAGAACTTAAAAAAGTGGAATTTTAAGCCAA
Sympetrum striolatum genome assembly, chromosome: 9.
OX388349.1:69232873-69232892
GCAAATCCTGCGCACGGCCCTGGTCTACAG69232873AACAGCACAAACACGCAAAGATGTGCCACAACAAGCGACTATTCATACAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTTGCGTGTTTGTGCTGTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTTGCGTGTTTGTGCTGTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.100 | 0.091 | search_plus_done; http://172.18.8.135:50400/match?q=CTTTGCGTGTTTGTGCTGTT&k=0&no_gap=0&offset=0&limit=50
2.404 | 2.304 | search_minus_done; http://172.18.8.135:50400/match?q=AACAGCACAAACACGCAAAG&k=0&no_gap=0&offset=0&limit=47
2.432 | 0.028 | cgi_end;

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