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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:39:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Podarcis cretensis genome assembly, chromosome: 2.
OX638150.1:106961040-106961059
CCCACTTTCCTGATCACAAAAAATCTGAGC106961040CTTTGGGGAAATTGGGTTTTTTTTTCACAAGAAGACCTCCCAGTCAAACA
COT_CE_H12 Fiber and Ovule of Xu-142 Lambda Zap Express Library Gossypium hirsutum cDNA 3' similar to (U34401) FbLate-2 gene product [Gossypium barbadense], mRNA sequence.
DT046950.1:513-532
CGTGTTTCTCATGCTCTTTAGGCTTTTCCC513CTTTGGGGAAATTGGGTTTTTCTTTCTCGTACTCTTCG
D01_435780.37.S1104183188.anther-SP17892 Normalized cDNA library of anther of upland cotton cultivar CCRI36 Gossypium hirsutum cDNA 3', mRNA sequence.
JK698323.1:421-440
CGGGTTTCCCATGCTCTTTAGGCTTTTCCC421CTTTGGGGAAATTGGGTTTTTCTTTCCCGAACTCTTCGGGCCCCTTCGAT
D01_435780.37.S1104183188.anther-SP17892 Normalized cDNA library of anther of upland cotton cultivar CCRI36 Gossypium hirsutum cDNA 3', mRNA sequence.
JK698323.1:589-608
CATGTTTCCCGGGCTCTTTGGGCTTTTCCC589CTTTGGGGAAATTGGGTTTTTCTTTCC
95801 Tomato HindIII BAC Library Solanum lycopersicum genomic clone LE_HBa0108D21 5, genomic survey sequence.
DU057026.1:557-576
ATTTCATTTTCTTTGCTAATTTGTGTATTT557CTTTGGGGAAATTGGGTTTTTTTCCTTTTCAACTCATTCTTTTTTATGAA
Solanum lycopersicum strain Heinz 1706 chromosome 1 clone slm-3c2 map 1, complete sequence.
AC245993.5:1898-1917
ATTTCATTTTCTTTGCTAATTTGTGTATTT1898CTTTGGGGAAATTGGGTTTTTTTCCATTTCGACTCATTCTTTTTTATGAA
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 6.
CP124714.1:87529881-87529900
TGGGAATGGGGGAGGTATTTTGATTGATGG87529881CTTTGGGGAAATTGGGTTTTTTCTTTGATTTAGAGACATTTTCATCAACC
Galeopsis tetrahit genome assembly, chromosome: 6.
OY776124.1:80875051-80875070
AGTGTCTGCACCCAGATGTCATACAAAATA80875051CTTTGGGGAAATTGGGTTTTTTTTTTCCCAGTAATTAACTTAGAGAGGGT
Notocelia uddmanniana genome assembly, chromosome: 5.
LR991057.1:29247032-29247051
ATAATAGAGAGTTGTGGGTTAAGATCGTGA29247032CTTTGGGGAAATTGGGTTTTGGAGAATACCTGGTCAAGAGAGAAGCAGTT
Poecilobothrus nobilitatus genome assembly, chromosome: 3.
OX352774.1:179344845-179344864
GTTTTGGAGATAAGGATATGAAAAAGATTA179344845CTTTGGGGAAATTGGGTTTTTGGGATAATTAAGATAATGAAGGATAACGA
Cerastis leucographa genome assembly, chromosome: 16.
OY720361.1:7742350-7742369
AAGATAATCAACATTTCACTTATGTCCGGA7742350CTTTGGGGAAATTGGGTTTTTCCCAATGTTAAGATTTAGGCGTTCGTGGT
Labrus bergylta genome assembly, chromosome: 4.
OZ005712.1:6627220-6627239
GTAAAACATTTTTTTAGTGACAAATCAATT6627220AAAACCCAATTTCCCCAAAGCGTTAAACATTCCCATCTGATACTCTGCAA
Sequence 2 from patent US 6211430.
AR145378.1:32-51
ATCTAAAGAGCACGAAGAGTACGAGAAAGA32AAAACCCAATTTCCCCAAAGGGGAAAAGCCCAAAGAGCACGAGAAACATG
Sequence 2 from patent US 6211430.
AR145378.1:200-219
ATCGAAGGAGCACGAAGAGTACGAGAAAGA200AAAACCCAATTTCCCCAAAGGGGAAAAGCCTAAAGAGCATGAGAAACACG
Sequence 3 from patent US 6211430.
