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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-17 08:17:59, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Acomys dimidiatus genome assembly, chromosome: 12.
OU015385.1:16767350-16767368
CAGAACTGGCTCCTGCTATTAATTTCGATG16767350CTTTTTCCTAGCATGTTTGAAATTGTTAGTGGAATACGCTGTTTTATAG
Rhinolophus hipposideros genome assembly, chromosome: 4.
OZ077421.1:45924024-45924042
ATATATCCATAATTTGGTAGATTTGTCAGT45924024CTTTTTCCTAGCATGTTTGCACAGCTTTAAACTTATTGTACATACACTT
Cucumis melo subsp. agrestis EST, clone A_18-E09-M13R.
AM729469.2:602-620
GTTATTTCGCTTTTTTTGTTTTTCTTGCCC602CTTTTTCCTAGCATGTTTGATATTATTAAATATTTCTTAATATCTTTGA
Cucumis melo isolate PI 511890 chromosome 4.
CP136104.1:2208017-2208035
GTTATTTCGCTTTTTTTGTTTTTCTTGCCC2208017CTTTTTCCTAGCATGTTTGATATTATTAAAGATTTCTTAATATCTTTGA
Sorghum bicolor cultivar Huandiaonuo chromosome 5.
CP137839.1:75686424-75686442
TTTCTAATTAATGAGAATTCTAGCATTTAT75686424CTTTTTCCTAGCATGTTTGATGAAAATTAACATGGAGTCTCCATTTGGG
Sorghum bicolor cultivar Huandiaonuo chromosome 5.
CP137839.1:75698462-75698480
TTTCTAATTAATGAGAATTCTAGCATTTAT75698462CTTTTTCCTAGCATGTTTGATGAAAATTAACATGGAGTCTCCATTTGGG
Sorghum bicolor cultivar CHBZ chromosome 05.
CP142763.1:75804191-75804209
TTTCTAATTAATGAGAATTCTAGCATTTAT75804191CTTTTTCCTAGCATGTTTGATGAAAATTAACATGGAGTCTCCATTTGGG
Sorghum bicolor cultivar CHBZ chromosome 05.
CP142763.1:75816230-75816248
TTTCTAATTAATGAGAATTCTAGCATTTAT75816230CTTTTTCCTAGCATGTTTGATGAAAATTAACATGGAGTCTCCATTTGGG
Sorghum bicolor cultivar CHBZ chromosome 05.
CP142763.1:75828445-75828463
TTTCTAATTAATGAGAATTCTAGCATTTAT75828445CTTTTTCCTAGCATGTTTGATGAAAATTAACATGGAGTCTCCATTTGGG
Sorghum bicolor cultivar CHBZ chromosome 05.
CP142763.1:75841217-75841235
TTTCTAATTAATGAGAATTCTAGCATTTAT75841217CTTTTTCCTAGCATGTTTGATGAAAATTAACATGGAGTCTCCATTTGGG
Sorghum bicolor cultivar CHBZ chromosome 05.
CP142763.1:75853256-75853274
TTTCTAATTAATGAGAATTCTAGCATTTAT75853256CTTTTTCCTAGCATGTTTGATGAAAATTAACATGGAGTCTCCATTTGGG
Sorghum bicolor cultivar CHBZ chromosome 05.
CP142763.1:75865471-75865489
TTTCTAATTAATGAGAATTCTAGCATTTAT75865471CTTTTTCCTAGCATGTTTGATGAAAATTAACATGGAGTCTCCATTTGGG
Sorghum bicolor subsp. drummondii cultivar S722 chromosome 4.
CP152396.1:74741084-74741102
TTTCTAATTAATGAGAATTCTAGCATTTAT74741084CTTTTTCCTAGCATGTTTGATGAAAATTAACATGGAGTCTCCATTTGGG
Sorghum bicolor subsp. drummondii cultivar S722 chromosome 4.
CP152396.1:74753119-74753137
TTTCTAATTAATGAGAATTCTAGCATTTAT74753119CTTTTTCCTAGCATGTTTGATGAAAATTAACATGGAGTCTCCATTTGGG
Sorghum bicolor subsp. drummondii cultivar S722 chromosome 4.
CP152396.1:74776824-74776842
TTTCTAATTAATGAGAATTCTAGCATTTAT74776824CTTTTTCCTAGCATGTTTGATGAAAATTAACATGGAGTCTCCATTTGGG
Cucumis melo genomic scaffold, anchoredscaffold01596.
LN681824.1:2412155-2412173
GTTATTTCGCTTTTTTTGTTTTTCTTGCCC2412155CTTTTTCCTAGCATGTTTGATATTATTAAAGATTTCTTAATATCTTTGA
Cucumis melo genomic chromosome, chr_4.
