GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 08:47:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Mus musculus BAC clone RP24-401L2 from chromosome 17, complete sequence.
AC154194.2:83289-83306
GAGAACATGTAGGAAGTACTCAAAAGGAGA83289CTTTGGATTGTTGACCTTCTGTTAGTGACAAATATTTTGTCATCAAAA
Mus musculus genome assembly, chromosome: 17.
OW971559.1:57266803-57266820
GAGAACATGTAGGAAGTACTCAAAAGGAGA57266803CTTTGGATTGTTGACCTTCTGTTAGTGACAAATATTTTGTCATCAAAA
Mus musculus genome assembly, chromosome: 17.
OW971590.1:57416696-57416713
GAGAACATGTAGGAAGTACTCAAAAGGAGA57416696CTTTGGATTGTTGACCTTCTGTTAGTGACAAATATTTTGTCATCAAAA
Mus musculus genome assembly, chromosome: 17.
OW971611.1:57640825-57640842
GAGAACATGTAGGAAGTACTCAAAAGGAGA57640825CTTTGGATTGTTGACCTTCTGTTAGTGACAAATATTTTGTCATCAAAA
Mus musculus domesticus genome assembly, chromosome: 17.
OW971633.1:58240048-58240065
GAGAACATGTAGGAAGTACTCAAAAGGAGA58240048CTTTGGATTGTTGACCTTCTGTTAGTGACAAATATTTTGTCATCAAAA
Mus musculus genome assembly, chromosome: 17.
OW971653.1:58311993-58312010
GAGAACATGTAGGAAGTACTCAAAAGGAGA58311993CTTTGGATTGTTGACCTTCTGTTAGTGACAAATATTTTGTCATCAAAA
Mus musculus molossinus genome assembly, chromosome: 17.
OW971674.1:59951778-59951795
GAGAACATGTAGGAAGTACTCAAAAGGAGA59951778CTTTGGATTGTTGACCTTCTGTTAGTGACAAATATTTTGTCATCAAAA
Mus spretus genome assembly, chromosome: 17.
OW971695.1:57564744-57564761
GAGAACATGTAGGAAGTACTCAAAAGGAAA57564744CTTTGGATTGTTGACCTTCATTTAGTGACAAATATTTTGTCATCAAAA
Mus musculus genome assembly, chromosome: 17.
OW971707.1:57905990-57906007
GAGAACATGTAGGAAGTACTCAAAAGGAGA57905990CTTTGGATTGTTGACCTTCTGTTAGTGACAAATATTTTGTCATCAAAA
Mus musculus genome assembly, chromosome: 17.
OW971737.1:57193122-57193139
GAGAACATGTAGGAAGTACTCAAAAGGAGA57193122CTTTGGATTGTTGACCTTCTGTTAGTGACAAATATTTTGTCATCAAAA
Mus musculus genome assembly, chromosome: 17.
OW971758.1:58567989-58568006
GAGAACATGTAGGAAGTACTCAAAAGGAGA58567989CTTTGGATTGTTGACCTTCTGTTAGTGACAAATATTTTGTCATCAAAA
Mus musculus musculus genome assembly, chromosome: 17.
OW971779.1:57204125-57204142
GAGAACATGTAGGAAGTACTCAAAAGGAGA57204125CTTTGGATTGTTGACCTTCTGTTAGTGACAAATATTTTGTCATCAAAA
Mus musculus genome assembly, chromosome: 17.
OW971800.1:57400481-57400498
GAGAACATGTAGGAAGTACTCAAAAGGAGA57400481CTTTGGATTGTTGACCTTCTGTTAGTGACAAATATTTTGTCATCAAAA
Mus musculus genome assembly, chromosome: 17.
OW971821.1:60268208-60268225
GAGAACATGTAGGAAGTACTCAAAAGGAGA60268208CTTTGGATTGTTGACCTTCTGTTAGTGACAAATATTTTGTCATCAAAA
Mus musculus castaneus genome assembly, chromosome: 17.
OW971833.1:58269741-58269758
GAGAACATGTAGGAAGTACTCAAAAGGAGA58269741CTTTGGATTGTTGACCTTCTGTTAGTGACAAATATTTTGTCATCAAAA
Mus musculus genome assembly, chromosome: 17.
OW971852.1:57624278-57624295
GAGAACATGTAGGAAGTACTCAAAAGGAGA57624278CTTTGGATTGTTGACCTTCTGTTAGTGACAAATATTTTGTCATCAAAA
Mus musculus genome assembly, chromosome: 17.
OX389811.1:63530457-63530474
GAGAACATGTAGGAAGTACTCAAAAGGAGA63530457CTTTGGATTGTTGACCTTCTGTTAGTGACAAATATTTTGTCATCAAAA
Mus musculus genome assembly, chromosome: 17.