AR145379.1:2986-3005
ATCGAAGGAGCACGAAGAGTACGAGAAAGA2986AAAACCCAATTTCCCCAAAGGGGAAAAGCCCAAAGAGCACGAGAAACATG
Sequence 3 from patent US 6211430.
AR145379.1:3154-3173
ATTGAAGGAGCACGAAGAGTACGAGAAAGA3154AAAACCCAATTTCCCCAAAGGGGAAAAGCCTAAAGAGCACGAGAAACACG
CM057E05 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence.
DR457651.1:206-225
ATCGAAGGAGCACGAAGAGTACGAGAAAGA206AAAACCCAATTTCCCCAAAGGGGAAAAGCCTAAAGAGCATGAGAAACACG
GH_TMIRS_158_A07_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequence.
DW511904.1:143-162
ATCGAAGGAGCACGAAGAGTACGAGAAAGA143AAAACCCAATTTCCCCAAAGGGGAAAAGCCTAAAGAGCACGAGAAACACG
EST447 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 6-g2 5', mRNA sequence.
EE592845.1:702-721
ATCGAAGGAGCACGAAGAGTACGAGAAAGA702AAAACCCAATTTCCCCAAAGGGGAAAAGCCCAAAGAGCACGAGAAACATG
EST447 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 6-g2 5', mRNA sequence.
EE592845.1:870-889
ATCGAAGGAGCACGAAGAGTACGAGAAAGA870AAAACCCAATTTCCCCAAAGGGGAAAAGCCTAAAGAGCACGAGAAACACG
EST457 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 6-h1 5', mRNA sequence.
EE592855.1:67-86
ATCGAAGGAGCACGAAGAGTACGAGAAAGA67AAAACCCAATTTCCCCAAAGGGGAAAAGCCTAAAGAGCACGAGAAACACG
EST000885 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 04-H03 5', mRNA sequence.
GR707685.1:102-121
ATCGAAGGAGCACGAAGAGTACGAGAAAGA102AAAACCCAATTTCCCCAAAGGGGAAAAGCCTAAAGAGCACGAGAAACACG
EST002360 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 09-M24 5', mRNA sequence.
GR709160.1:96-115
ATTGAAGGAGCACGAAGAGTACGAGAAAGA96AAAACCCAATTTCCCCAAAGGGGAAAAGCCTAAAGAGCACGAGAAACACG
EST002552 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 10-J08 5', mRNA sequence.
GR709352.1:268-287
ATCGAAGGAGCACGAAGAGTACGAGAAAGA268AAAACCCAATTTCCCCAAAGGGGAAAAGCCCAAAGAGCACGAGAAACATG
EST002552 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 10-J08 5', mRNA sequence.
GR709352.1:436-455
ATTGAAGGAGCACGAAGAGTACGAGAAAGA436AAAACCCAATTTCCCCAAAGGGGAAAAGCCTAAAGAGCACGAGAAACACG
EST004215 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 16-N22 5', mRNA sequence.
GR711015.1:684-703
ATCGAAGGAGCACGAAGAGTACGAGAAAGA684AAAACCCAATTTCCCCAAAGGGGAAAAGCCCAAAGAGCACGAGAAACATG
EST004554 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 18-B11 5', mRNA sequence.
GR711354.1:607-626
ATCGAAGGAGCACGAAGAGTACGAGAAAGA607AAAACCCAATTTCCCCAAAGGGGAAAAGCCCAAAGAGCACGAGAAACATG
EST004554 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 18-B11 5', mRNA sequence.
GR711354.1:775-794
ATTGAAGGAGCACGAAGAGTACGAGAAAGA775AAAACCCAATTTCCCCAAAGGGGAAAAGCCTAAAGAGCACGA
EST005399 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 20-N20 5', mRNA sequence.
GR712199.1:300-319
ATCGAAGGAGCACGAAGAGTACGAGAAAGA300AAAACCCAATTTCCCCAAAGGGGAAAAGCCCAAAGAGCACGAGAAACATG
EST005795 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 22-E17 5', mRNA sequence.
GR712595.1:677-696
ATCGAAGGAGCACGAAGAGTACGAGAAAGA677AAAACCCAATTTCCCCAAAGGGGAAAAGCCCAAAGAGCACGAGAAACATG
EST007113 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 33-O19 5', mRNA sequence.