LN713258.1:2412155-2412173
GTTATTTCGCTTTTTTTGTTTTTCTTGCCC2412155CTTTTTCCTAGCATGTTTGATATTATTAAAGATTTCTTAATATCTTTGA
Chionographis japonica genome assembly, chromosome: 6.
OX393554.1:34852213-34852231
TTATCGATCGACCATCCATAGTAGCCATTA34852213CTTTTTCCTAGCATGTTTGATGATCATATAAGTTTTAAAATTTATTCAA
Cratoneuron filicinum genome assembly, chromosome: 3.
OZ203570.1:29602980-29602998
TCTACTTCAATCAACGGTAGTGGTGATTGC29602980CTTTTTCCTAGCATGTTTGATTATTTATACGGTTCTAGAAGAAAAACAT
Stegodyphus dumicola isolate Sdum_Otavi_A_Nest chromosome 7.
CP160605.1:48222773-48222791
ATTTGAATGTTTTACTTCTGATACTAGAAT48222773CTTTTTCCTAGCATGTTTGTCTTCCCTTTATTTTCTCTACTTCTCACTA
Fragum fragum genome assembly, chromosome: 9.
OX336373.1:6734919-6734937
ACATTTTTTAGATATTTTTTCGTGTGACTG6734919CTTTTTCCTAGCATGTTTGTAGGTAATAGTGGTTATTTCACACACAGTG
Mythimna lalbum genome assembly, chromosome: 25.
OX439370.1:15470569-15470587
CCAGGTTAATTTGCAATAAAGTACAGTAAC15470569CTTTTTCCTAGCATGTTTGCGTAAATACCTCAGAATCGAAAAACAAACA
Drosophila histrio genome assembly, chromosome: 3.
OY729166.1:13470844-13470862
TCTACGCTTATTTGTCTTAACTTTTGATTT13470844CTTTTTCCTAGCATGTTTGCTCTGTTTTGTCGTTGTTGTCGTTGTTGCC
Stenurella melanura genome assembly, chromosome: 6.
OY757314.1:39980334-39980352
TTTATATCACCTTTAAAACCCATGTTGATT39980334CTTTTTCCTAGCATGTTTGGTTTTCGAGCAATTCAATTTTTTCTATAGG
Stenurella melanura genome assembly, chromosome: 6.
OY757314.1:52553671-52553689
TTTATATCCCCTTTAAAACCCATTTTGATT52553671CTTTTTCCTAGCATGTTTGGTTTTCGAGCAATTCAATTTTTTCTACAGG
Rhyacionia pinicolana genome assembly, chromosome: 7.
OZ206437.1:26219830-26219848
GCAGTCTATATTATCGCGAATGTAAGTTCT26219830CTTTTTCCTAGCATGTTTGAGAGAGCATAGGTTACAGGTAAAACAATGG
Erithacus rubecula genome assembly, chromosome: 1.
LR812103.1:26416775-26416793
TGTATTCAGATACCTAAATTCCCAGCTGGG26416775CTTTTTCCTAGCATGTTTGTCAGCACTGGAACAAGTGCCACAAGAGGCT
Valencia hispanica genome assembly, chromosome: 10.
OY747709.1:4167281-4167299
TTTACGTTTGTGACGGTAGGACAGAACAGA4167281CTTTTTCCTAGCATGTTTGCCAAACAGCTGGTTGGACACTGGATGGGGT
Acomys kempi genome assembly, chromosome: 9.
OU015363.1:101858606-101858624
TTTTCTTATAGTGATGGGGGAGAGGAGCCT101858606CAAACATGCTAGGAAAAAGGCCCTATTAGGAAACTACATCACCAGCAGG
Acomys percivali genome assembly, chromosome: 9.
OU015750.1:101542705-101542723
TTTTCTTATAGCGATGGGGAAGAGGGGCCT101542705CAAACATGCTAGGAAAAAGGCCATATCAAGGGAACTACATGGCCAGCAG
Acomys minous genome assembly, chromosome: 3.
OZ186477.1:129331965-129331983
TTTTCTTATAGCGATGGGGAAGAGGAGCCT129331965CAAACATGCTAGGAAAAAGGCCCTATCAGGAAACTACATCACCAGCAGG
104_319_10525986_5_30099 Sorghum methylation filtered library (LibID: 104) Sorghum bicolor genomic clone 10525986, genomic survey sequence.