OX390160.1:61239931-61239948
GAGAACATGTAGGAAGTACTCAAAAGGAGA61239931CTTTGGATTGTTGACCTTCTGTTAGTGACAAATATTTTGTCATCAAAA
Mus musculus genome assembly, chromosome: 17.
OX439030.1:63976355-63976372
GAGAACATGTAGGAAGTACTCAAAAGGAGA63976355CTTTGGATTGTTGACCTTCTGTTAGTGACAAATATTTTGTCATCAAAA
Pipistrellus pipistrellus genome assembly, chromosome: 3.
LR862358.1:27861997-27862014
TAGTCTGGAAACTAAGGCTCTTAGTTATAC27861997CTTTGGATTGTTGACCTTAAGCAATTTCCTGTCAACATTGGATTACAA
Orcinus orca genome assembly, chromosome: 3.
OW443362.1:33399359-33399376
ATATGATGGACCAGGCAGAATAGCTCACGT33399359CTTTGGATTGTTGACCTTACATTCTAGAGAAAATAAAAGAAATAGGCA
Pipistrellus pygmaeus genome assembly, chromosome: 3.
OX465304.1:29947286-29947303
TAGTCTGGAAACTAAGGCTCTTAGTTATAC29947286CTTTGGATTGTTGACCTTAAGCAATTTCCTGTCAACATTGGATTACAA
Delphinus delphis genome assembly, chromosome: 3.
OX465328.1:31859018-31859035
ATATGATGGACCAGGCAGAATAGCTCACGT31859018CTTTGGATTGTTGACCTTACATTTTAGAGAAAATAAAAGAAATAGGCA
Neostethus bicornis genome assembly, chromosome: 10.
LR738561.1:13660712-13660729
GACAATTTGTGGCTTAGTTTGACAACATCA13660712CTTTGGATTGTTGACCTTTACAGAAACCGTTACCCTCGAGTTTTCAGG
Syngnathus acus genome assembly, chromosome: 1.
OX411225.1:11387785-11387802
GGGGGAAAACATCACCTGCACTCTTGTCAT11387785CTTTGGATTGTTGACCTTCACATAGCTCATGGCTGTTTGGCAAGATTC
Mus musculus molossinus DNA, clone:MSMg01-469I05.TJ, genomic survey sequence.
AG552733.1:608-625
GAGAACATGTAGGAAGTACTCAAAAGGAGA608CTTTGGATTGTTGACCTTCTGTTAGTGACAAATATTTTGTCATCAAAA
Mus musculus NOD/MrkTac GSS, clone DN-466M16 5' sequence.
FR295882.1:516-533
GAGAACATGTAGGAAGTACTCAAAAGGAGA516CTTTGGATTGTTGACCTTCTGTTAGTGACAAATATTTTGTCATCAAAA
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH039L17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces.
AC241126.1:21963-21980
ACTTGAACTTTACATGTTACCGCTGCTCAT21963CTTTGGATTGTTGACCTTGATTCCACCAGTAGCTGAAAGAACTGTAAA
Vicia faba genome assembly, chromosome: 4.
OX451739.1:1180935177-1180935194
CAAAAACAGAGGTCCTCACTCATGCACACG1180935177CTTTGGATTGTTGACCTTTAATATTTGTTATGCGTTACGTCTTTATTG
Ajuga chamaepitys genome assembly, chromosome: 3.
OY282497.1:27312788-27312805
CCTTATATTAGGAAGCTAATTTCTGAATCT27312788CTTTGGATTGTTGACCTTCTTCCTCGGTTTGTTTCTGGTTGAACAATT
Rosa rugosa genome assembly, chromosome: 2.
OY288192.1:44232368-44232385
TATCGTTGGGGTTTTTATCGTTGGGCGTTA44232368CTTTGGATTGTTGACCTTTGGGCCTTTATCGATGGCTATTCTATTCTA
Autographa gamma genome assembly, chromosome: 12.
LR989861.1:7530457-7530474
GCTATACGTGACTGGTTTTTAGTGTTCGAC7530457CTTTGGATTGTTGACCTTTCGCGACTGACCGCGAGCCATGCAATCTGT
3_Tms_b3v08.
OB800755.1:3118-3135
TTTTCATTCCTTATCTTATCCAACTTTGTC3118CTTTGGATTGTTGACCTTAGCAACTTTATCTCTGGTGAGGGTACATGT
4_Tbi_b3v08.
OD572535.1:3197-3214
TTTTCATTCCTTATTTTATCCAACTTTGTC3197CTTTGGATTGTTGACCTTAACAACTTCATCTCTGATGCCTGCAGTCTT
4_Tbi_b3v08.