GR713913.1:413-432
ATCGAAGGAGCACGAAGAGTACGAGAAAGA413AAAACCCAATTTCCCCAAAGGGGAAAAGCCCAAAGAGCACGAGAAACATG
EST007113 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 33-O19 5', mRNA sequence.
GR713913.1:581-600
ATCGAAGGAGCACGAAGAGTACGAGAAAGA581AAAACCCAATTTCCCCAAAGGGGAAAAGCCTAAAGAGCACGAGAAACACG
EST007746 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 35-N15 5', mRNA sequence.
GR714546.1:47-66
ATTGAAGGAGCACGAAGAGTACGAGAAAGA47AAAACCCAATTTCCCCAAAGGGGAAAAGCCTAAAGAGCACGAGAAACACG
EST007906 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 36-H02 5', mRNA sequence.
GR714706.1:847-866
ATCGAAGGAGCACGAAGAGTACGAGAAAGA847AAAACCCAATTTCCCCAAAGGGGAAAAGCCCAAAGAGCACGAGAAACATG
EST008379 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 38-H22 5', mRNA sequence.
GR715179.1:481-500
ATCGAAGGAGCACGAAGAGTACGAGAAAGA481AAAACCCAATTTCCCCAAAGGGGAAAAGCCCAAAGAGCACGAGAAACATG
EST008379 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 38-H22 5', mRNA sequence.
GR715179.1:649-668
ATTGAAGGAGCACGAAGAGTACGAGAAAGA649AAAACCCAATTTCCCCAAAGGTGAAAAGCCTAAAGAGCACGAGAAACACG
EST008963 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 40-N13 5', mRNA sequence.
GR715763.1:606-625
ATCGAAGGAGCACGAAGAGTACGAGAAAGA606AAAACCCAATTTCCCCAAAGGGGAAAAGCCCAAAGAGCACGAGAAACATG
EST008963 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 40-N13 5', mRNA sequence.
GR715763.1:774-793
ATCGAAGGAGCACGAAGAGTACGAGAAAGA774AAAACCCAATTTCCCCAAAGGGGAAAAGCCTAAAGAGCACGAGAAACACG
EST010014 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 45-K20 5', mRNA sequence.
GR716814.1:77-96
ATTGAAGGAGCACGAAGAGTACGAGAAAGA77AAAACCCAATTTCCCCAAAGGGGAAAAGCCTAAAGAGCACGAGAAACACG
EST010034 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 45-L19 5', mRNA sequence.
GR716834.1:83-102
ATCGAAGGAGCACGAAGAGTACGAGAAAGA83AAAACCCAATTTCCCCAAAGGGGAAAAGCCCAAAGAGCACGAGAAACATG
EST010034 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 45-L19 5', mRNA sequence.
GR716834.1:251-270
ATCGAAGGAGCACGAAGAGTACGAGAAAGA251AAAACCCAATTTCCCCAAAGGGGAAAAGCCTAAAGAGCACGAGAAACACG
A06-GC4142 Gossypium barbadense L. line Hai7124 6 to 24 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK801676.1:717-736
ATCGAAGGAGCACGAAGAGTACGAGAAAGA717AAAACCCAATTTCCCCAAAGGGGAAAAGCCCAAAGAGCACGAGAAACATG
E10-GC2869 Gossypium barbadense L. line Hai7124 6 to 24 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK802880.1:717-736
ATCGAAGGAGCACGAAGAGTACGAGAAAGA717AAAACCCAATTTCCCCAAAGG
Solanum lycopersicum strain Heinz 1706 chromosome 1 clone sle-56a7 map 1, complete sequence.
AC245991.5:18430-18449
TTCATAAAAAAGAATGAGTCGAAATGGAAA18430AAAACCCAATTTCCCCAAAGAAATACACAAATTAGCAAAGAAAATGAAAT
Solanum lycopersicum Micro-Tom DNA, chromosome 1, draft genome sequence.
AP028935.1:32753491-32753510
TTCATAAAAAAGAATGAGTCGAAATGGAAA32753491AAAACCCAATTTCCCCAAAGAAATACACAAATTAGCAAAGAAAATGAAAT
Solanum lycopersicum cultivar I-3 chromosome 1.
