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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 19:33:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

KS09025E03 KS09 Capsicum annuum cDNA, mRNA sequence.
CA514485.1:115-134
AGTTGGTGTAAAGACAACTGTTGCGATTGT115CTTTGGACGGCTGTGTTTGGTTCCTCCAACTGGACTCGGCATTGTCATGT
KS17025G08 KS17 Capsicum annuum cDNA, mRNA sequence.
GD077867.1:178-197
AGTTGGTGTAAAGACAACTGTTGCGATTGT178CTTTGGACGGCTGTGTTTGGTTCCTCCAACTGGACTCGGCATTGTCATGT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 10.
CP124722.1:152683746-152683765
AGTTGGTGTAAAGACAACTGTTGCGATTGT152683746CTTTGGACGGCTGTGTTTGGTTCCTCCAACTGGACTCGGCATTGTCATGT
Mobula hypostoma genome assembly, chromosome: 8.
OY992599.1:106661184-106661203
CTCACCTTGTGCACATGAGCATTGCCAAAA106661184CCAAACACAGCCGTCCAAAGGGAATAAAGGAATACAAAAGCAGGAAAGTA
KS16042E07 KS16 Capsicum annuum cDNA, mRNA sequence.
GD073397.1:618-637
ACATGACAATGCCGAGTCCAGTTGGAGGAA618CCAAACACAGCCGTCCAAAGACAATCGCAACAGTTGTCTTTACACCAACT
KS16055D04 KS16 Capsicum annuum cDNA, mRNA sequence.
GD074611.1:634-653
ACATGACAATGCCGAGTCCAGTTGGAGGAA634CCAAACACAGCCGTCCAAAGACAATCGCAACAGTTGTCTTTACACCAACT
TSA: Capsicum annuum MGMT_Contig24238, mRNA sequence.
JW074482.1:1069-1088
ACATGACAATGCCGAGTCCAGTTGGAGGAA1069CCAAACACAGCCGTCCAAAGACAATCGCAACAGTTGTCTTTACACCAACT
TSA: Capsicum annuum MGMT_Contig30343, mRNA sequence.
JW080587.1:7-26
GAGGAA7CCAAACACAGCCGTCCAAAGACAATCGCAACAGTTGTCTTTACACCAACT
Capsicum annuum Takanotsume DNA, chromosome 10, sequence.
AP026705.1:163389472-163389491
ACATGACAATGCCGAGTCCAGTTGGAGGAA163389472CCAAACACAGCCGTCCAAAGACAATCGCAACAGTTGTCTTTACACCAACT
Solanum dulcamara genome assembly, chromosome: 12.
OX359263.1:12899628-12899647
ATGTGACAATACCAAGTCCAGTTGGAGGAA12899628CCAAACACAGCCGTCCAAAGACAATCGCAGCAGTAGTCTTTAGACCAATT
Aradus depressus genome assembly, chromosome: 6.
OY759220.1:27311363-27311382
CTGCTTCCCCGTAAGAAAAAAGGCTACTTA27311363CCAAACACAGCCGTCCAAAGCACCACTAGTCCTAACCAGATCCACATCGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTTGGACGGCTGTGTTTGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTTGGACGGCTGTGTTTGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.417 | 0.408 | search_plus_done; http://172.18.8.135:50400/match?q=CTTTGGACGGCTGTGTTTGG&k=0&no_gap=0&offset=0&limit=50
0.751 | 0.334 | search_minus_done; http://172.18.8.135:50400/match?q=CCAAACACAGCCGTCCAAAG&k=0&no_gap=0&offset=0&limit=47
0.756 | 0.005 | cgi_end;

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