OD684457.1:30-47
TTTCATTCCTTATTTTATCCAACTTTGTC30CTTTGGATTGTTGACCTTAACAACTTCATCTCTGATGCCTGCAGTCTT
4_Tte_b3v08.
OE002662.1:96267-96284
TTTTCATTCCTTATTTTATCCAACTTTGTC96267CTTTGGATTGTTGACCTTAACAACTTCATCTCTGATGCCTGCAGTCTT
5_Tge_b3v08.
OE842374.1:67738-67755
TTTTCATTCCTTATTTTATCCAACTTTGTC67738CTTTGGATTGTTGACCTTAGCAACTTCATCTCTGATGCCTGCAGTCTT
Mesoligia furuncula genome assembly, chromosome: 4.
OU744794.1:11508925-11508942
ATTAGCAATGGAAAAATATGCGAAAAATGT11508925CTTTGGATTGTTGACCTTGTCACATTCTATTAATTAGATTGTTTACTA
Protodeltote pygarga genome assembly, chromosome: 3.
OW388251.2:112029-112046
AACTGAACTTATCGATGGCCACTCGATATT112029CTTTGGATTGTTGACCTTCTTGGATTCTGTATTATATAATAGGTATAC
Chrysolina oricalcia genome assembly, chromosome: 2.
OX101810.2:29957014-29957031
GTTTTTTCTATTATGACTGCTTACCCACTC29957014CTTTGGATTGTTGACCTTGCAAATAATAACTTTACTCTCTAACTCGTC
Netelia dilatata genome assembly, chromosome: 2.
OX328012.1:18294451-18294468
GGCATGGTGAGGCAAATAGAAGCCCTCTTC18294451CTTTGGATTGTTGACCTTGGTCAAGTATCCTAGTTTTAAATATTCGGC
Netelia dilatata genome assembly, chromosome: 6.
OX328016.1:24221205-24221222
GGCATGGTGAGGCAAATAGAAGCCCTCTTC24221205CTTTGGATTGTTGACCTTGGTCAAGTATCCTAGTTTTAAATATTCGGC
Nycteola revayana genome assembly, chromosome: 10.
OX344848.2:13852209-13852226
ATAAAATTAAATACCAGTTTTTACTTTGAC13852209CTTTGGATTGTTGACCTTTTGCAATACGTTCGAGGGCCGTGAGGGATC
Oegoconia quadripuncta genome assembly, chromosome: 7.
OX438748.1:21473996-21474013
TATTCCAATAAGTATTTCCTATTTGCCTGA21473996CTTTGGATTGTTGACCTTCAAACACTCCACAGGAGTTCGGGCCTGGCG
Pasiphila rectangulata genome assembly, chromosome: 16.
OY720251.1:4265505-4265522
GTTGCCTTCTATTAAATTAATTTGTATTGT4265505CTTTGGATTGTTGACCTTATGATGTGGGTAGGTACTTCCCATCGGTTT
Labia minor genome assembly, chromosome: 2.
OY720345.1:68849486-68849503
TTTCAAAAGTACATATGCAATAAGAGGGTG68849486CTTTGGATTGTTGACCTTTCTTCGGTCCTCCGAGCCCTCCATCATTGT
Hydrotaea diabolus genome assembly, chromosome: 1.
OY740716.1:146437164-146437181
TTTTGAATTGATTATGAGTATCGAAAAATA146437164CTTTGGATTGTTGACCTTTCTTTTGCGTGCTAGTAATATAAATCAGTA
Amblyjoppa fuscipennis genome assembly, chromosome: 4.
OY754491.1:27822609-27822626
TTTGAGGTCTCAATACTCTTCGACAATACT27822609CTTTGGATTGTTGACCTTACTCCGATACATACAGTACAAGATAGAAAA
Euplagia quadripunctaria genome assembly, chromosome: 11.
OY982570.1:19601062-19601079
TGGTGTAACATTAATTAGTTCATACAATGG19601062CTTTGGATTGTTGACCTTGCCATGCCTGGCGCGGCCTGGCTCACGCCC
Aphodius sticticus genome assembly, chromosome: 2.
OZ014507.1:86901378-86901395
GATTGGAGATAATTTGGTTCAAGGGAGTTT86901378CTTTGGATTGTTGACCTTGCAGTCGCTTAATATGAACTACAATGGACT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTTGGATTGTTGACCTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTTGGATTGTTGACCTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.451 | 0.443 | search_plus_done; http://172.18.8.135:50400/match?q=CTTTGGATTGTTGACCTT&k=0&no_gap=0&offset=0&limit=50
0.573 | 0.122 | search_minus_done; http://172.18.8.135:50400/match?q=AAGGTCAACAATCCAAAG&k=0&no_gap=0&offset=0&limit=0
0.573 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).