CP023757.1:29435148-29435167
TTCATAAAAAAGAATGAGTCGAAATGGAAA29435148AAAACCCAATTTCCCCAAAGAAATACACAAATTAGCAAAGAAAATGAAAT
Gossypium raimondii isolate D5-4 chromosome D5_03.
CP032555.1:3435839-3435858
ATCGAAGGAGCACGAAGAGTACGAGAAAGA3435839AAAACCCAATTTCCCCAAAGGGGAAAAGCCCAAAGAGCACGAGAAACATG
Gossypium raimondii isolate D5-4 chromosome D5_03.
CP032555.1:3436007-3436026
ATCGAAGGAGCACGAAGAGTACGAGAAAGA3436007AAAACCCAATTTCCCCAAAGGGGAAAAGCCTAAAGAGCACGAGAAACACG
Gossypium raimondii isolate D5-4 chromosome D5_03.
CP032555.1:3458707-3458726
ATCGAAGGAGCACGAAGAGTACGAGAAAGA3458707AAAACCCAATTTCCCCAAAGGGGAAAAGCCCAAAGAGCACGAGAAACATG
Gossypium raimondii isolate D5-4 chromosome D5_03.
CP032555.1:3458875-3458894
ATCGAAGGAGCACGAAGAGTACGAGAAAGA3458875AAAACCCAATTTCCCCAAAGGGGAAAAGCCTAAAGAGCACGAGAAACACG
Gossypium turneri isolate D10-2 chromosome D10_03.
CP032573.1:3388947-3388966
ATAGAAGGAGCATGAAGAGTACGAGAAAGA3388947AAAACCCAATTTCCCCAAAGGGGAAAAGTCCAAAGAGCACGAGAAACAGG
Gossypium turneri isolate D10-2 chromosome D10_03.
CP032573.1:3389450-3389469
ATCGAAGGAGCACGAAGCGTACGAGAAAGA3389450AAAACCCAATTTCCCCAAAGGGGAAAAGCCTAAAGAGCACGAGAAACACA
Gossypium turneri isolate D10-2 chromosome D10_03.
CP032573.1:3400990-3401009
ATCGAAGGAGCGCGAAGAGTACGAGAAAGA3400990AAAACCCAATTTCCCCAAAGGGGAAAAGCCCAAAGAGCACGAGAAACATG
Solanum lycopersicum chromosome ch01, complete genome.
HG975513.1:29435201-29435220
TTCATAAAAAAGAATGAGTCGAAATGGAAA29435201AAAACCCAATTTCCCCAAAGAAATACACAAATTAGCAAAGAAAATGAAAT
Solanum lycopersicum genome assembly, chromosome: 1.
OU640344.1:32943348-32943367
TTCATAAAAAAGAATGAGTCGAAATGGAAA32943348AAAACCCAATTTCCCCAAAGAAATACACAAATTAGCAAAGAAAATGAAAT
Viscum album genome assembly, chromosome: B1.
OY728167.1:288392499-288392518
GACATGAATTGACCCCCTCCCCCCACACTT288392499AAAACCCAATTTCCCCAAAGTTGAATTTCAAAGTGGAGAAGAACAATTAA
Gossypium barbadense FbLate-2 gene, complete cds.
U34401.1:987-1006
ATCGAAGGAGCACGAAGAGTACGAGAAAGA987AAAACCCAATTTCCCCAAAGGGGAAAAGCCCAAAGAGCACGAGAAACATG
Gossypium barbadense FbLate-2 gene, complete cds.
U34401.1:1155-1174
ATTGAAGGAGCACGAAGAGTACGAGAAAGA1155AAAACCCAATTTCCCCAAAGGGGAAAAGCCTAAAGAGCACGAGAAACACG
Rhagium mordax genome assembly, chromosome: 2.
OY796657.1:82866913-82866932
TTTTTTGATTACCTAATATCTAAAATGCAC82866913AAAACCCAATTTCCCCAAAGAAAATTCCTCAAACTGTATATCGAAATTCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTTGGGGAAATTGGGTTTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTTGGGGAAATTGGGTTTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.446 | 0.437 | search_plus_done; http://172.18.8.135:50400/match?q=CTTTGGGGAAATTGGGTTTT&k=0&no_gap=0&offset=0&limit=50
3.256 | 2.809 | search_minus_done; http://172.18.8.135:50400/match?q=AAAACCCAATTTCCCCAAAG&k=0&no_gap=0&offset=0&limit=39
3.287 | 0.031 | cgi_end;

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