CW069602.1:397-415
CCCAAATGGAGACTCCATGTTAATTCTCAT397CAAACATGCTAGGAAAAAGATAAATGCTAGAATTTCCATTAATCAGAAA
fsbb001f070e10k0 Sorghum methylation filtered library (LibID: 104) Sorghum bicolor genomic clone fsbb001f070e10, genomic survey sequence.
CW386396.1:315-333
CCCAAATGGAGACTCCATGTTAATTCTCAT315CAAACATGCTAGGAAAAAGATAAATGCTAGAATTTCCATTAATCAGAAA
Convolvulus arvensis genome assembly, chromosome: 24.
OZ120391.1:36766271-36766289
AATGTTCAATTACCATCATTTTTTGTATGT36766271CAAACATGCTAGGAAAAAGCAAGCATGTTGACATCTCTCAAGCATTTTA
Iris foetidissima genome assembly, chromosome: 11.
OZ123571.1:152905576-152905594
GTAGTTATTTTATTTTCATATCATGGCACC152905576CAAACATGCTAGGAAAAAGAGAAAACAAGGAGAATGTTCTTCAAGTCAA
Tamarix gallica genome assembly, chromosome: 5.
OZ123705.1:12158397-12158415
GAGGAGTTCCTGAGTATTGAGATGAAAATT12158397CAAACATGCTAGGAAAAAGGGAGGTTATAAGAGGGCTTCATTGCCAACT
Ranunculus sceleratus genome assembly, chromosome: 1.
OZ205663.1:38043484-38043502
CGTACCAGAGACTAGTCACCGAGATGTTCA38043484CAAACATGCTAGGAAAAAGAGTCGAAGTATACGTTGACGACATGATCGT
Stegodyphus tentoriicola isolate Sten_Tierberg_A chromosome 3.
CP160585.1:62677217-62677235
TAGTGAGAAGTAGAGAAAATAAAGGGAAGA62677217CAAACATGCTAGGAAAAAGATTCTAGTATCAGAAGTAAAACATTCAAAT
Anopheles marshallii genome assembly, chromosome: 3.
OX030904.1:62912173-62912191
AACAACTAATATTAGCACAGAATGTATAAG62912173CAAACATGCTAGGAAAAAGGTTAAAATAAGAGAAATAAATATGAACAAT
Lacanobia oleracea genome assembly, chromosome: 2.
OX493387.1:26445854-26445872
GCTCCTCAATATCGATTTAAAACGTTTTCT26445854CAAACATGCTAGGAAAAAGCATTATTTTGACCACCTTTTTTGAGATAAA
Lacanobia oleracea genome assembly, chromosome: 2.
OX493387.1:27313063-27313081
GCTCCTCAATATCGATTTAAAACGTTTTCT27313063CAAACATGCTAGGAAAAAGCATTATTTTGACCACCTTTTTTGAGATAAA
Stenurella melanura genome assembly, chromosome: 5.
OY757313.1:37034393-37034411
CCTATAGAAAAAATTGAATTGCTCGAAAAC37034393CAAACATGCTAGGAAAAAGAATCAAAATGGGTTTTAAAGGGGATATAAA
Ceratothoa steindachneri genome assembly, chromosome: 9.
OZ018325.1:58683344-58683362
TTCCCGTCAATAACAAGTTACCTGTATAAA58683344CAAACATGCTAGGAAAAAGCAATTATGTTGAATATTCCTTAATCTAAAT
Chaetopelma lymberakisi genome assembly, chromosome: 3.
OZ197705.1:146614853-146614871
GAATGTGACAATAATTAAAGGGAAACTGAG146614853CAAACATGCTAGGAAAAAGCAACATGGCACTTTTTTTTCACACGCTGTG
Littorina littorea genome assembly, chromosome: 8.
OZ201057.1:17714486-17714504
TGACTGAGTTTGCCAGTGTTATGGCTGTCC17714486CAAACATGCTAGGAAAAAGGTGATAATCTTGGTCTACATGACTTTTTTT
Psittacula echo genome assembly, chromosome: Z.
OY725424.1:105226054-105226072
AGCCGTGAGGAGCCCTTGCAAATGTGTTAG105226054CAAACATGCTAGGAAAAAGGCTTGATTTCTGGAACATGTCACCAGGCTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTTTTCCTAGCATGTTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTTTTCCTAGCATGTTTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.397 | 0.388 | search_plus_done; http://172.18.8.135:50800/match?q=CTTTTTCCTAGCATGTTTG&k=0&no_gap=0&offset=0&limit=50
0.590 | 0.193 | search_minus_done; http://172.18.8.135:50800/match?q=CAAACATGCTAGGAAAAAG&k=0&no_gap=0&offset=0&limit=22
0.602 | 0.012 | cgi_end;

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