GGGenome | Results

データベース：

ミスマッチ/ギャップを許容ミスマッチのみ許容：塩基まで (検索する配列長の25%まで)
双方向を検索＋方向のみ検索－方向のみ検索

2025-04-03 11:48:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Thalassophryne amazonica genome assembly, chromosome: 20.
LR722985.1:46408523-46408542

CAACACCTTGGTGCTCCCTTTTCTCACCCA46408523CTTTTTCCTTCTCGCTGTCGTCGCTTCTCTTGTTGATGTCAGCTACTGCC

Sequence 2876 from patent US 9096865.
HL038521.1:67-86

TTACAAATTAACATCTCTTCCTTCGCAACA67CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCAG

Sequence 2876 from Patent EP2440033.
JC300430.1:67-86

TTACAAATTAACATCTCTTCCTTCGCAACA67CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCAG

Sequence 2876 from patent US 10006040.
MI841375.1:67-86

TTACAAATTAACATCTCTTCCTTCGCAACA67CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCAG

Sequence 2876 from patent US 10791690.
MV738696.1:67-86

TTACAAATTAACATCTCTTCCTTCGCAACA67CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCAG

Sequence 2876 from patent US 11286495.
MY951883.1:67-86

TTACAAATTAACATCTCTTCCTTCGCAACA67CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCAG

UCRCS04_0005B10_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005B10, mRNA sequence.
CN184155.1:29-48

GCGTATTAACATCTCTTCCTTCGCAACA29CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCGG

UCRCS05_0004P24_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004P24, mRNA sequence.
CN187783.1:33-52

TGTAAAATTAACATCTCTTCCTTCGCAACA33CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCGG

UCRCS05_0006F10_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006F10, mRNA sequence.
CN188576.1:23-42

GCGGTTCTCTTCCTTCGCAACA23CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCGG

UCRCS06_0004K23_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0004K23, mRNA sequence.
CN191162.1:27-46

GAATTAACATCTCTTCCTTCGCAACA27CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCGG

UCRCS06_0006G09_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006G09, mRNA sequence.
CN192133.1:15-34

CTCTTCCTTGCACA15CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCGG

UCRPT01_0008K09_r Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0008K09, mRNA sequence.
CV706642.1:22-41

AACATCTCTTCCTTCGCAACA22CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCAG

UCRPT01_0009O23_r Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0009O23, mRNA sequence.
CV707517.1:17-36

CTCTTCCTTCGCAACA17CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCAG

UCRCS09_7A12_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-7A12-B24-1-5.b, mRNA sequence.
CX053610.1:14-33

TTCCTTCGCAACA14CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCGG

UCRCS08_20A03_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-20A03-B6-1-5.g, mRNA sequence.
CX071129.1:17-36

CTCTTCCTTCGCAACA17CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCGG

UCRPT02_75G04_g Poncirus trifoliata Roots with Iron Deficiency - UCRPT02-UCR1 Citrus trifoliata cDNA clone UCRPT02-75G04-N8-6.g, mRNA sequence.
CX644707.1:20-39

CATCTCTTCCTTCGCAACA20CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTAGTGGCAG

Citrus unshiu mRNA, clone: FBI1182, 5'-end sequence, expressed in floral bud.
DC889225.1:25-44

ATTAACATCTCTTCCTTCGCAACA25CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCAG

IC0AAA15DC02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY264890.1:29-48

ACAAATTAACATCTCTTCCTTCGCAACA29CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCGG

IC0AAA28DD07RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY270114.1:36-55

TTACAAATTAACATCTCTTCCTTCGCAACA36CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCGG

IC0AAA29BG02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY271458.1:28-47

CAAATTAACATCTCTTCCTTCGCAACA28CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCAG

IC0AAA29DC03RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY271592.1:28-47

CAAATTTACATCTCTTCCTTCGCAACA28CTTTTTCCTTCTCGCTGTCGTCGTAATGGCAGGTACCGGAGTGGTGGCAG

IC0AAA41BB01RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY276479.1:35-54

TTACAAATTAACATCTCTTCCTTCGCAACA35CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCAG

IC0AAA42DB09RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY277046.1:78-97

TTACAAATTAACATCTCTTCCTTCGCAACA78CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCGG

IC0AAA44BE04RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY277621.1:12-31

CCTTCGTAACA12CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCGG

IC0AAA60DH10RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY284294.1:30-49

TACAAATTAACATCTCTTCCTTCGCAACA30CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCAG

IC0AAA73BA10RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY289677.1:30-49

TACAAATTAACATCTCTTCCTTCGCAACA30CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCGG

IC0AAA82AE04RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY293191.1:27-46

AAATTAACATCTCTTCCTTCCCAACA27CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCGG

IC0AAA86AD11RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY294644.1:32-51

CTTATAATTAACATCTCTTCCTTCGCAACA32CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCGG

IC0AAA86DB12RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY294895.1:27-46

AAATTAACATCTCTTCCTTCGCAACA27CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCAG

KN0AAQ12YC09RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY301094.1:28-47

CAAATTAACATCTCTTCCTTCGCAACA28CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCAG

KN0AAQ2YF05RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY302204.1:28-47

CAAATTAACATCTCTTCCTTCGCAACA28CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCGG

KN0AAQ4YC02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY302849.1:30-49

TACAAATTAACATCTCTTCCTTCGCAACA30CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCAG

CS00-C1-101-031-D01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
EY661272.1:41-60

GTACAAATTAACATCTCTTCCTTCGCAACA41CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCGG

CS00-C1-102-088-C11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
EY672874.1:72-91

GTACAAATTAACATCTCTTCCTTCTTCACA72CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCGG

CS00-C1-650-026-H08-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY681887.1:28-47

CCACGCGTCCGCTCTTCCTTCGCAACA28CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCGG

CR05-C1-100-079-A07-CT.F Mandarin leaf, greenhouse plant Citrus reticulata cDNA, mRNA sequence.
EY764331.1:78-97

TTACAAATTAACATCTCTTCCTTCGCAACA78CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCGG

CR05-C1-102-010-H05-CT.F Mandarin leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus reticulata cDNA, mRNA sequence.
EY767154.1:39-58

CCGCAAATTAACATCTCTTCCTTCGCAACA39CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCAG

CR05-C1-103-006-E11-CT.F Mandarin leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus reticulata cDNA, mRNA sequence.
EY775724.1:116-135

TTACAAATTAACATCTCTTCCTTCGCAACA116CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCAG

PT11-C1-900-008-D01-CT.F Poncirus trifoliata leaf, greenhouse plant Citrus trifoliata cDNA, mRNA sequence.
EY810504.1:37-56

GTCCGAATTAACATCTCTTCCTTCGCAACA37CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTAGTGGCAG

PT11-C1-900-029-H07-CT.F Poncirus trifoliata leaf, greenhouse plant Citrus trifoliata cDNA, mRNA sequence.
EY812306.1:33-52

ACGCGTCCGAACATCTCTTCCTTCGCAACA33CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTAGTGGCAG

PT11-C1-900-049-G04-CT.F Poncirus trifoliata leaf, greenhouse plant Citrus trifoliata cDNA, mRNA sequence.
EY814364.1:53-72

GTACAAATTAACATCTCTTCCTTCGCAACA53CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTAGTGGCAG

PT11-C1-901-060-F09-CT.F Poncirus trifoliata leaf, infected with CTV Citrus trifoliata cDNA, mRNA sequence.
EY824136.1:146-165

TTACAAATTAACATCTCTTCCTTCGCAACA146CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTAGTGGCAG

PT11-C1-901-099-D12-CT.F Poncirus trifoliata leaf, infected with CTV Citrus trifoliata cDNA, mRNA sequence.
EY827495.1:34-53

CTTATAATTAACATCTCTTCCTTCGCAACA34CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTACTGGCGG

PT11-C1-901-082-F04-CT.F Poncirus trifoliata leaf, infected with CTV Citrus trifoliata cDNA, mRNA sequence.
EY827685.1:33-52

ACGCGTCCGAACATCTCTTCCTTCGCAACA33CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTAGTGGCAG

CM30-C1-401-037-G08-CT.F Sweet lime leaf, infected with CiLV Citrus limettioides cDNA, mRNA sequence.
EY861300.1:13-32

TCCTTCGCAACA13CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCGG

IC0AAA44BE04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA44BE04, mRNA sequence.
FC878484.1:12-31

CCTTCGTAACA12CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCGG

IC0AAA73BA10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA73BA10, mRNA sequence.
FC880642.1:30-49

TACAATTTAACATCTCTTCCTTCGCAACA30CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCGG

IC0AAA42DB09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA42DB09, mRNA sequence.
FC880739.1:78-97

TTACAAATTAACATCTCTTCCTTCGCAACA78CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCGG

KN0AAQ2YF05RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ2YF05, mRNA sequence.
FC881500.1:28-47

CAAATTAACATCTCTTCCTTCGCAACA28CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCGG

IC0AAA60DH10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA60DH10, mRNA sequence.
FC881646.1:16-35

TCTTCCTTCGCAACA16CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCAG

IC0AAA29DC03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA29DC03, mRNA sequence.
FC883085.1:28-47

CAAATTTACATCTCTTCCTTCGCAACA28CTTTTTCCTTCTCGCTGTCGTCGTAATGGCAGGTACCGGAGTGGTGGCAG

IC0AAA15DC02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA15DC02, mRNA sequence.
FC884881.1:16-35

TCTTCCTTCGCAACA16CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCGG

IC0AAA41BB01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA41BB01, mRNA sequence.
FC885339.1:35-54

TTACAAATTAACATCTCTTCCTTCGCAACA35CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCAG

KN0AAQ4YC02RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ4YC02, mRNA sequence.
FC887779.1:16-35

TCTTCCTTCGCAACA16CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCAG

IC0AAA86AD11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA86AD11, mRNA sequence.
FC890804.1:32-51

CTTATAATTAACATCTCTTCCTTCGCAACA32CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCGG

IC0AAA28DD07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA28DD07, mRNA sequence.
FC899971.1:36-55

TTACAAATTAACATCTCTTCCTTCGCAACA36CTTTTTCCTTCTCGCTGTCGGCGTAATGGCAGGTACCGGAGTGGTGGCGG

Methanoregula formicica SMSP chromosome, complete genome.
CP003167.1:1883989-1884008

CCTCAAAACCGTAATACTGTTCTTGGCTGT1883989CTTTTTCCTTCTCGCTGTCGCCGGGTGCACATCCCCGGCCCCGTCATCTC

Data Export:

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Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTTTTCCTTCTCGCTGTCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTTTTCCTTCTCGCTGTCG | format : html | download : | debug :

0.009 | 0.009 | search_start;
3.493 | 3.484 | search_plus_done; http://172.18.8.135:50400/match?q=CTTTTTCCTTCTCGCTGTCG&k=0&no_gap=0&offset=0&limit=50
3.619 | 0.126 | search_minus_done; http://172.18.8.135:50400/match?q=CGACAGCGAGAAGGAAAAAG&k=0&no_gap=0&offset=0&limit=0
3.619 | 0.000 | cgi_end;

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