GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 10:34:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

454GmaGlobSeed73940 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK339308.1:182-206
CTTTGCTAGGGAGCTTAGTTTTCCATCCTT182CTTTTGCTGGAGAAGATAAGCCAATATATCATTCAAAGAACTCCCTTGAAGATCC
GC_Bb135O15.R GC_Bb Glycine cyrtoloba genomic 3', genomic survey sequence.
HN994140.1:35-59
NNCCCATCCCGGGNGTNNNNTNNCCTCCTT35CTTTTGCTGGAGAAGATAAGCCAATATATCATTCAAAGAACTCCCTTGAAGATCA
Sequence 84520 from patent US 9029636.
HK993583.1:1191-1215
GGATCTTCAAGGGAGTTCTTTGAATGATAT1191ATTGGCTTATCTTCTCCAGCAAAAGAAGGATGGAAAACTAAGCTCCCTAGCAAAG
GD_TBa064D22.R GD_TBa Glycine dolichocarpa genomic 3', genomic survey sequence.
HN549962.1:256-280
TGATCTGCAAGGGAGTTCTTTGAATGATAT256ATTGGCTTATCTTCTCCAGCAAAAGAAGGATGGAAAACTAANCTCCCTANCAAAG
GT_DBa142J22.F GT_DBa Glycine tomentella genomic 5', genomic survey sequence.
HN605335.1:315-339
TGATCTTCAAGGTAGTTCTTTGAATGATAT315ATTGGCTTATCTTCTCCAGCAAAAGAAGGATGGAAAACTAAGCTCCGTAGCACAG
GS_Ba076P22.R GS_Ba Glycine syndetika genomic 3', genomic survey sequence.
HN795315.1:253-277
TGATCTGCAAGGGAGTTCTTTGAATGATAT253ATTGGCTTATCTTCTCCAGCAAAAGAAGGATGGAAAACTAAGCTCCCTAGCAAAG
Glycine max cultivar Williams 82 chromosome 11.
CP126436.1:7778071-7778095
GGATCTTCAAGGGAGTTCTTTGAATGATAT7778071ATTGGCTTATCTTCTCCAGCAAAAGAAGGATGGAAAACTAAGCTCCCTAGCAAAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTTTTGCTGGAGAAGATAAGCCAAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTTTGCTGGAGAAGATAAGCCAAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.210 | 0.201 | search_plus_done; http://172.18.8.135:50400/match?q=CTTTTGCTGGAGAAGATAAGCCAAT&k=0&no_gap=0&offset=0&limit=50
0.378 | 0.168 | search_minus_done; http://172.18.8.135:50400/match?q=ATTGGCTTATCTTCTCCAGCAAAAG&k=0&no_gap=0&offset=0&limit=48
0.381 | 0.003 | cgi_end;

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